| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is fhuA [C]
Identifier: 197103789
GI number: 197103789
Start: 316472
End: 318844
Strand: Direct
Name: fhuA [C]
Synonym: PHZ_c0323
Alternate gene names: 197103789
Gene position: 316472-318844 (Clockwise)
Preceding gene: 197103787
Following gene: 197103790
Centisome position: 7.92
GC content: 66.62
Gene sequence:
>2373_bases ATGAAAATGCATCTGAGCCGCGCGCTCTGCGCGACGACGGCGCTTGCGACCGGCCTGCTGATGGCGGGCTCGGCCATGGC GCAATCCACCGGCACCGCGGTGGTCGAGGAACTGATCGTGACGGGCTCGATGGGCCCGCGCAACATGGACGGCGTGATCG TGGCCGAAAGCGAGCCCAAGTCTCGCGCCTCGATCACCCAGGAGTTCATCAGCCGGATGGCCCCGGGCCAGACGATCCTG GACACCATCAACCTGCTGCCGGCCGTCAACTTCACCAACAACGACGCCTTCGGCTCGGCCGGCGGCGACGTCGTGCTGCG CGGCTTCGACTCGCAGCGCATCGCCCTGCTGCAGGACGGCGTGCCGCTGAACGATTCCGGCAACTACGCCATCTACCCGA ACCAGCAGCTCGACTCGGACCTGATCGAGCGCGTGACGGTCAACCTCGGCACCACCGACGTCGACAGCCCGACCGCGGCG GCCGCGGGCGGCACCATCAACTACATCACCCGGCGCGCCGACGACGAGTTCGGCGTCCGCACCGAGGTCGGCCTGGGGTC GGTGAACTTCCAGCGCTACTACGCCACGGTCGAGACCGGCCGGGTCGGCCCCTGGGGCACCAAGGCCTGGATCAGCGGCC TCTACACCAAGAACGACATCTTCCGGCCGCATGACGCGACCCAGGATCCGGAAGGCAAGATCGAGAAGAAGCAGTTCAAC TTCCGCATCGACCAGGATCTCGGCGAAGACAGCTTCGTCAGCCTGATCGGTCACTGGAACCAGAACCGCAACAGCTTCAT CAACCGCATCAGCCTGGCCAACTACCGCGCCCGCGTCGCGCCGGTGAACGGCTTCCAGGCCGCCAACGAGAACATCAACC CGTCGAACACCGGCAACCTGCGGGCCCTGTCGAGCTTCAAGCTCAACGAGACCCTGACGCTGACCGTCGACCCGTCGTTC CAGTACGTGCTGGCCAACGGCGGCGGCGCCGGCAACTGGGCCGAGACCGACCTGCAGCTGCGCGGCAACTCGGGCGCGGC CGGCGTCGACCTGAACGGCGACGGCGACCTGAACGACACCGTCCGCCTCTATCGTCCGAACACGACGAACACCCGCCGCT ACGGCGTCACCTCGTCGCTGATCTGGAAGTTCGCCGACAACCAGAACGTCCGCCTCGCCTACACCTACGACAAGGCCAAC CACCGCCAGACCGGCGACGTGGGCTACATCGTGGACGGCAAGCCGGAAGACGTGTTCGGCGGCAAGGACGGCCGCGGCCG TCCGGTCCTGCTGCCCGACGGCACCAACCTGCGCCGCCGCGACCGCGCCTCGGTGGCCTACCTGAACCAGATCGCCGTCG AGTACCGCGGCCGCTTCCTCGAAGACCGGCTGCTGTTCAACGCCGGCCTGCGCGCGCCATTCTTCAAGCGCGACCTGAAC AACTTCTGCTACCAGAACAACACGTTCAACGCCTACTGCACGACCCAGGTCCCGACCATCGTGCCCGGCACCGACGACGG CACGGGCCGTCCGCTGGTCCGCTTCCCGGCCAGCGCGCTGAACTCGAACGCGAACAACCTCTACGGCCAGCCGCGCGAGT TCACCCGCAAGTACGACGACGTGCTGCCGAACGTGGGCGTCAGCTACGACCTGACCGACGACCTGACGATCTACGCCAGC TACGCCGAGACCCTCTCGGCGCCGCGCACCGACGACCTGTACGACCGGATCTCGGTCGATCCGGGCCCGGAAAGCGCCAA GGCCTATGACGCCGGCTTCCGCTTCAACCGCGGCGGCCTGATGGCTCAGGGCGCGGTCTGGTTCAACTCGTTCACGAACC GGATCGAGCGCGTGTTCGACGAAGCCTCGGGCATCGCGTTCTCGACCAACGTCGGCGACGTCGAGCTGTTCGGCGTCGAC TTCCAGGCCGGCTACGACATCAGCGAGAAGCTGAACGTCTACGGCGCGGCCTCGTACATCGAATCCGAGATCCAGGACGA CATCGTGGACGGCTCGACCGTCCTGCCGACCGAGGGCCGCTCGCTCTACGAGACCCCGACCTGGCAAGGCGTCTTCCGGG TCAACTACTACCCGACCGAGGACCTCTCCTTCGGCTGGCAGACCAAGTACACCGGCGCGCGCTGGTCGAACCTGGTCAAC ACCGAGAAGTTCCCCGACTACGTCCTCACCGACGTGGACGTGCGCTTCAAGCTGGACCGCTTCGGCATGGAGAACACCTA CCTCCAGGCCAACGTGCGGAACCTGTTCGACGAGCGCTACCTCGGCGACATGACCTCGAACCTGACCGGCACGGGCCTCG GCCAGCCGGGCTACCGCCGGACCTTCATCCTGACCCTGCACGCCGAGTTCTAA
Upstream 100 bases:
>100_bases GCGTCACCCACTCCTCCAAATTTGGCGTTATAGGGGCGCCCAAGACTCGCGGCCTCCGGAGGGGCGAAGGCCCGCGGCAG TCGATCGAGAGGGGATTTCG
Downstream 100 bases:
>100_bases GGCGCGCTCGGGTCCGGACGGACCGATGCGAGGGGCGGCCGCGGCGACGCGGCCGCCCCTTTCTCTTTGTCGCGGGATGC TTGACGGGGGGGTCCCGGGG
Product: TonB-dependent receptor
Products: NA
Alternate protein names: NB-Dependent Outer Membrane Receptor; NB-Dependent Siderophore Receptor; Nb-Dependent Receptor; NB-Dependent Receptor-Like Protein; NB-Dependent Receptor Domain Protein; Nb-Dependent Outer Membrane Receptor Protein; Outer Membrane Protein; NB-Dependent Receptor Plug; NB-Dependent Receptor Protein; Outer Membrane Receptor Protein; Ferrichrome Outer Membrane Transporter; NB Dependent Receptor Protein
Number of amino acids: Translated: 790; Mature: 790
Protein sequence:
>790_residues MKMHLSRALCATTALATGLLMAGSAMAQSTGTAVVEELIVTGSMGPRNMDGVIVAESEPKSRASITQEFISRMAPGQTIL DTINLLPAVNFTNNDAFGSAGGDVVLRGFDSQRIALLQDGVPLNDSGNYAIYPNQQLDSDLIERVTVNLGTTDVDSPTAA AAGGTINYITRRADDEFGVRTEVGLGSVNFQRYYATVETGRVGPWGTKAWISGLYTKNDIFRPHDATQDPEGKIEKKQFN FRIDQDLGEDSFVSLIGHWNQNRNSFINRISLANYRARVAPVNGFQAANENINPSNTGNLRALSSFKLNETLTLTVDPSF QYVLANGGGAGNWAETDLQLRGNSGAAGVDLNGDGDLNDTVRLYRPNTTNTRRYGVTSSLIWKFADNQNVRLAYTYDKAN HRQTGDVGYIVDGKPEDVFGGKDGRGRPVLLPDGTNLRRRDRASVAYLNQIAVEYRGRFLEDRLLFNAGLRAPFFKRDLN NFCYQNNTFNAYCTTQVPTIVPGTDDGTGRPLVRFPASALNSNANNLYGQPREFTRKYDDVLPNVGVSYDLTDDLTIYAS YAETLSAPRTDDLYDRISVDPGPESAKAYDAGFRFNRGGLMAQGAVWFNSFTNRIERVFDEASGIAFSTNVGDVELFGVD FQAGYDISEKLNVYGAASYIESEIQDDIVDGSTVLPTEGRSLYETPTWQGVFRVNYYPTEDLSFGWQTKYTGARWSNLVN TEKFPDYVLTDVDVRFKLDRFGMENTYLQANVRNLFDERYLGDMTSNLTGTGLGQPGYRRTFILTLHAEF
Sequences:
>Translated_790_residues MKMHLSRALCATTALATGLLMAGSAMAQSTGTAVVEELIVTGSMGPRNMDGVIVAESEPKSRASITQEFISRMAPGQTIL DTINLLPAVNFTNNDAFGSAGGDVVLRGFDSQRIALLQDGVPLNDSGNYAIYPNQQLDSDLIERVTVNLGTTDVDSPTAA AAGGTINYITRRADDEFGVRTEVGLGSVNFQRYYATVETGRVGPWGTKAWISGLYTKNDIFRPHDATQDPEGKIEKKQFN FRIDQDLGEDSFVSLIGHWNQNRNSFINRISLANYRARVAPVNGFQAANENINPSNTGNLRALSSFKLNETLTLTVDPSF QYVLANGGGAGNWAETDLQLRGNSGAAGVDLNGDGDLNDTVRLYRPNTTNTRRYGVTSSLIWKFADNQNVRLAYTYDKAN HRQTGDVGYIVDGKPEDVFGGKDGRGRPVLLPDGTNLRRRDRASVAYLNQIAVEYRGRFLEDRLLFNAGLRAPFFKRDLN NFCYQNNTFNAYCTTQVPTIVPGTDDGTGRPLVRFPASALNSNANNLYGQPREFTRKYDDVLPNVGVSYDLTDDLTIYAS YAETLSAPRTDDLYDRISVDPGPESAKAYDAGFRFNRGGLMAQGAVWFNSFTNRIERVFDEASGIAFSTNVGDVELFGVD FQAGYDISEKLNVYGAASYIESEIQDDIVDGSTVLPTEGRSLYETPTWQGVFRVNYYPTEDLSFGWQTKYTGARWSNLVN TEKFPDYVLTDVDVRFKLDRFGMENTYLQANVRNLFDERYLGDMTSNLTGTGLGQPGYRRTFILTLHAEF >Mature_790_residues MKMHLSRALCATTALATGLLMAGSAMAQSTGTAVVEELIVTGSMGPRNMDGVIVAESEPKSRASITQEFISRMAPGQTIL DTINLLPAVNFTNNDAFGSAGGDVVLRGFDSQRIALLQDGVPLNDSGNYAIYPNQQLDSDLIERVTVNLGTTDVDSPTAA AAGGTINYITRRADDEFGVRTEVGLGSVNFQRYYATVETGRVGPWGTKAWISGLYTKNDIFRPHDATQDPEGKIEKKQFN FRIDQDLGEDSFVSLIGHWNQNRNSFINRISLANYRARVAPVNGFQAANENINPSNTGNLRALSSFKLNETLTLTVDPSF QYVLANGGGAGNWAETDLQLRGNSGAAGVDLNGDGDLNDTVRLYRPNTTNTRRYGVTSSLIWKFADNQNVRLAYTYDKAN HRQTGDVGYIVDGKPEDVFGGKDGRGRPVLLPDGTNLRRRDRASVAYLNQIAVEYRGRFLEDRLLFNAGLRAPFFKRDLN NFCYQNNTFNAYCTTQVPTIVPGTDDGTGRPLVRFPASALNSNANNLYGQPREFTRKYDDVLPNVGVSYDLTDDLTIYAS YAETLSAPRTDDLYDRISVDPGPESAKAYDAGFRFNRGGLMAQGAVWFNSFTNRIERVFDEASGIAFSTNVGDVELFGVD FQAGYDISEKLNVYGAASYIESEIQDDIVDGSTVLPTEGRSLYETPTWQGVFRVNYYPTEDLSFGWQTKYTGARWSNLVN TEKFPDYVLTDVDVRFKLDRFGMENTYLQANVRNLFDERYLGDMTSNLTGTGLGQPGYRRTFILTLHAEF
Specific function: This Receptor Binds The Ferrichrome-Iron Ligand. It Interacts With The Tonb Protein, Which Is Responsible For Energy Coupling Of The Ferrichrome-Promoted Iron Transport System. Acts As A Receptor For Bacteriophage T5 As Well As T1, Phi80 And Colicin M. B
COG id: COG1629
COG function: function code P; Outer membrane receptor proteins, mostly Fe transport
Gene ontology:
Cell location: Integral Membrane Protein. Outer Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786344, Length=223, Percent_Identity=25.5605381165919, Blast_Score=67, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 87278; Mature: 87278
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: PS01128 SHIKIMATE_KINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKMHLSRALCATTALATGLLMAGSAMAQSTGTAVVEELIVTGSMGPRNMDGVIVAESEPK CCCCHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHCCCCCCCCCCCEEEECCCCC SRASITQEFISRMAPGQTILDTINLLPAVNFTNNDAFGSAGGDVVLRGFDSQRIALLQDG HHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEECC VPLNDSGNYAIYPNQQLDSDLIERVTVNLGTTDVDSPTAAAAGGTINYITRRADDEFGVR CCCCCCCCEEECCCCCCCHHHHHHEEEECCCCCCCCCCCHHCCCEEEEEEECCCCCCCCE TEVGLGSVNFQRYYATVETGRVGPWGTKAWISGLYTKNDIFRPHDATQDPEGKIEKKQFN EECCCCCEEEEEEEEEEECCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEE FRIDQDLGEDSFVSLIGHWNQNRNSFINRISLANYRARVAPVNGFQAANENINPSNTGNL EEECCCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCE RALSSFKLNETLTLTVDPSFQYVLANGGGAGNWAETDLQLRGNSGAAGVDLNGDGDLNDT EEEEEEECCCEEEEEECCCEEEEEECCCCCCCCCCCEEEEECCCCCCEEECCCCCCCCCC VRLYRPNTTNTRRYGVTSSLIWKFADNQNVRLAYTYDKANHRQTGDVGYIVDGKPEDVFG EEEECCCCCCCEEECCCHHEEEEECCCCCEEEEEEECCCCCCCCCCEEEEECCCCCCCCC GKDGRGRPVLLPDGTNLRRRDRASVAYLNQIAVEYRGRFLEDRLLFNAGLRAPFFKRDLN CCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHH NFCYQNNTFNAYCTTQVPTIVPGTDDGTGRPLVRFPASALNSNANNLYGQPREFTRKYDD HHHCCCCCEEEEECCCCCEEECCCCCCCCCCEEECCHHHHCCCCHHCCCCCHHHHHHHHH VLPNVGVSYDLTDDLTIYASYAETLSAPRTDDLYDRISVDPGPESAKAYDAGFRFNRGGL HCCCCCCEEECCCCEEEEEEHHHHHCCCCCCCHHHHCCCCCCCCCCCCCCCCCEECCCCC MAQGAVWFNSFTNRIERVFDEASGIAFSTNVGDVELFGVDFQAGYDISEKLNVYGAASYI EECCHHHHHHHHHHHHHHHHHHCCEEEECCCCCEEEEEEEECCCCCHHHHHEEEEHHHHH ESEIQDDIVDGSTVLPTEGRSLYETPTWQGVFRVNYYPTEDLSFGWQTKYTGARWSNLVN HHHHHHHHCCCCEECCCCCCCEECCCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHCCC TEKFPDYVLTDVDVRFKLDRFGMENTYLQANVRNLFDERYLGDMTSNLTGTGLGQPGYRR CCCCCCEEEECCEEEEEEECCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCE TFILTLHAEF EEEEEEEECC >Mature Secondary Structure MKMHLSRALCATTALATGLLMAGSAMAQSTGTAVVEELIVTGSMGPRNMDGVIVAESEPK CCCCHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHCCCCCCCCCCCEEEECCCCC SRASITQEFISRMAPGQTILDTINLLPAVNFTNNDAFGSAGGDVVLRGFDSQRIALLQDG HHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEECC VPLNDSGNYAIYPNQQLDSDLIERVTVNLGTTDVDSPTAAAAGGTINYITRRADDEFGVR CCCCCCCCEEECCCCCCCHHHHHHEEEECCCCCCCCCCCHHCCCEEEEEEECCCCCCCCE TEVGLGSVNFQRYYATVETGRVGPWGTKAWISGLYTKNDIFRPHDATQDPEGKIEKKQFN EECCCCCEEEEEEEEEEECCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEE FRIDQDLGEDSFVSLIGHWNQNRNSFINRISLANYRARVAPVNGFQAANENINPSNTGNL EEECCCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCE RALSSFKLNETLTLTVDPSFQYVLANGGGAGNWAETDLQLRGNSGAAGVDLNGDGDLNDT EEEEEEECCCEEEEEECCCEEEEEECCCCCCCCCCCEEEEECCCCCCEEECCCCCCCCCC VRLYRPNTTNTRRYGVTSSLIWKFADNQNVRLAYTYDKANHRQTGDVGYIVDGKPEDVFG EEEECCCCCCCEEECCCHHEEEEECCCCCEEEEEEECCCCCCCCCCEEEEECCCCCCCCC GKDGRGRPVLLPDGTNLRRRDRASVAYLNQIAVEYRGRFLEDRLLFNAGLRAPFFKRDLN CCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHH NFCYQNNTFNAYCTTQVPTIVPGTDDGTGRPLVRFPASALNSNANNLYGQPREFTRKYDD HHHCCCCCEEEEECCCCCEEECCCCCCCCCCEEECCHHHHCCCCHHCCCCCHHHHHHHHH VLPNVGVSYDLTDDLTIYASYAETLSAPRTDDLYDRISVDPGPESAKAYDAGFRFNRGGL HCCCCCCEEECCCCEEEEEEHHHHHCCCCCCCHHHHCCCCCCCCCCCCCCCCCEECCCCC MAQGAVWFNSFTNRIERVFDEASGIAFSTNVGDVELFGVDFQAGYDISEKLNVYGAASYI EECCHHHHHHHHHHHHHHHHHHCCEEEECCCCCEEEEEEEECCCCCHHHHHEEEEHHHHH ESEIQDDIVDGSTVLPTEGRSLYETPTWQGVFRVNYYPTEDLSFGWQTKYTGARWSNLVN HHHHHHHHCCCCEECCCCCCCEECCCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHCCC TEKFPDYVLTDVDVRFKLDRFGMENTYLQANVRNLFDERYLGDMTSNLTGTGLGQPGYRR CCCCCCEEEECCEEEEEEECCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCE TFILTLHAEF EEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA