| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
Click here to switch to the map view.
The map label for this gene is 197103879
Identifier: 197103879
GI number: 197103879
Start: 419382
End: 420182
Strand: Direct
Name: 197103879
Synonym: PHZ_c0413
Alternate gene names: NA
Gene position: 419382-420182 (Clockwise)
Preceding gene: 197103878
Following gene: 197103884
Centisome position: 10.49
GC content: 78.15
Gene sequence:
>801_bases ATGCCGTCGGCCGCCACCGTGCTGGGCTGGCGCCGGCGCGATCCGCTGTTCGACCGCGAGATGGCCGATGCGATGGCCCT GGGGCGCACCCGCCGGGACGCCTTCGACCCGGCCGTGGCGAAGGCGCTGCTGGACCGGCTGAGCGCCGGCGAGGCGCTGG CGGCGGTGGTGCGCGACCCGGCCATGCCGAGCTGGCGGCGGCTGCGCCTGTGGCGGGCGACGGCGCCCGGCTTCGCCGAG GCGCTCGGGCTGCAGGCGGAGGGCAAGGCCGGGATCCGGATCCAGCGGCTGCGCGAGCGCCGCCGCGCCTTCGACCAGGC CGCCGCCGACCGGATCATCGTGGGCCTGAACCGCGGCGAGGGGCTGCGCGCCCTGCTGAACGGCGACCCGTCGCTGCCCA GCGCGGCGACGGTGGCGCGGTGGCGGCGGGAGAACCGCGAGTTCGACGCGCTGGTGCGCCTGATCCTCGCCGCCTGGGCC CGCAAGCGCGCGCGGGCGCGGCTGTTCTCGGAGGACCTGCAGGAGGCGGTGCTGGCGCGGATCGTCGAGGGCCACTCGTT CAACAGCCTCTCGCGCCTGCCCGGGATGCCGTGCCGCAAGACCCTGGGCAAATGGGTGCGCACCCGGCCCGACTTCGCCC GGGAGGTCGCCCAGGCGTGCGAGGACCGCGAGGACATCTTCGCCGACCAGGCGCTGGAGATCGCCCTGGCCGGCGGGCCC GACGCCGGGCGCCGGGTCGGCCGGCTGCGGCGCCAGGCGGTGCGGCTGCGCAACCGGCCGGGGCGGCGGCGGGGCGCCTA G
Upstream 100 bases:
>100_bases GGACGCCCGGTATCGCGCCCGCTGGCCCGAGCTGAAGGCCGAGATCGCCCGGCGGACGGCGCGGGGCGAGCGGCTGAAGG ACATCTGCGCGCCCGAGGGC
Downstream 100 bases:
>100_bases CGCGCAGGTCCGGGAGGGGGCGTGCGCAGCCGCACGGCTCCAGGGCGATGACGAAGGGGATGGGGGAGCGGGGCGCATGC ACCCCCAAGTCCGTCACGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 266; Mature: 265
Protein sequence:
>266_residues MPSAATVLGWRRRDPLFDREMADAMALGRTRRDAFDPAVAKALLDRLSAGEALAAVVRDPAMPSWRRLRLWRATAPGFAE ALGLQAEGKAGIRIQRLRERRRAFDQAAADRIIVGLNRGEGLRALLNGDPSLPSAATVARWRRENREFDALVRLILAAWA RKRARARLFSEDLQEAVLARIVEGHSFNSLSRLPGMPCRKTLGKWVRTRPDFAREVAQACEDREDIFADQALEIALAGGP DAGRRVGRLRRQAVRLRNRPGRRRGA
Sequences:
>Translated_266_residues MPSAATVLGWRRRDPLFDREMADAMALGRTRRDAFDPAVAKALLDRLSAGEALAAVVRDPAMPSWRRLRLWRATAPGFAE ALGLQAEGKAGIRIQRLRERRRAFDQAAADRIIVGLNRGEGLRALLNGDPSLPSAATVARWRRENREFDALVRLILAAWA RKRARARLFSEDLQEAVLARIVEGHSFNSLSRLPGMPCRKTLGKWVRTRPDFAREVAQACEDREDIFADQALEIALAGGP DAGRRVGRLRRQAVRLRNRPGRRRGA >Mature_265_residues PSAATVLGWRRRDPLFDREMADAMALGRTRRDAFDPAVAKALLDRLSAGEALAAVVRDPAMPSWRRLRLWRATAPGFAEA LGLQAEGKAGIRIQRLRERRRAFDQAAADRIIVGLNRGEGLRALLNGDPSLPSAATVARWRRENREFDALVRLILAAWAR KRARARLFSEDLQEAVLARIVEGHSFNSLSRLPGMPCRKTLGKWVRTRPDFAREVAQACEDREDIFADQALEIALAGGPD AGRRVGRLRRQAVRLRNRPGRRRGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29767; Mature: 29636
Theoretical pI: Translated: 12.11; Mature: 12.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSAATVLGWRRRDPLFDREMADAMALGRTRRDAFDPAVAKALLDRLSAGEALAAVVRDP CCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHCC AMPSWRRLRLWRATAPGFAEALGLQAEGKAGIRIQRLRERRRAFDQAAADRIIVGLNRGE CCCHHHHHHHHHCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEECCCCC GLRALLNGDPSLPSAATVARWRRENREFDALVRLILAAWARKRARARLFSEDLQEAVLAR CHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IVEGHSFNSLSRLPGMPCRKTLGKWVRTRPDFAREVAQACEDREDIFADQALEIALAGGP HHHCCCCCHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCC DAGRRVGRLRRQAVRLRNRPGRRRGA HHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure PSAATVLGWRRRDPLFDREMADAMALGRTRRDAFDPAVAKALLDRLSAGEALAAVVRDP CCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHCC AMPSWRRLRLWRATAPGFAEALGLQAEGKAGIRIQRLRERRRAFDQAAADRIIVGLNRGE CCCHHHHHHHHHCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEECCCCC GLRALLNGDPSLPSAATVARWRRENREFDALVRLILAAWARKRARARLFSEDLQEAVLAR CHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IVEGHSFNSLSRLPGMPCRKTLGKWVRTRPDFAREVAQACEDREDIFADQALEIALAGGP HHHCCCCCHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCC DAGRRVGRLRRQAVRLRNRPGRRRGA HHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA