| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197103788
Identifier: 197103788
GI number: 197103788
Start: 314730
End: 316262
Strand: Reverse
Name: 197103788
Synonym: PHZ_c0322
Alternate gene names: NA
Gene position: 316262-314730 (Counterclockwise)
Preceding gene: 197103792
Following gene: 197103783
Centisome position: 7.91
GC content: 73.65
Gene sequence:
>1533_bases ATGACAGACACCGCGCGCCTGCGAGCGCCCGACGACTGGCGGGCGGCGATCCTGCTCACCGCGGGACTGACGCTCGTGCG CCTGGTGGTCCTGTTCGCCAGCCCCCTCGAGCTCTACCCGGACGAGGCCCAGTACTGGCTTTGGTCGCGCACGCTCGACT TCGGCTACTACTCCAAGCCGCCGATGGTCGCCTGGGCGATCTGGGCCACCACCGCGATCGGCGGGAACGCCGAGCCGTGG GTGCGGCTCTCGGCAGGCCTGTTCCAGGCCGGCGCCATGCTGACGGTCTTCGCCATCGGCCGGCGGCTGTACGATTCGCG CACGGCCCTGGCGGCGGCGGCGCTGTACGGCCTGATGCCGGGCGTGCAGCTCTCGTCGCTGGTCGCCGCCACCGACGCGC CGCTGCTGTTCTTCCTTGCCCTGACGATCCTGGCCTACGCCGCCCTGCAGACGGCGGAAGGCCGGGCCGGCGTGCGCGTC GCCGCGGGCCTCGGCGCGGCGCTGGGGCTGGCCTTCCTCAGCAAGTACGCGGCCGTCTACTTCGTCGTCGGCCTTGCGCT GCACCTGGCGCTGTCGCGGCAGGCGCGGGCCGCCTGGAGCCTGCCCCGGGCCGCCGCCGCCGCCGGGGCCTTCGCCCTGA TGCTGGCCCCCAACCTCGCCTGGAACGCCGCGCACGGGTTCGCCACCTTCCAGCATACGGCCGCCAACGCCGCCTGGGGC GGGCGCAAGCTGTTCAACTTCGGCGAGCTCGGGGAATTCCTCGCCTCCCAGTTCGGGGTGTTCGGGCCGATCCCCATGGG CGTCCTGCTGGTGGGCCTCGCGCTGGCGGCGCTGCGCCGGCGGCTGTCGCGGCAGGACCTTCTGCTGCTGTGCTTCACCC TGCCGCCGCTGCTGATCGTCACCGGCCAGTCGTTCATCAGCCGGGCCAACGCCAACTGGTCCGGGGCGGGCTATCTCGCC GGCTCGGTGCTGGTCGCCGCCTGGCTGATGCGCTGGCGCGCCAGGAGCTGGCTGATCGGCGCGCTGTCCCTGCAGGCGGC GGTCGCGGCGGCGTTCTTCGCCTTCGTCATCTCGCCGCCCCTGGCCGAGCGGGCGGGGATGGCCAACGCCTTCAAGCGGG CCAAGGGCTGGGGCGAGACCACCGACGTCATCCTGCGGCGGGCGGCGCTGGAGCCGGGGCTCTCGGCAATCGCCGTCAAC GACCGGTTCCTGTTCTACGCCCTCTCCTACTACGGCCGCGACGCGCTCGCGGCGGGCGCCCCGCCGCTGCGCAGCTGGCT GCTGATGGAGACGCCGCAGAACCAAGCCGAGACCAGCGCCCCGCTGACGGCGGCCGAGGGCCGGCGCGTGCTGGCCGTCG CGCTGGAGGGCGTCTACCGGCCGCAGATGGAGGCCGACTTCCGGCAGGCCTCGGGCCTGGAGATCGCCAGCGTCTGGCTG GACCGCAAGCGCAAGCGGCGGATCGAGATGTTCGTCGCCGAGGACTACGCCCCCCGCCCGCGCGATCCGGCGACCGGCCT GCCGGCGATGTGA
Upstream 100 bases:
>100_bases GGTTCGCCGGACTCCGTCCGGATGCGTCGAAAGGCGGCGCCAGTGTGCTTTACAGCACACGCCACAGGGTTACCGTCCGC GTCCCTTCGAAGGACCTGGC
Downstream 100 bases:
>100_bases GGCGGGCTCACCGCCCCCAGACGACCCCCAGCCACCGGTCGCGGCCGCAGCCCACGCGGTAGCGCTCGTAGGCGGCCGGG TTCTTCTTCGCGTAGTCCTG
Product: 4-amino-4-deoxy-L-arabinose transferase
Products: NA
Alternate protein names: Dolichyl-Phosphate-Mannose-Protein Mannosyltransferase; Glycosyl Transferase Family Protein; 4-Amino-4-Deoxy-L-Arabinose Transferase; Dolichyl-Phosphate Beta-D-Mannosyltransferase; Glycosyltransferase Family; Undecaprenyl-PhosphomannoseProtein Mannosyltransferase; Glycosyltransferase; Family; Glycosyltransferase Protein; Transmembrane Protein; Dolichol Monophosphate Mannose Synthase; Glycosyl Transferase
Number of amino acids: Translated: 510; Mature: 509
Protein sequence:
>510_residues MTDTARLRAPDDWRAAILLTAGLTLVRLVVLFASPLELYPDEAQYWLWSRTLDFGYYSKPPMVAWAIWATTAIGGNAEPW VRLSAGLFQAGAMLTVFAIGRRLYDSRTALAAAALYGLMPGVQLSSLVAATDAPLLFFLALTILAYAALQTAEGRAGVRV AAGLGAALGLAFLSKYAAVYFVVGLALHLALSRQARAAWSLPRAAAAAGAFALMLAPNLAWNAAHGFATFQHTAANAAWG GRKLFNFGELGEFLASQFGVFGPIPMGVLLVGLALAALRRRLSRQDLLLLCFTLPPLLIVTGQSFISRANANWSGAGYLA GSVLVAAWLMRWRARSWLIGALSLQAAVAAAFFAFVISPPLAERAGMANAFKRAKGWGETTDVILRRAALEPGLSAIAVN DRFLFYALSYYGRDALAAGAPPLRSWLLMETPQNQAETSAPLTAAEGRRVLAVALEGVYRPQMEADFRQASGLEIASVWL DRKRKRRIEMFVAEDYAPRPRDPATGLPAM
Sequences:
>Translated_510_residues MTDTARLRAPDDWRAAILLTAGLTLVRLVVLFASPLELYPDEAQYWLWSRTLDFGYYSKPPMVAWAIWATTAIGGNAEPW VRLSAGLFQAGAMLTVFAIGRRLYDSRTALAAAALYGLMPGVQLSSLVAATDAPLLFFLALTILAYAALQTAEGRAGVRV AAGLGAALGLAFLSKYAAVYFVVGLALHLALSRQARAAWSLPRAAAAAGAFALMLAPNLAWNAAHGFATFQHTAANAAWG GRKLFNFGELGEFLASQFGVFGPIPMGVLLVGLALAALRRRLSRQDLLLLCFTLPPLLIVTGQSFISRANANWSGAGYLA GSVLVAAWLMRWRARSWLIGALSLQAAVAAAFFAFVISPPLAERAGMANAFKRAKGWGETTDVILRRAALEPGLSAIAVN DRFLFYALSYYGRDALAAGAPPLRSWLLMETPQNQAETSAPLTAAEGRRVLAVALEGVYRPQMEADFRQASGLEIASVWL DRKRKRRIEMFVAEDYAPRPRDPATGLPAM >Mature_509_residues TDTARLRAPDDWRAAILLTAGLTLVRLVVLFASPLELYPDEAQYWLWSRTLDFGYYSKPPMVAWAIWATTAIGGNAEPWV RLSAGLFQAGAMLTVFAIGRRLYDSRTALAAAALYGLMPGVQLSSLVAATDAPLLFFLALTILAYAALQTAEGRAGVRVA AGLGAALGLAFLSKYAAVYFVVGLALHLALSRQARAAWSLPRAAAAAGAFALMLAPNLAWNAAHGFATFQHTAANAAWGG RKLFNFGELGEFLASQFGVFGPIPMGVLLVGLALAALRRRLSRQDLLLLCFTLPPLLIVTGQSFISRANANWSGAGYLAG SVLVAAWLMRWRARSWLIGALSLQAAVAAAFFAFVISPPLAERAGMANAFKRAKGWGETTDVILRRAALEPGLSAIAVND RFLFYALSYYGRDALAAGAPPLRSWLLMETPQNQAETSAPLTAAEGRRVLAVALEGVYRPQMEADFRQASGLEIASVWLD RKRKRRIEMFVAEDYAPRPRDPATGLPAM
Specific function: Unknown
COG id: COG1807
COG function: function code M; 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54851; Mature: 54720
Theoretical pI: Translated: 10.46; Mature: 10.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDTARLRAPDDWRAAILLTAGLTLVRLVVLFASPLELYPDEAQYWLWSRTLDFGYYSKP CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCHHEEEEEEEECCCCCCCC PMVAWAIWATTAIGGNAEPWVRLSAGLFQAGAMLTVFAIGRRLYDSRTALAAAALYGLMP CCEEEHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GVQLSSLVAATDAPLLFFLALTILAYAALQTAEGRAGVRVAAGLGAALGLAFLSKYAAVY CCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHH FVVGLALHLALSRQARAAWSLPRAAAAAGAFALMLAPNLAWNAAHGFATFQHTAANAAWG HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCC GRKLFNFGELGEFLASQFGVFGPIPMGVLLVGLALAALRRRLSRQDLLLLCFTLPPLLIV CCHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCEEE TGQSFISRANANWSGAGYLAGSVLVAAWLMRWRARSWLIGALSLQAAVAAAFFAFVISPP CCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC LAERAGMANAFKRAKGWGETTDVILRRAALEPGLSAIAVNDRFLFYALSYYGRDALAAGA HHHHCCHHHHHHHHCCCCCHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHCCHHHHCCC PPLRSWLLMETPQNQAETSAPLTAAEGRRVLAVALEGVYRPQMEADFRQASGLEIASVWL CHHHHHEEEECCCCCCCCCCCCCHHCCCEEEEEHHHHHCCCCHHHHHHHHCCCHHHHHHH DRKRKRRIEMFVAEDYAPRPRDPATGLPAM HHHHHHHHHHEEECCCCCCCCCCCCCCCCC >Mature Secondary Structure TDTARLRAPDDWRAAILLTAGLTLVRLVVLFASPLELYPDEAQYWLWSRTLDFGYYSKP CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCHHEEEEEEEECCCCCCCC PMVAWAIWATTAIGGNAEPWVRLSAGLFQAGAMLTVFAIGRRLYDSRTALAAAALYGLMP CCEEEHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GVQLSSLVAATDAPLLFFLALTILAYAALQTAEGRAGVRVAAGLGAALGLAFLSKYAAVY CCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHH FVVGLALHLALSRQARAAWSLPRAAAAAGAFALMLAPNLAWNAAHGFATFQHTAANAAWG HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCC GRKLFNFGELGEFLASQFGVFGPIPMGVLLVGLALAALRRRLSRQDLLLLCFTLPPLLIV CCHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCEEE TGQSFISRANANWSGAGYLAGSVLVAAWLMRWRARSWLIGALSLQAAVAAAFFAFVISPP CCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC LAERAGMANAFKRAKGWGETTDVILRRAALEPGLSAIAVNDRFLFYALSYYGRDALAAGA HHHHCCHHHHHHHHCCCCCHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHCCHHHHCCC PPLRSWLLMETPQNQAETSAPLTAAEGRRVLAVALEGVYRPQMEADFRQASGLEIASVWL CHHHHHEEEECCCCCCCCCCCCCHHCCCEEEEEHHHHHCCCCHHHHHHHHCCCHHHHHHH DRKRKRRIEMFVAEDYAPRPRDPATGLPAM HHHHHHHHHHEEECCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA