| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197103863
Identifier: 197103863
GI number: 197103863
Start: 399204
End: 400028
Strand: Reverse
Name: 197103863
Synonym: PHZ_c0397
Alternate gene names: NA
Gene position: 400028-399204 (Counterclockwise)
Preceding gene: 197103864
Following gene: 197103862
Centisome position: 10.01
GC content: 68.48
Gene sequence:
>825_bases ATGGCGGCGGCAGGCAGGATCCGGTGCGGGATCGGCGGCTGGACGTTCGAGCCCTGGCGCGGGGTGTTCTATCCGGCGGG CCTGCGGCAGGCCGACGAGCTGGCCTACGCCAGCCGCCGCCTGACCGTCATCGAGATCAACGGCACCTACTATTCCAGCT TCAAGCCCGACAGCTGGGAGAAGTGGCGCGCGGCCACGCCCGAGGGCTTCCAGTTCTCGGTGAAAGCCTCGCGCTTCTGC ACCAACCGCAAGGTCCTCGCCGACGGCAAGGGCTCGATGGAGATCTTCCTGAACCAGGGCCTGGCCCTGCTGGGCGACCG GCTCGGGCCGATCCTGTGGCAGTTCGCCCCCACCAAGAAGTTCGACTACGACGACTTCGCCGGCTGGCTCGAGCTGCTGC CGAAGAGCCTGGACAACCTCAGGCTCCGCCACGTGGTCGAGGTCCGCAACGCAAGCTTCGCCGACCCGAAGTTCGTCGCC CTCTGCCGCGACCACAACGTGGCGATCTGCAACTCCGAGAACGAGAACTATCCCTTCATCCCTGACGTGACCGCCGACTT CGTCTACCTGCGGCTGCTGTCGGCCTCGGACGACATCCCCACCGGCTATTCGCCCGCCGATCTCGACCTGTGGGCCGGCC GGTTCCGGGCCTACGCCGAGGGCCGCATCCCGGACGACATGCGCCCGATCGACCGCACCGGCCCGCCCGAGGAGCCGCGC GACGTCTACGCCTTCGTCATCCACGAGGGGAAGGTCCGCGCCCCGGCCGCGGCCATGGAGTTCATCCGCCGGGTCGATCC GGAGTTCCGGCCGCAGGACCTGTAA
Upstream 100 bases:
>100_bases TGCCGCCGCCCAGCCCAGCCCAGCCCAGCCCAGCTGGAACATCTTGAGAACTTCGCGGATCGACGTTAGCTAAAGGCGCG ATCAAGGCGGGAGGCCCACC
Downstream 100 bases:
>100_bases CCACCGTCACGCCACGGAACGCTTGCAGGCCCCCGCGTTACCCGCGAGAATGACGCGCGTCATTTTCGTAGAACGAGTCT GCACACCCTCCATGGCCCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 274; Mature: 273
Protein sequence:
>274_residues MAAAGRIRCGIGGWTFEPWRGVFYPAGLRQADELAYASRRLTVIEINGTYYSSFKPDSWEKWRAATPEGFQFSVKASRFC TNRKVLADGKGSMEIFLNQGLALLGDRLGPILWQFAPTKKFDYDDFAGWLELLPKSLDNLRLRHVVEVRNASFADPKFVA LCRDHNVAICNSENENYPFIPDVTADFVYLRLLSASDDIPTGYSPADLDLWAGRFRAYAEGRIPDDMRPIDRTGPPEEPR DVYAFVIHEGKVRAPAAAMEFIRRVDPEFRPQDL
Sequences:
>Translated_274_residues MAAAGRIRCGIGGWTFEPWRGVFYPAGLRQADELAYASRRLTVIEINGTYYSSFKPDSWEKWRAATPEGFQFSVKASRFC TNRKVLADGKGSMEIFLNQGLALLGDRLGPILWQFAPTKKFDYDDFAGWLELLPKSLDNLRLRHVVEVRNASFADPKFVA LCRDHNVAICNSENENYPFIPDVTADFVYLRLLSASDDIPTGYSPADLDLWAGRFRAYAEGRIPDDMRPIDRTGPPEEPR DVYAFVIHEGKVRAPAAAMEFIRRVDPEFRPQDL >Mature_273_residues AAAGRIRCGIGGWTFEPWRGVFYPAGLRQADELAYASRRLTVIEINGTYYSSFKPDSWEKWRAATPEGFQFSVKASRFCT NRKVLADGKGSMEIFLNQGLALLGDRLGPILWQFAPTKKFDYDDFAGWLELLPKSLDNLRLRHVVEVRNASFADPKFVAL CRDHNVAICNSENENYPFIPDVTADFVYLRLLSASDDIPTGYSPADLDLWAGRFRAYAEGRIPDDMRPIDRTGPPEEPRD VYAFVIHEGKVRAPAAAMEFIRRVDPEFRPQDL
Specific function: Unknown
COG id: COG1801
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31094; Mature: 30962
Theoretical pI: Translated: 5.84; Mature: 5.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAAGRIRCGIGGWTFEPWRGVFYPAGLRQADELAYASRRLTVIEINGTYYSSFKPDSWE CCCCCEEEECCCCCCCCCCCCEECCCCCCHHHHHHHHHCCEEEEEECCEEEECCCCCCCH KWRAATPEGFQFSVKASRFCTNRKVLADGKGSMEIFLNQGLALLGDRLGPILWQFAPTKK HHCCCCCCCEEEEEEHHHHHCCCEEEECCCCCEEEEECCCHHHHHHHHHHHHEECCCCCC FDYDDFAGWLELLPKSLDNLRLRHVVEVRNASFADPKFVALCRDHNVAICNSENENYPFI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCEEEECCCCCCCCCC PDVTADFVYLRLLSASDDIPTGYSPADLDLWAGRFRAYAEGRIPDDMRPIDRTGPPEEPR CCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCC DVYAFVIHEGKVRAPAAAMEFIRRVDPEFRPQDL CEEEEEEECCCCCCCHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure AAAGRIRCGIGGWTFEPWRGVFYPAGLRQADELAYASRRLTVIEINGTYYSSFKPDSWE CCCCEEEECCCCCCCCCCCCEECCCCCCHHHHHHHHHCCEEEEEECCEEEECCCCCCCH KWRAATPEGFQFSVKASRFCTNRKVLADGKGSMEIFLNQGLALLGDRLGPILWQFAPTKK HHCCCCCCCEEEEEEHHHHHCCCEEEECCCCCEEEEECCCHHHHHHHHHHHHEECCCCCC FDYDDFAGWLELLPKSLDNLRLRHVVEVRNASFADPKFVALCRDHNVAICNSENENYPFI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCEEEECCCCCCCCCC PDVTADFVYLRLLSASDDIPTGYSPADLDLWAGRFRAYAEGRIPDDMRPIDRTGPPEEPR CCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCC DVYAFVIHEGKVRAPAAAMEFIRRVDPEFRPQDL CEEEEEEECCCCCCCHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA