| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197103936
Identifier: 197103936
GI number: 197103936
Start: 487725
End: 488528
Strand: Direct
Name: 197103936
Synonym: PHZ_c0470
Alternate gene names: NA
Gene position: 487725-488528 (Clockwise)
Preceding gene: 197103934
Following gene: 197103938
Centisome position: 12.2
GC content: 76.74
Gene sequence:
>804_bases ATGGCCAAGACGTCGTTCCTGCACGCCGCCGTCGCAACGATCCTGCTGCTGGCCGCGGGCTGCGCCAGGGCGGGCGGGGA CGAGCCGGCCGCGATCGTGGTCGTGGCGGGCCAGTCGAACGCCCTGGGCTATGGCCTCACGGCCGCGGACCTGCCCCCTT CGCTGGCGAGCCCAGACCCGGACGTGAGGATCTGGGACGGCGCCCGCTTCCAGCCGATGGCGGCCGGCCGCAACACGGGC TTCGGGCCGCAGCCGGGGGCCTGGGGACCGGAGGCCGGGTTCGCCCGCGCCTGGCGCGCGGCCCATCCGGACGCCCCGCT CCATGTGGTGAAGTTCGCCCGCGGCTCGACCCCCTTGGCGGCGAGCCCGGGGCGGGACTGGTCGCCGGGCACGCAGGAGC TGTTCGCCGCGGCGACCACCGAGATTGAGGAAGCCAAGGCCGCGCTGGCGGTGAACGGGGGCCCGGCCCGGGTCGTCGCG ATCCTGTGGGTGCAGGGGGAGGCAGACGCCGTCGACCCCGCCAAGGCCGCCGCCTACGGGCCCAACCTGGCCGGGCTGAT CCAGGCGATCCGTCGGGACTGGTCGTCCGAGGCGCCGATCGTCGTCGGTCAGACCGGACCGGGCCTGCCGTACGCCAAGG CGGTGCGGGCCGGCCAGGCTGCGGTCGCCTCGCCCGAGGGCCGGGTCGCCGTCGTGGACACCGGCCCGCTTCCGCGCCAG GCCGACGGACTGCACATCGCCGCCGAGGGGCAGGCGCGCCTGGGCGCGGCGATGGCCGAAGCCGCCCAGCGCCTGTCGCG GTAG
Upstream 100 bases:
>100_bases AGGATGGCGGCGTCCATGGGGGCGGCGGACTAGCATGGCGGCGGGCGCGCCCCAAGGCCCCGCGATTGCCCGCCCGGGCG CGTTCCGCTAGGCCCGGTCC
Downstream 100 bases:
>100_bases GCTACCCCGCCGCCCAATCCTTCGGCCGGATCACCCTGCGGTCCGCGGCTGCCACCTCGTCGTGGTGGCGATAGGCCCAC CAGACGGCGTCCACGACCTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 267; Mature: 266
Protein sequence:
>267_residues MAKTSFLHAAVATILLLAAGCARAGGDEPAAIVVVAGQSNALGYGLTAADLPPSLASPDPDVRIWDGARFQPMAAGRNTG FGPQPGAWGPEAGFARAWRAAHPDAPLHVVKFARGSTPLAASPGRDWSPGTQELFAAATTEIEEAKAALAVNGGPARVVA ILWVQGEADAVDPAKAAAYGPNLAGLIQAIRRDWSSEAPIVVGQTGPGLPYAKAVRAGQAAVASPEGRVAVVDTGPLPRQ ADGLHIAAEGQARLGAAMAEAAQRLSR
Sequences:
>Translated_267_residues MAKTSFLHAAVATILLLAAGCARAGGDEPAAIVVVAGQSNALGYGLTAADLPPSLASPDPDVRIWDGARFQPMAAGRNTG FGPQPGAWGPEAGFARAWRAAHPDAPLHVVKFARGSTPLAASPGRDWSPGTQELFAAATTEIEEAKAALAVNGGPARVVA ILWVQGEADAVDPAKAAAYGPNLAGLIQAIRRDWSSEAPIVVGQTGPGLPYAKAVRAGQAAVASPEGRVAVVDTGPLPRQ ADGLHIAAEGQARLGAAMAEAAQRLSR >Mature_266_residues AKTSFLHAAVATILLLAAGCARAGGDEPAAIVVVAGQSNALGYGLTAADLPPSLASPDPDVRIWDGARFQPMAAGRNTGF GPQPGAWGPEAGFARAWRAAHPDAPLHVVKFARGSTPLAASPGRDWSPGTQELFAAATTEIEEAKAALAVNGGPARVVAI LWVQGEADAVDPAKAAAYGPNLAGLIQAIRRDWSSEAPIVVGQTGPGLPYAKAVRAGQAAVASPEGRVAVVDTGPLPRQA DGLHIAAEGQARLGAAMAEAAQRLSR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27003; Mature: 26871
Theoretical pI: Translated: 6.96; Mature: 6.96
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKTSFLHAAVATILLLAAGCARAGGDEPAAIVVVAGQSNALGYGLTAADLPPSLASPDP CCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCC DVRIWDGARFQPMAAGRNTGFGPQPGAWGPEAGFARAWRAAHPDAPLHVVKFARGSTPLA CEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCEEEEEECCCCCCCC ASPGRDWSPGTQELFAAATTEIEEAKAALAVNGGPARVVAILWVQGEADAVDPAKAAAYG CCCCCCCCCCHHHHHHHHHHHHHHHHEEEEECCCCEEEEEEEEECCCCCCCCCHHHHHCC PNLAGLIQAIRRDWSSEAPIVVGQTGPGLPYAKAVRAGQAAVASPEGRVAVVDTGPLPRQ CCHHHHHHHHHHCCCCCCCEEEECCCCCCCHHHHHHCCCCEEECCCCCEEEEECCCCCCC ADGLHIAAEGQARLGAAMAEAAQRLSR CCCEEEEECCCHHHHHHHHHHHHHHCC >Mature Secondary Structure AKTSFLHAAVATILLLAAGCARAGGDEPAAIVVVAGQSNALGYGLTAADLPPSLASPDP CCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCC DVRIWDGARFQPMAAGRNTGFGPQPGAWGPEAGFARAWRAAHPDAPLHVVKFARGSTPLA CEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCEEEEEECCCCCCCC ASPGRDWSPGTQELFAAATTEIEEAKAALAVNGGPARVVAILWVQGEADAVDPAKAAAYG CCCCCCCCCCHHHHHHHHHHHHHHHHEEEEECCCCEEEEEEEEECCCCCCCCCHHHHHCC PNLAGLIQAIRRDWSSEAPIVVGQTGPGLPYAKAVRAGQAAVASPEGRVAVVDTGPLPRQ CCHHHHHHHHHHCCCCCCCEEEECCCCCCCHHHHHHCCCCEEECCCCCEEEEECCCCCCC ADGLHIAAEGQARLGAAMAEAAQRLSR CCCEEEEECCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA