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The map label for this gene is (hspc4-1 [H]

Identifier: 197103926

GI number: 197103926

Start: 475706

End: 476158

Strand: Direct

Name: (hspc4-1 [H]

Synonym: PHZ_c0460

Alternate gene names: 197103926

Gene position: 475706-476158 (Clockwise)

Preceding gene: 197103924

Following gene: 197103927

Centisome position: 11.9

GC content: 67.55

Gene sequence:

>453_bases
ATGAACATCCCGACCCCCTCCAAGACGGCCGCGTCCGTGCGGTCGCCCTTCCAGCCCTTCCAGCGCGAGCTGAGCCGCTT
CTTCGACGAGCTCGAGTCCGGCTGGGAGGCGTTCACCGATTTCCGCCTCGCGCCCAGCATGGACGTCGCCGAGACCAAGG
AAGGCATGGAGATCAGCCTCGAGCTGCCCGGCCTGTCCCGCGAGGACGTGAAGATCTCGATGGACGGCGACCTGCTCACC
GTCAGCGGCGAGAAGAAGGCCGAGCGCGAGGAGAAGGACCGCCGCTACCGCCTGGTGGAGCGCAGCTACGGCGAATTCTC
CCGTTCGGTGCGCCTGCCGCGCAGCATCGATCCGGCCACCATCACCGCCGCCATGGCCGACGGCGTGCTAAGGATCACCG
GAACCAAGCGTCCCGACGCGGCGACCAAGACGATCGAGATCCAGGCCTCCTGA

Upstream 100 bases:

>100_bases
GCCGCGTTTTGATGAAGCTCAAGGCGCCGCCCGCCGGCGGCCGGCCTACTCGGCGAGCCGGTCCCTGGAGCAGGCCGGCC
CTGAGAGACAGGATCCGCCC

Downstream 100 bases:

>100_bases
GCAGGCGGCGTGGACGGAGCGCCTCGGCCCGCCGGTTCCGCCGGGGCGCTCCGAACACTTCAGGGAGCGACCCATGCCCG
ACGATCCGCGGCCTGCGGCC

Product: heat shock protein Hsp20

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 150; Mature: 150

Protein sequence:

>150_residues
MNIPTPSKTAASVRSPFQPFQRELSRFFDELESGWEAFTDFRLAPSMDVAETKEGMEISLELPGLSREDVKISMDGDLLT
VSGEKKAEREEKDRRYRLVERSYGEFSRSVRLPRSIDPATITAAMADGVLRITGTKRPDAATKTIEIQAS

Sequences:

>Translated_150_residues
MNIPTPSKTAASVRSPFQPFQRELSRFFDELESGWEAFTDFRLAPSMDVAETKEGMEISLELPGLSREDVKISMDGDLLT
VSGEKKAEREEKDRRYRLVERSYGEFSRSVRLPRSIDPATITAAMADGVLRITGTKRPDAATKTIEIQAS
>Mature_150_residues
MNIPTPSKTAASVRSPFQPFQRELSRFFDELESGWEAFTDFRLAPSMDVAETKEGMEISLELPGLSREDVKISMDGDLLT
VSGEKKAEREEKDRRYRLVERSYGEFSRSVRLPRSIDPATITAAMADGVLRITGTKRPDAATKTIEIQAS

Specific function: Unknown

COG id: COG0071

COG function: function code O; Molecular chaperone (small heat shock protein)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the small heat shock protein (HSP20) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002068
- InterPro:   IPR008978 [H]

Pfam domain/function: PF00011 HSP20 [H]

EC number: NA

Molecular weight: Translated: 16817; Mature: 16817

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: PS01031 HSP20

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIPTPSKTAASVRSPFQPFQRELSRFFDELESGWEAFTDFRLAPSMDVAETKEGMEISL
CCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCEEEE
ELPGLSREDVKISMDGDLLTVSGEKKAEREEKDRRYRLVERSYGEFSRSVRLPRSIDPAT
ECCCCCCCCEEEEECCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH
ITAAMADGVLRITGTKRPDAATKTIEIQAS
HHHHHHCCEEEEECCCCCCCCCEEEEEEEC
>Mature Secondary Structure
MNIPTPSKTAASVRSPFQPFQRELSRFFDELESGWEAFTDFRLAPSMDVAETKEGMEISL
CCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCEEEE
ELPGLSREDVKISMDGDLLTVSGEKKAEREEKDRRYRLVERSYGEFSRSVRLPRSIDPAT
ECCCCCCCCEEEEECCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH
ITAAMADGVLRITGTKRPDAATKTIEIQAS
HHHHHHCCEEEEECCCCCCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA