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The map label for this gene is recR

Identifier: 197103837

GI number: 197103837

Start: 375463

End: 376065

Strand: Direct

Name: recR

Synonym: PHZ_c0371

Alternate gene names: 197103837

Gene position: 375463-376065 (Clockwise)

Preceding gene: 197103836

Following gene: 197103838

Centisome position: 9.4

GC content: 77.11

Gene sequence:

>603_bases
ATGGCCGCCTCCGCCGGACCCGAGATCGAGCGGCTGATCGGGCTGCTCGCCAAGCTGCCGGGGCTGGGACCGCGGTCGGC
GCGGCGCGCGGCGCTGGCCCTGCTGAAGCGGCGCGACCAGCTCCTGGCGCCGCTGTCCGACGCCCTGGCCGAGGCGGCGG
CGCGGGTGAAGACCTGTTCGACGTGCGGCAGCCTCGACACCCAGGACCCCTGCGCGATCTGTTCCGACGGGACGCGGGAC
GCCAGCCTGATCTGCGTGGTCGAGGAGGTCGGCGCGCTGTGGGCCATGGAGCGGGCGGGCGCGTTCCGCGGCCGCTACCA
CGTGCTGGGCGGGCTGCTGTCGGCGCTGGACGGCGTGGGGCCGGACGCCCTGCGGGTCGGGCCCCTGGTGGCGCGGGCCA
GCGAGCCCGGCGTGCGCGAGGTGATCCTGGCCCTGCCGGCGACCGTCGATGGCCAGACGACGGCGCACTACCTGGCCGAG
CGGCTGGCCGGCGCGGAGGTGACGGTCAGCATGCTGGCCCGCGGCGTGCCGGTGGGCGGCGAGCTGGACTGGCTGGACGA
CGGCACCATCGCCCAGGCCATGCGGGCGCGCCGGCCGGCATAG

Upstream 100 bases:

>100_bases
GGCTGGACCGGCATGGCAGGGGCGAGGGCGCGGGCGGCAGCCGGCGAGCTGCCGACCGCCAACGCCGTCGTCGATTTCGC
GCCGTGAGGGGGGACTGACC

Downstream 100 bases:

>100_bases
ACATCCGACGTCATCCCTCTGATCGCTGCGCGACCGTGGGATGACGGGGATGGGGGACTCGCGCTAAGAACGCAGCATGA
ACGCCATGCTGATCCTCGCC

Product: recombination protein RecR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 200; Mature: 199

Protein sequence:

>200_residues
MAASAGPEIERLIGLLAKLPGLGPRSARRAALALLKRRDQLLAPLSDALAEAAARVKTCSTCGSLDTQDPCAICSDGTRD
ASLICVVEEVGALWAMERAGAFRGRYHVLGGLLSALDGVGPDALRVGPLVARASEPGVREVILALPATVDGQTTAHYLAE
RLAGAEVTVSMLARGVPVGGELDWLDDGTIAQAMRARRPA

Sequences:

>Translated_200_residues
MAASAGPEIERLIGLLAKLPGLGPRSARRAALALLKRRDQLLAPLSDALAEAAARVKTCSTCGSLDTQDPCAICSDGTRD
ASLICVVEEVGALWAMERAGAFRGRYHVLGGLLSALDGVGPDALRVGPLVARASEPGVREVILALPATVDGQTTAHYLAE
RLAGAEVTVSMLARGVPVGGELDWLDDGTIAQAMRARRPA
>Mature_199_residues
AASAGPEIERLIGLLAKLPGLGPRSARRAALALLKRRDQLLAPLSDALAEAAARVKTCSTCGSLDTQDPCAICSDGTRDA
SLICVVEEVGALWAMERAGAFRGRYHVLGGLLSALDGVGPDALRVGPLVARASEPGVREVILALPATVDGQTTAHYLAER
LAGAEVTVSMLARGVPVGGELDWLDDGTIAQAMRARRPA

Specific function: May play a role in DNA repair. It seems to be involved in an recBC-independent recombinational process of DNA repair. It may act with recF and recO

COG id: COG0353

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recR family

Homologues:

Organism=Escherichia coli, GI1786678, Length=196, Percent_Identity=41.3265306122449, Blast_Score=146, Evalue=8e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RECR_PHEZH (B4RDT6)

Other databases:

- EMBL:   CP000747
- RefSeq:   YP_002129214.1
- GeneID:   6789861
- GenomeReviews:   CP000747_GR
- KEGG:   pzu:PHZ_c0371
- HOGENOM:   HBG571744
- OMA:   HGAISPM
- ProtClustDB:   PRK00076
- HAMAP:   MF_00017
- InterPro:   IPR003583
- InterPro:   IPR000093
- InterPro:   IPR006171
- InterPro:   IPR015967
- SMART:   SM00278
- SMART:   SM00493
- TIGRFAMs:   TIGR00615

Pfam domain/function: PF02132 RecR; SSF111304 RecR

EC number: NA

Molecular weight: Translated: 20714; Mature: 20583

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: PS01300 RECR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAASAGPEIERLIGLLAKLPGLGPRSARRAALALLKRRDQLLAPLSDALAEAAARVKTCS
CCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TCGSLDTQDPCAICSDGTRDASLICVVEEVGALWAMERAGAFRGRYHVLGGLLSALDGVG
HHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCC
PDALRVGPLVARASEPGVREVILALPATVDGQTTAHYLAERLAGAEVTVSMLARGVPVGG
CCHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCC
ELDWLDDGTIAQAMRARRPA
CCCCCCCCHHHHHHHHCCCC
>Mature Secondary Structure 
AASAGPEIERLIGLLAKLPGLGPRSARRAALALLKRRDQLLAPLSDALAEAAARVKTCS
CCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TCGSLDTQDPCAICSDGTRDASLICVVEEVGALWAMERAGAFRGRYHVLGGLLSALDGVG
HHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCC
PDALRVGPLVARASEPGVREVILALPATVDGQTTAHYLAERLAGAEVTVSMLARGVPVGG
CCHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCC
ELDWLDDGTIAQAMRARRPA
CCCCCCCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA