Click here to switch to the map view.

The map label for this gene is yebA [C]

Identifier: 197103836

GI number: 197103836

Start: 374307

End: 375449

Strand: Direct

Name: yebA [C]

Synonym: PHZ_c0370

Alternate gene names: 197103836

Gene position: 374307-375449 (Clockwise)

Preceding gene: 197103835

Following gene: 197103837

Centisome position: 9.37

GC content: 76.2

Gene sequence:

>1143_bases
ATGCGGACGATGCTGGGGGCGCTGGCGGCGACGCTGCTGGCCGGTGCGGCGGCGGCCGAGCCGTCGGTGGTCCCGCTGGA
CGTGCTGGCGCCACCGCGGGCGAGCGCCGTGCCCGGCGGTGAGCGGCTGCACCTGCTCTATGAGCTGCGGCTGACGAACT
TCGCGCCCCGGCCGGTGACGCTGGAGTCCCTCGAGGTCCTGGACCCGGCGGGCGCCGCGCTGGCGGCGTTCGATGCGGCG
GCGCTGAAGGACATGGTGGCGCACCGCGGCGCCTCGCCCGCCGAGGGCGGCGAACTGACTGTGCCGGCGGGCGGGTTCGT
CACCGTGTTCGTGGGCGTCGAGACGACCCCCGGCCAAGCGCCGGCCAGGCTGTCCCACCGCATCAGGGTGCGCGCCGCCG
CCCCTGACGCGCCGGCCAGCCGCACGATCCTGCGGGGCGGCGAGCTGGCGGTCGGCGGAGCCCCGCTGAGGCTCGGCCCG
CCCCTGAGGGGCGGCGGCTGGCTGGCGGCCAATGCGCTCTCGAACGAGGCCGATCACCGGCGCACGATCGCGGTGGTGGA
CGGCAAGGCGCGCATCTCCCAGCGCTACGCCATCGACTTCGTGCGGCTGGACGCGCGGGGGCGCGCGTTCGTCGGCGACC
CGGCCCGCAACGAGTCCTGGCCCGGCTACGGCGCCGAGGTGCTGGCCGTGGCCGACGGGACCGTGGCGGCGGTGAAGGAC
GATCTGCCCGACAACGCCCCCGGCGGGGCGCCGGCCGTGCCGATCAGCCTCACAACGATCGGCGGCAACCACGTGGTGCT
GGACCTGGGCGGCGGCGCCTACGCCTTCTATGGCCACCTGCAACCCGGCGGCGTGCGCGTGAAGCCCGGCCAGAAGGTCC
GGCGCGGCGAGGTGCTGGGCCGGCTCGGCAACTCCGGCCAATCCGACGCGCCGCACCTGCATCTCCACGTCTCGGACGGG
ACCAGCGCCCTGGGGGGCGAGGGCCTGCCATACGTCTTCGACGGGCTGGTGGTGCGCGGCCAGGTCCCCTCGCTGGAGGT
GCTGGAGCGGCCCGAGGGCTGGACCGGCATGGCAGGGGCGAGGGCGCGGGCGGCAGCCGGCGAGCTGCCGACCGCCAACG
CCGTCGTCGATTTCGCGCCGTGA

Upstream 100 bases:

>100_bases
ACGCCGACGCCAAGCGCAAGCTGGACGAGAAGCAGGCCGAGGTGATGCGCGAGGCCGCGGGTCCCTTCGCCGGCATGCCC
GGAATGCCGAAGCTGTTCTG

Downstream 100 bases:

>100_bases
GGGGGGACTGACCATGGCCGCCTCCGCCGGACCCGAGATCGAGCGGCTGATCGGGCTGCTCGCCAAGCTGCCGGGGCTGG
GACCGCGGTCGGCGCGGCGC

Product: peptidase

Products: NA

Alternate protein names: Peptidase; Secreted Peptidase; M23 Peptidase Domain-Containing Protein; Metalloendopeptidase-Like Membrane Protein; M23 Peptidase Domain Protein; Urea Transporter; M23/M37 Peptidase Domain-Containing Protein; Peptidase Family; Peptidase Family M; Cell Wall Endopeptidase Family; M24/M37 Family Peptidase

Number of amino acids: Translated: 380; Mature: 380

Protein sequence:

>380_residues
MRTMLGALAATLLAGAAAAEPSVVPLDVLAPPRASAVPGGERLHLLYELRLTNFAPRPVTLESLEVLDPAGAALAAFDAA
ALKDMVAHRGASPAEGGELTVPAGGFVTVFVGVETTPGQAPARLSHRIRVRAAAPDAPASRTILRGGELAVGGAPLRLGP
PLRGGGWLAANALSNEADHRRTIAVVDGKARISQRYAIDFVRLDARGRAFVGDPARNESWPGYGAEVLAVADGTVAAVKD
DLPDNAPGGAPAVPISLTTIGGNHVVLDLGGGAYAFYGHLQPGGVRVKPGQKVRRGEVLGRLGNSGQSDAPHLHLHVSDG
TSALGGEGLPYVFDGLVVRGQVPSLEVLERPEGWTGMAGARARAAAGELPTANAVVDFAP

Sequences:

>Translated_380_residues
MRTMLGALAATLLAGAAAAEPSVVPLDVLAPPRASAVPGGERLHLLYELRLTNFAPRPVTLESLEVLDPAGAALAAFDAA
ALKDMVAHRGASPAEGGELTVPAGGFVTVFVGVETTPGQAPARLSHRIRVRAAAPDAPASRTILRGGELAVGGAPLRLGP
PLRGGGWLAANALSNEADHRRTIAVVDGKARISQRYAIDFVRLDARGRAFVGDPARNESWPGYGAEVLAVADGTVAAVKD
DLPDNAPGGAPAVPISLTTIGGNHVVLDLGGGAYAFYGHLQPGGVRVKPGQKVRRGEVLGRLGNSGQSDAPHLHLHVSDG
TSALGGEGLPYVFDGLVVRGQVPSLEVLERPEGWTGMAGARARAAAGELPTANAVVDFAP
>Mature_380_residues
MRTMLGALAATLLAGAAAAEPSVVPLDVLAPPRASAVPGGERLHLLYELRLTNFAPRPVTLESLEVLDPAGAALAAFDAA
ALKDMVAHRGASPAEGGELTVPAGGFVTVFVGVETTPGQAPARLSHRIRVRAAAPDAPASRTILRGGELAVGGAPLRLGP
PLRGGGWLAANALSNEADHRRTIAVVDGKARISQRYAIDFVRLDARGRAFVGDPARNESWPGYGAEVLAVADGTVAAVKD
DLPDNAPGGAPAVPISLTTIGGNHVVLDLGGGAYAFYGHLQPGGVRVKPGQKVRRGEVLGRLGNSGQSDAPHLHLHVSDG
TSALGGEGLPYVFDGLVVRGQVPSLEVLERPEGWTGMAGARARAAAGELPTANAVVDFAP

Specific function: Could Be Involved In Cell Wall Degradation Or Formation. [C]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.4.24.- [C]

Molecular weight: Translated: 38764; Mature: 38764

Theoretical pI: Translated: 7.04; Mature: 7.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTMLGALAATLLAGAAAAEPSVVPLDVLAPPRASAVPGGERLHLLYELRLTNFAPRPVT
CCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCEEEEEEEEEECCCCCCCEE
LESLEVLDPAGAALAAFDAAALKDMVAHRGASPAEGGELTVPAGGFVTVFVGVETTPGQA
HHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCEEEEEEEEECCCCCC
PARLSHRIRVRAAAPDAPASRTILRGGELAVGGAPLRLGPPLRGGGWLAANALSNEADHR
CHHCCEEEEEEEECCCCCCCCEEEECCCEEECCCCEEECCCCCCCCEEEECCCCCCCCCC
RTIAVVDGKARISQRYAIDFVRLDARGRAFVGDPARNESWPGYGAEVLAVADGTVAAVKD
EEEEEECCHHHHCCEEEEEEEEECCCCCEEECCCCCCCCCCCCCCEEEEEECCCEEEEEC
DLPDNAPGGAPAVPISLTTIGGNHVVLDLGGGAYAFYGHLQPGGVRVKPGQKVRRGEVLG
CCCCCCCCCCCEEEEEEEEECCCEEEEECCCCEEEEEEECCCCCEEECCCCCHHHHHHHH
RLGNSGQSDAPHLHLHVSDGTSALGGEGLPYVFDGLVVRGQVPSLEVLERPEGWTGMAGA
HCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHCCCEEEECCCCCHHHHCCCCCCCCCCCC
RARAAAGELPTANAVVDFAP
CHHHHCCCCCCCCEEEEECC
>Mature Secondary Structure
MRTMLGALAATLLAGAAAAEPSVVPLDVLAPPRASAVPGGERLHLLYELRLTNFAPRPVT
CCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCEEEEEEEEEECCCCCCCEE
LESLEVLDPAGAALAAFDAAALKDMVAHRGASPAEGGELTVPAGGFVTVFVGVETTPGQA
HHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCEEEEEEEEECCCCCC
PARLSHRIRVRAAAPDAPASRTILRGGELAVGGAPLRLGPPLRGGGWLAANALSNEADHR
CHHCCEEEEEEEECCCCCCCCEEEECCCEEECCCCEEECCCCCCCCEEEECCCCCCCCCC
RTIAVVDGKARISQRYAIDFVRLDARGRAFVGDPARNESWPGYGAEVLAVADGTVAAVKD
EEEEEECCHHHHCCEEEEEEEEECCCCCEEECCCCCCCCCCCCCCEEEEEECCCEEEEEC
DLPDNAPGGAPAVPISLTTIGGNHVVLDLGGGAYAFYGHLQPGGVRVKPGQKVRRGEVLG
CCCCCCCCCCCEEEEEEEEECCCEEEEECCCCEEEEEEECCCCCEEECCCCCHHHHHHHH
RLGNSGQSDAPHLHLHVSDGTSALGGEGLPYVFDGLVVRGQVPSLEVLERPEGWTGMAGA
HCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHCCCEEEECCCCCHHHHCCCCCCCCCCCC
RARAAAGELPTANAVVDFAP
CHHHHCCCCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA