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The map label for this gene is nudC [H]

Identifier: 197103829

GI number: 197103829

Start: 367640

End: 368566

Strand: Reverse

Name: nudC [H]

Synonym: PHZ_c0363

Alternate gene names: 197103829

Gene position: 368566-367640 (Counterclockwise)

Preceding gene: 197103830

Following gene: 197103826

Centisome position: 9.22

GC content: 72.49

Gene sequence:

>927_bases
ATGCCGCTCTCCGCCTTCACCAACACCTTCGCCGGCAACCCGCTCGACCGGGCCAGTGACCGCCGGTCCGACGAGGCCTG
GCTCTCGAGCCAGCTCGCCTCGGCCGAGTCCCTCGCCCTGGCCGTCTGGAACGGCCGCCCGCTGGTCGAGAAGACCTCCG
GCGGCGGGGTCCAGATCGCCTATCTGCCGGCGCGCCTGGCGGGCGAGCTCTCGGGCGGGCCCGAGCGGCTGCTGTTCCTG
GGCCTGTGGAAGGAGACCGCCGTCTTCGCCGTGGACCTGGAGGGCTTCTCCGATCCCACCGAGGGCCCGCTGCAGGGCCT
TGGCGAATTCGCCGACCTGCGCCAGGTCGCCCTCGCCCTGCCCGGTCCCGAGGCCGCCATCTGCGCCACCGCCAAGTCGA
TGTTCGAGTGGCGGCGCAAGCACCGCCGCTGCGCCAACTGCGGCGAGCCGACCGACGTGAAGGACGCGGGCTGGAAGCGC
CAGTGCCCGGCCTGCGAGACGGAGCACTTCCCCCGCACCGACCCCGTGGTCATCATGCTGCCCTATCACGGCGGCCGCTG
CATGCTTGGCCGCCAGGAGGCCTGGCCCAAGGGCATGTTCTCGGCCCTCGCCGGCTTCCTCGAGCCCGGCGAGAGCATCG
AGGAGGCCTGCGCCCGCGAGCTGTCGGAAGAGGCCGGCCTGCGCACCCTGACGGTCCGCTACCACTCGACCCAGCCGTGG
CCCTATCCCTCCTCGCTGATGATCGGCCTGCTGGCCGAGGTGGAGGACGACGAGGGGACCCCCGACCAGACCGAGCTGTC
CGAGGTGCGCTGGTTCACCCGCGAGGAGGCGAAGGCCCTGCTCGCCGGGCAGGTCGAGGGCCTCTTCTGCCCGCCCCCGC
TCGCCATCGCCCACCAGCTCCTCAAGGCCTGGGTCGAGGAAGGCTGA

Upstream 100 bases:

>100_bases
TGCAGGGAGTGCAGCTTTCCGCCCTTGGGGACGGCTGGATCACGGTCGGCTGATCGGTTCAGCCTTGGGTCGGAGGCGGT
GACGGCGATATGTAGTCGCC

Downstream 100 bases:

>100_bases
CCCCTCCTCTCCCCCCGCGAAGCGGGGCGAGGGAGCGGCCGCGCGGCGCTACCCCCGGCTCGTGCGGAACGGGTCGGCCG
GATAGACGCCGAGGATCTCG

Product: MutT/nudix family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 308; Mature: 307

Protein sequence:

>308_residues
MPLSAFTNTFAGNPLDRASDRRSDEAWLSSQLASAESLALAVWNGRPLVEKTSGGGVQIAYLPARLAGELSGGPERLLFL
GLWKETAVFAVDLEGFSDPTEGPLQGLGEFADLRQVALALPGPEAAICATAKSMFEWRRKHRRCANCGEPTDVKDAGWKR
QCPACETEHFPRTDPVVIMLPYHGGRCMLGRQEAWPKGMFSALAGFLEPGESIEEACARELSEEAGLRTLTVRYHSTQPW
PYPSSLMIGLLAEVEDDEGTPDQTELSEVRWFTREEAKALLAGQVEGLFCPPPLAIAHQLLKAWVEEG

Sequences:

>Translated_308_residues
MPLSAFTNTFAGNPLDRASDRRSDEAWLSSQLASAESLALAVWNGRPLVEKTSGGGVQIAYLPARLAGELSGGPERLLFL
GLWKETAVFAVDLEGFSDPTEGPLQGLGEFADLRQVALALPGPEAAICATAKSMFEWRRKHRRCANCGEPTDVKDAGWKR
QCPACETEHFPRTDPVVIMLPYHGGRCMLGRQEAWPKGMFSALAGFLEPGESIEEACARELSEEAGLRTLTVRYHSTQPW
PYPSSLMIGLLAEVEDDEGTPDQTELSEVRWFTREEAKALLAGQVEGLFCPPPLAIAHQLLKAWVEEG
>Mature_307_residues
PLSAFTNTFAGNPLDRASDRRSDEAWLSSQLASAESLALAVWNGRPLVEKTSGGGVQIAYLPARLAGELSGGPERLLFLG
LWKETAVFAVDLEGFSDPTEGPLQGLGEFADLRQVALALPGPEAAICATAKSMFEWRRKHRRCANCGEPTDVKDAGWKRQ
CPACETEHFPRTDPVVIMLPYHGGRCMLGRQEAWPKGMFSALAGFLEPGESIEEACARELSEEAGLRTLTVRYHSTQPWP
YPSSLMIGLLAEVEDDEGTPDQTELSEVRWFTREEAKALLAGQVEGLFCPPPLAIAHQLLKAWVEEG

Specific function: Unknown

COG id: COG2816

COG function: function code L; NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

Organism=Homo sapiens, GI13899267, Length=341, Percent_Identity=35.1906158357771, Blast_Score=188, Evalue=6e-48,
Organism=Homo sapiens, GI50593112, Length=212, Percent_Identity=40.5660377358491, Blast_Score=160, Evalue=1e-39,
Organism=Escherichia coli, GI48994995, Length=241, Percent_Identity=27.3858921161826, Blast_Score=107, Evalue=1e-24,
Organism=Caenorhabditis elegans, GI71986510, Length=223, Percent_Identity=30.4932735426009, Blast_Score=104, Evalue=6e-23,
Organism=Caenorhabditis elegans, GI212645999, Length=223, Percent_Identity=30.4932735426009, Blast_Score=103, Evalue=1e-22,
Organism=Saccharomyces cerevisiae, GI6321371, Length=376, Percent_Identity=25.2659574468085, Blast_Score=100, Evalue=2e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015375
- InterPro:   IPR022925
- InterPro:   IPR020084
- InterPro:   IPR000086
- InterPro:   IPR015797
- InterPro:   IPR015376 [H]

Pfam domain/function: PF00293 NUDIX; PF09296 NUDIX-like; PF09297 zf-NADH-PPase [H]

EC number: =3.6.1.22 [H]

Molecular weight: Translated: 33666; Mature: 33535

Theoretical pI: Translated: 4.58; Mature: 4.58

Prosite motif: PS00893 NUDIX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLSAFTNTFAGNPLDRASDRRSDEAWLSSQLASAESLALAVWNGRPLVEKTSGGGVQIA
CCCHHHHHHHCCCCCCHHHCCCCHHHHHHHHHHCCCCEEEEEECCCCCEEECCCCCEEEE
YLPARLAGELSGGPERLLFLGLWKETAVFAVDLEGFSDPTEGPLQGLGEFADLRQVALAL
EECHHHHHCCCCCCCEEEEEEECCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHC
PGPEAAICATAKSMFEWRRKHRRCANCGEPTDVKDAGWKRQCPACETEHFPRTDPVVIML
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE
PYHGGRCMLGRQEAWPKGMFSALAGFLEPGESIEEACARELSEEAGLRTLTVRYHSTQPW
ECCCCEEECCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEEEEECCCCC
PYPSSLMIGLLAEVEDDEGTPDQTELSEVRWFTREEAKALLAGQVEGLFCPPPLAIAHQL
CCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCHHHHHHH
LKAWVEEG
HHHHHHCC
>Mature Secondary Structure 
PLSAFTNTFAGNPLDRASDRRSDEAWLSSQLASAESLALAVWNGRPLVEKTSGGGVQIA
CCHHHHHHHCCCCCCHHHCCCCHHHHHHHHHHCCCCEEEEEECCCCCEEECCCCCEEEE
YLPARLAGELSGGPERLLFLGLWKETAVFAVDLEGFSDPTEGPLQGLGEFADLRQVALAL
EECHHHHHCCCCCCCEEEEEEECCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHC
PGPEAAICATAKSMFEWRRKHRRCANCGEPTDVKDAGWKRQCPACETEHFPRTDPVVIML
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE
PYHGGRCMLGRQEAWPKGMFSALAGFLEPGESIEEACARELSEEAGLRTLTVRYHSTQPW
ECCCCEEECCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEEEEECCCCC
PYPSSLMIGLLAEVEDDEGTPDQTELSEVRWFTREEAKALLAGQVEGLFCPPPLAIAHQL
CCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCHHHHHHH
LKAWVEEG
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]