| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197103794
Identifier: 197103794
GI number: 197103794
Start: 322668
End: 323561
Strand: Direct
Name: 197103794
Synonym: PHZ_c0328
Alternate gene names: NA
Gene position: 322668-323561 (Clockwise)
Preceding gene: 197103791
Following gene: 197103795
Centisome position: 8.07
GC content: 66.55
Gene sequence:
>894_bases TTGCCGCTGTTCTTCGGATCGGCTAGAAGCGGCCCCTTCGCGCGAGGCGGGCCGGGAGGGCGCGTCGGCGCTCCAGAGAT TCGAAGGTTTTCGATGTCCGAAACGACCCAAGTGCCCGCGGGCGGCGAGCTGACCGGCAGCGTCCTCTTCTACAACAAGC CCGAACCGCTGGCGCGCGAGCTGCACGGCAAGCTGGGCGTCAAGCGCATGGACGGCCCGTTCAAGTTCGCCAGGACCGGC CACGCCATCCCGCTGACCGTGGGCGAGTTCCCGCTGGCCGCCGTCAGCGGCCCGATCATCTTCGTCGGCGACGAGAAGCT GCCGATCGCGGTGATGGGCCTGAACGCCAACGAGAACATGTTCGTGCAGGACAACGGCCTGTTCGAGCCCGGCGTCTACA TCCCGGCCTATGTGCGCCGCTATCCGTTCGTGTTCGCCAACGACACCCAGAACAACCAGATGGTGCTGTGCGTCGACCGC GCGGCCGAGTTCGTGGTGGAAGGCGGCGACATGCCGTTCTTCGACGAGAAGGGCGAGCCCTCGGACTACACCAAGCAGTG CATCGAGTTCTGCAACAACTTCGAGGTCGAGCGTCAGCGGACCATGAGCTTCGTCCAGCTCCTCAAGGACCTCGACCTGT TCGAGACCAAGACCGCCCAGTTCACCCCCACCAACCCCGACGGCACGCCGGGCCAGCCGCAGAAGATCGCCGAGTACTTC GGCGTCTCCGAAGACAAGCTCGCCAAGCTGCCGTCCGAGAAGCTGGTCGAGCTGCGCGACAACGGCGCCCTTGGCCAGAT CTACGCCCACCTGCTGTCGCTGGTCGGCTGGGACCGCCTGGTGGCCATCGCCATGGCCCGCCAGGCCCAGCGCCCGGTGG CGGCGAACGGCTGA
Upstream 100 bases:
>100_bases TGCTCGAGGATGTCGGGATAGTAGATGGGCATGGGCGCTCCCTGCGATGGGGCGGGATTGAAGAGGCTTGGCCGTCCGGG CGCAAGCGGCGCGCCGTGAT
Downstream 100 bases:
>100_bases TCCCGATCCTCCCCTCCGAGGGAGGGGGACCACGAAGTGGTGGAGGGGGCTTCCGCTACGGCGCGCCCCCTCAGTCCCTT CGGGACAGCTCCCCCAGAGG
Product: SapC-related protein
Products: NA
Alternate protein names: SapC-Related Protein; SapC Protein; SapC Superfamily; SapC-Like Protein; SapC Related Protein; SapC Superfamily Protein; Sapc Family Protein
Number of amino acids: Translated: 297; Mature: 296
Protein sequence:
>297_residues MPLFFGSARSGPFARGGPGGRVGAPEIRRFSMSETTQVPAGGELTGSVLFYNKPEPLARELHGKLGVKRMDGPFKFARTG HAIPLTVGEFPLAAVSGPIIFVGDEKLPIAVMGLNANENMFVQDNGLFEPGVYIPAYVRRYPFVFANDTQNNQMVLCVDR AAEFVVEGGDMPFFDEKGEPSDYTKQCIEFCNNFEVERQRTMSFVQLLKDLDLFETKTAQFTPTNPDGTPGQPQKIAEYF GVSEDKLAKLPSEKLVELRDNGALGQIYAHLLSLVGWDRLVAIAMARQAQRPVAANG
Sequences:
>Translated_297_residues MPLFFGSARSGPFARGGPGGRVGAPEIRRFSMSETTQVPAGGELTGSVLFYNKPEPLARELHGKLGVKRMDGPFKFARTG HAIPLTVGEFPLAAVSGPIIFVGDEKLPIAVMGLNANENMFVQDNGLFEPGVYIPAYVRRYPFVFANDTQNNQMVLCVDR AAEFVVEGGDMPFFDEKGEPSDYTKQCIEFCNNFEVERQRTMSFVQLLKDLDLFETKTAQFTPTNPDGTPGQPQKIAEYF GVSEDKLAKLPSEKLVELRDNGALGQIYAHLLSLVGWDRLVAIAMARQAQRPVAANG >Mature_296_residues PLFFGSARSGPFARGGPGGRVGAPEIRRFSMSETTQVPAGGELTGSVLFYNKPEPLARELHGKLGVKRMDGPFKFARTGH AIPLTVGEFPLAAVSGPIIFVGDEKLPIAVMGLNANENMFVQDNGLFEPGVYIPAYVRRYPFVFANDTQNNQMVLCVDRA AEFVVEGGDMPFFDEKGEPSDYTKQCIEFCNNFEVERQRTMSFVQLLKDLDLFETKTAQFTPTNPDGTPGQPQKIAEYFG VSEDKLAKLPSEKLVELRDNGALGQIYAHLLSLVGWDRLVAIAMARQAQRPVAANG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32586; Mature: 32454
Theoretical pI: Translated: 5.22; Mature: 5.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLFFGSARSGPFARGGPGGRVGAPEIRRFSMSETTQVPAGGELTGSVLFYNKPEPLARE CCEEECCCCCCCCCCCCCCCCCCCHHHHEECCCCCCCCCCCCCEEEEEEEECCCCHHHHH LHGKLGVKRMDGPFKFARTGHAIPLTVGEFPLAAVSGPIIFVGDEKLPIAVMGLNANENM HHHHCCCEECCCCCHHHHCCCEEEEEECCCCHHHHCCCEEEECCCCCCEEEEEECCCCCE FVQDNGLFEPGVYIPAYVRRYPFVFANDTQNNQMVLCVDRAAEFVVEGGDMPFFDEKGEP EEECCCCCCCCCCHHHHHHHCCEEEECCCCCCEEEEEEECCCCCEEECCCCCCCCCCCCC SDYTKQCIEFCNNFEVERQRTMSFVQLLKDLDLFETKTAQFTPTNPDGTPGQPQKIAEYF HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCHHHHHHHH GVSEDKLAKLPSEKLVELRDNGALGQIYAHLLSLVGWDRLVAIAMARQAQRPVAANG CCCHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure PLFFGSARSGPFARGGPGGRVGAPEIRRFSMSETTQVPAGGELTGSVLFYNKPEPLARE CEEECCCCCCCCCCCCCCCCCCCHHHHEECCCCCCCCCCCCCEEEEEEEECCCCHHHHH LHGKLGVKRMDGPFKFARTGHAIPLTVGEFPLAAVSGPIIFVGDEKLPIAVMGLNANENM HHHHCCCEECCCCCHHHHCCCEEEEEECCCCHHHHCCCEEEECCCCCCEEEEEECCCCCE FVQDNGLFEPGVYIPAYVRRYPFVFANDTQNNQMVLCVDRAAEFVVEGGDMPFFDEKGEP EEECCCCCCCCCCHHHHHHHCCEEEECCCCCCEEEEEEECCCCCEEECCCCCCCCCCCCC SDYTKQCIEFCNNFEVERQRTMSFVQLLKDLDLFETKTAQFTPTNPDGTPGQPQKIAEYF HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCHHHHHHHH GVSEDKLAKLPSEKLVELRDNGALGQIYAHLLSLVGWDRLVAIAMARQAQRPVAANG CCCHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA