Click here to switch to the map view.

The map label for this gene is 197103864

Identifier: 197103864

GI number: 197103864

Start: 400180

End: 401835

Strand: Reverse

Name: 197103864

Synonym: PHZ_c0398

Alternate gene names: NA

Gene position: 401835-400180 (Counterclockwise)

Preceding gene: 197103865

Following gene: 197103863

Centisome position: 10.06

GC content: 69.26

Gene sequence:

>1656_bases
ATGAAAAAACTCCTCCTGTGCGCCGCCGCCTCGATCGCCTTCGCGACGGCCGCCGCCGCGGCTCCGGCCGCCATCGACGC
CGCCCGCCTGACCCAGGACATCAAGGTGCTCTCCTCCGACGAGTTCGAGGGCCGCGCCCCGGCCTCGGCCGGCGAGGAGA
AGACCGTCGCCTACCTGATCGAGCAGATGAAGGCCGCGGGCCTTTCGCCCGCCGGCGACCTGAAGGCCGACGGGACCCGC
GCCTGGACCCAGGACGTGCCGCTCGCCCGCTTCGCCACCAAGGGCCCGGTGAAGGTCAGCGTCACCGCCGGCGGTGCGAC
CCAGCAGTGGACCCAGGGCGAGCAGGTCGCCATCCGCGCCGCCCAGACCGGCGCCGACCGGCTGGTCCTGAAGGACGTCC
CGGTGGTCTTCGCCGGCTACGGCGTGAAGGCCCCCGAGAAGAACTGGGACGACTTCAAGGGCTATGACCTGAAGGGCAAG
ATCGCCCTCGTCCTCGTCAACGATCCGGACTTCGAGGCCGGAGAGGGCGACTTCGGCGGCAAGGCCATGACCTACTACGG
CCGCTGGACCTACAAGTACGAGGAGGCCGCCCGCCAGGGCGCCGTCGGCTTCCTGGTGATCCACGAGACCGACCCGGCCT
CCTACGGCTGGGCGACCGTGAAGAACTCCAACACCAACGAGATCTTCGACGTCATCCGCAAGAACCCCGCCGAGGCCCAC
GCGCCCCTGGAGGGCTGGGTGCAGCGCGACGTGGCGGTGAGCCTGATGAAGACCGCCGGCCTCGACTTCGACGCGCTGAA
GAAGCAGGCCCAGACCCGCGACTTCCGGCCCGTGGAGCTGAAGGGCGTCACCTTCTCCACCGACTACGCCATCGACGCCC
AGAAGGTCGTCTCCAAGAACGTCGTGGGCGAGGTCCGCGGCGCCGAGCGCCCCGACGAGCGGGTGATCTACACCGCCCAC
TGGGATCACCTCGGCGTGGGCCTGCCCGACGCCCGCGGCGACAAGATCTACAACGGCGCGCTCGACAACGCCTCGGGCAC
GGCCGCGCTGCTGGAGCTCGGCCGCATCTACGCCAAGGGTCCGAAGCCCCAGCGCTCGGTCACCTTCCTGGCGGTGACGG
CCGAGGAGAAAGGCCTGCTGGGTTCGGAGTACTACGCCGACAACCCGCTCTATCCGCTGTCGAAGACCGTCGCGGTCATC
AACATGGACGGCGTCAACCTGCTGGGCCGGTTCAAGGACGTGACCATGTCCGGCGATGCGCCCATGACCCTGCAGGACGA
CATGATCCGGGTGGCCAAGGCGGGCGGCCTGACGTTCAGCCCCGATCCCAATCCGCAGGCGGGCAGCTTCTACCGCTCGG
ACCACTTCCCGTTCGCCAAGCGCGGGGTGCCGGCGATCTCGTTCGGCTCCGGCGAGACGCTGGAGAAGGGCGGCAAGGCC
GCCGGCCGCGCGGCCTCCGAGGCCTACACCAAGGACAAGTACCACCAGCCGGCCGACGAGTTCGATCCCAACTGGGACAT
GTCGGGCGCCGTCCAGGAGATCGGCCTCTACTACCAGCTCGGCCACGAGCTCGCGAACAGCCGCACCTGGCCCGAGTGGA
AGGAAGGCGCCGAGTTCAAGGCAGCCCGCGACGAGACCAAGGCGGAGCGGCAGTAA

Upstream 100 bases:

>100_bases
CGGAATCGAGGCGTTCATCGCCAGGCGGCGGTCCGAGGCCTAGCGGAGGCGGACGCCGGCCATTAGGGTCGCGCCACTCT
TAGCCAGTCCGAGTGCCTGA

Downstream 100 bases:

>100_bases
GGTCCTCCGGAGGGCGGCGCCGCAACGCGCCGCCCTTTCTCTATCCCGGCCTGCCGCCGCCCAGCCCAGCCCAGCCCAGC
CCAGCTGGAACATCTTGAGA

Product: peptidase, M20/M25/M40 family

Products: NA

Alternate protein names: Aminopeptidase; Peptidase; M28 Family Peptidase; Peptidase Family M; Glutamate Carboxypeptidase II; M20/M25/M40 Family Peptidase; Aminopeptidase Family; M28 Family Aminopeptidase; Peptidase Family Protein; M23B Family Peptidase; Protein Containing Aminopeptidase Domain; Component Of l Biopolymer Transport System; WD40-Like Beta Propeller; PDZ Domain-Containing Protein

Number of amino acids: Translated: 551; Mature: 551

Protein sequence:

>551_residues
MKKLLLCAAASIAFATAAAAAPAAIDAARLTQDIKVLSSDEFEGRAPASAGEEKTVAYLIEQMKAAGLSPAGDLKADGTR
AWTQDVPLARFATKGPVKVSVTAGGATQQWTQGEQVAIRAAQTGADRLVLKDVPVVFAGYGVKAPEKNWDDFKGYDLKGK
IALVLVNDPDFEAGEGDFGGKAMTYYGRWTYKYEEAARQGAVGFLVIHETDPASYGWATVKNSNTNEIFDVIRKNPAEAH
APLEGWVQRDVAVSLMKTAGLDFDALKKQAQTRDFRPVELKGVTFSTDYAIDAQKVVSKNVVGEVRGAERPDERVIYTAH
WDHLGVGLPDARGDKIYNGALDNASGTAALLELGRIYAKGPKPQRSVTFLAVTAEEKGLLGSEYYADNPLYPLSKTVAVI
NMDGVNLLGRFKDVTMSGDAPMTLQDDMIRVAKAGGLTFSPDPNPQAGSFYRSDHFPFAKRGVPAISFGSGETLEKGGKA
AGRAASEAYTKDKYHQPADEFDPNWDMSGAVQEIGLYYQLGHELANSRTWPEWKEGAEFKAARDETKAERQ

Sequences:

>Translated_551_residues
MKKLLLCAAASIAFATAAAAAPAAIDAARLTQDIKVLSSDEFEGRAPASAGEEKTVAYLIEQMKAAGLSPAGDLKADGTR
AWTQDVPLARFATKGPVKVSVTAGGATQQWTQGEQVAIRAAQTGADRLVLKDVPVVFAGYGVKAPEKNWDDFKGYDLKGK
IALVLVNDPDFEAGEGDFGGKAMTYYGRWTYKYEEAARQGAVGFLVIHETDPASYGWATVKNSNTNEIFDVIRKNPAEAH
APLEGWVQRDVAVSLMKTAGLDFDALKKQAQTRDFRPVELKGVTFSTDYAIDAQKVVSKNVVGEVRGAERPDERVIYTAH
WDHLGVGLPDARGDKIYNGALDNASGTAALLELGRIYAKGPKPQRSVTFLAVTAEEKGLLGSEYYADNPLYPLSKTVAVI
NMDGVNLLGRFKDVTMSGDAPMTLQDDMIRVAKAGGLTFSPDPNPQAGSFYRSDHFPFAKRGVPAISFGSGETLEKGGKA
AGRAASEAYTKDKYHQPADEFDPNWDMSGAVQEIGLYYQLGHELANSRTWPEWKEGAEFKAARDETKAERQ
>Mature_551_residues
MKKLLLCAAASIAFATAAAAAPAAIDAARLTQDIKVLSSDEFEGRAPASAGEEKTVAYLIEQMKAAGLSPAGDLKADGTR
AWTQDVPLARFATKGPVKVSVTAGGATQQWTQGEQVAIRAAQTGADRLVLKDVPVVFAGYGVKAPEKNWDDFKGYDLKGK
IALVLVNDPDFEAGEGDFGGKAMTYYGRWTYKYEEAARQGAVGFLVIHETDPASYGWATVKNSNTNEIFDVIRKNPAEAH
APLEGWVQRDVAVSLMKTAGLDFDALKKQAQTRDFRPVELKGVTFSTDYAIDAQKVVSKNVVGEVRGAERPDERVIYTAH
WDHLGVGLPDARGDKIYNGALDNASGTAALLELGRIYAKGPKPQRSVTFLAVTAEEKGLLGSEYYADNPLYPLSKTVAVI
NMDGVNLLGRFKDVTMSGDAPMTLQDDMIRVAKAGGLTFSPDPNPQAGSFYRSDHFPFAKRGVPAISFGSGETLEKGGKA
AGRAASEAYTKDKYHQPADEFDPNWDMSGAVQEIGLYYQLGHELANSRTWPEWKEGAEFKAARDETKAERQ

Specific function: Unknown

COG id: COG2234

COG function: function code R; Predicted aminopeptidases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI4885505, Length=263, Percent_Identity=30.4182509505703, Blast_Score=67, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 59508; Mature: 59508

Theoretical pI: Translated: 5.45; Mature: 5.45

Prosite motif: PS00697 DNA_LIGASE_A1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLLLCAAASIAFATAAAAAPAAIDAARLTQDIKVLSSDEFEGRAPASAGEEKTVAYLI
CCCEEEHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHH
EQMKAAGLSPAGDLKADGTRAWTQDVPLARFATKGPVKVSVTAGGATQQWTQGEQVAIRA
HHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCEEEEEECCCCCCCCCCCCEEEEEE
AQTGADRLVLKDVPVVFAGYGVKAPEKNWDDFKGYDLKGKIALVLVNDPDFEAGEGDFGG
ECCCCCEEEEECCCEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCC
KAMTYYGRWTYKYEEAARQGAVGFLVIHETDPASYGWATVKNSNTNEIFDVIRKNPAEAH
CEEEEEEEEEEEHHHHHHCCCEEEEEEECCCCCCCCEEEEECCCHHHHHHHHHCCCCCCC
APLEGWVQRDVAVSLMKTAGLDFDALKKQAQTRDFRPVELKGVTFSTDYAIDAQKVVSKN
CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCEEEEEEEEECCCCCCHHHHHHHH
VVGEVRGAERPDERVIYTAHWDHLGVGLPDARGDKIYNGALDNASGTAALLELGRIYAKG
HHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHCC
PKPQRSVTFLAVTAEEKGLLGSEYYADNPLYPLSKTVAVINMDGVNLLGRFKDVTMSGDA
CCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHCEEEEECCCC
PMTLQDDMIRVAKAGGLTFSPDPNPQAGSFYRSDHFPFAKRGVPAISFGSGETLEKGGKA
CCEEHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCCHHHCCCCEEECCCCCHHHHCCCC
AGRAASEAYTKDKYHQPADEFDPNWDMSGAVQEIGLYYQLGHELANSRTWPEWKEGAEFK
CCCHHHHHHHHHHCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCC
AARDETKAERQ
HHHHHHHHCCC
>Mature Secondary Structure
MKKLLLCAAASIAFATAAAAAPAAIDAARLTQDIKVLSSDEFEGRAPASAGEEKTVAYLI
CCCEEEHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHH
EQMKAAGLSPAGDLKADGTRAWTQDVPLARFATKGPVKVSVTAGGATQQWTQGEQVAIRA
HHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCEEEEEECCCCCCCCCCCCEEEEEE
AQTGADRLVLKDVPVVFAGYGVKAPEKNWDDFKGYDLKGKIALVLVNDPDFEAGEGDFGG
ECCCCCEEEEECCCEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCC
KAMTYYGRWTYKYEEAARQGAVGFLVIHETDPASYGWATVKNSNTNEIFDVIRKNPAEAH
CEEEEEEEEEEEHHHHHHCCCEEEEEEECCCCCCCCEEEEECCCHHHHHHHHHCCCCCCC
APLEGWVQRDVAVSLMKTAGLDFDALKKQAQTRDFRPVELKGVTFSTDYAIDAQKVVSKN
CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCEEEEEEEEECCCCCCHHHHHHHH
VVGEVRGAERPDERVIYTAHWDHLGVGLPDARGDKIYNGALDNASGTAALLELGRIYAKG
HHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHCC
PKPQRSVTFLAVTAEEKGLLGSEYYADNPLYPLSKTVAVINMDGVNLLGRFKDVTMSGDA
CCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHCEEEEECCCC
PMTLQDDMIRVAKAGGLTFSPDPNPQAGSFYRSDHFPFAKRGVPAISFGSGETLEKGGKA
CCEEHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCCHHHCCCCEEECCCCCHHHHCCCC
AGRAASEAYTKDKYHQPADEFDPNWDMSGAVQEIGLYYQLGHELANSRTWPEWKEGAEFK
CCCHHHHHHHHHHCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCC
AARDETKAERQ
HHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA