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The map label for this gene is msrA [H]

Identifier: 197103786

GI number: 197103786

Start: 313412

End: 314065

Strand: Direct

Name: msrA [H]

Synonym: PHZ_c0320

Alternate gene names: 197103786

Gene position: 313412-314065 (Clockwise)

Preceding gene: 197103785

Following gene: 197103787

Centisome position: 7.84

GC content: 69.11

Gene sequence:

>654_bases
ATGGCCTGGACCCGTGACCAGATCGCCGCCCGCGCCGCCCAGGAACTGCGCGACGGCTTCTACGTGAACCTCGGCATCGG
AATCCCGACGCTGACCGCCAACTACATCCCCGCGGGCATGCAGGTGACCCTGCAGTCCGAGAACGGCATGCTGGGCATGG
GCCCCTTCCCCTACGAGGGCGAGGCCGATCCCGACCTGATCAACGCCGGCAAGCAGACCATCACCGAGCTGCCGATGAGC
AGCTACTTCAGCTCGGCCGACAGCTTCGCCATGATCCGCGGCGGCCACATCGACCTGTCCATCCTGGGCGCGATGCAGGT
GGCCGCCAACGGCGACCTCGCCAACTGGATGGTCCCCGGCAAGATGGTGAAGGGGATGGGCGGCGCCATGGACCTGGTGG
CCGGCGTCAAGCGCGTGGTCGTCGTCATGGAGCACGTCGAGAAGTCCGGCGCGCCCAAGCTGGTGAAGGCCTGCTCGCTG
CCGCTGACCGGCGCCGGCGTGGTGGACCTCGTCATCACGGACCTGGCCGTATTCGACGTCGCCCGGGGCCGGAAGCCGCT
CACCCTGCTGGAGCTCGCCCCCGGCGTCACGCTCGACGAGGTGAAGGCCAAGACCGAGGCCCCGTTCGAGGTCGCCGAGA
CGGTCGCCGCGTAG

Upstream 100 bases:

>100_bases
ATCCACACGCCGGGCGTCTACGTCGACCGGATTCTTCAGGGGACGTTCGAGAAGCGCATCGAACAGCTCACCGTCCGCAA
GCGCGAGGAGGCGTAAGGCC

Downstream 100 bases:

>100_bases
GGGGCTCAGGCGGCCGGCTGCATCCGCCAGGCGGCGGGGCGCGTACCTCACGTGACCCCTGCCTCCGGGAGTGGCATCCT
GCCGACCATGAGACCCCGCA

Product: peptide methionine sulfoxide reductase MsrA

Products: NA

Alternate protein names: OXCT B; Succinyl CoA:3-oxoacid CoA-transferase [H]

Number of amino acids: Translated: 217; Mature: 216

Protein sequence:

>217_residues
MAWTRDQIAARAAQELRDGFYVNLGIGIPTLTANYIPAGMQVTLQSENGMLGMGPFPYEGEADPDLINAGKQTITELPMS
SYFSSADSFAMIRGGHIDLSILGAMQVAANGDLANWMVPGKMVKGMGGAMDLVAGVKRVVVVMEHVEKSGAPKLVKACSL
PLTGAGVVDLVITDLAVFDVARGRKPLTLLELAPGVTLDEVKAKTEAPFEVAETVAA

Sequences:

>Translated_217_residues
MAWTRDQIAARAAQELRDGFYVNLGIGIPTLTANYIPAGMQVTLQSENGMLGMGPFPYEGEADPDLINAGKQTITELPMS
SYFSSADSFAMIRGGHIDLSILGAMQVAANGDLANWMVPGKMVKGMGGAMDLVAGVKRVVVVMEHVEKSGAPKLVKACSL
PLTGAGVVDLVITDLAVFDVARGRKPLTLLELAPGVTLDEVKAKTEAPFEVAETVAA
>Mature_216_residues
AWTRDQIAARAAQELRDGFYVNLGIGIPTLTANYIPAGMQVTLQSENGMLGMGPFPYEGEADPDLINAGKQTITELPMSS
YFSSADSFAMIRGGHIDLSILGAMQVAANGDLANWMVPGKMVKGMGGAMDLVAGVKRVVVVMEHVEKSGAPKLVKACSLP
LTGAGVVDLVITDLAVFDVARGRKPLTLLELAPGVTLDEVKAKTEAPFEVAETVAA

Specific function: SHORT-CHAIN FATTY ACIDS METABOLISM. [C]

COG id: COG2057

COG function: function code I; Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 3-oxoacid CoA-transferase subunit B family [H]

Homologues:

Organism=Homo sapiens, GI4557817, Length=209, Percent_Identity=59.8086124401914, Blast_Score=254, Evalue=5e-68,
Organism=Homo sapiens, GI11545841, Length=209, Percent_Identity=60.2870813397129, Blast_Score=253, Evalue=8e-68,
Organism=Escherichia coli, GI1788552, Length=208, Percent_Identity=55.2884615384615, Blast_Score=228, Evalue=2e-61,
Organism=Caenorhabditis elegans, GI17531517, Length=213, Percent_Identity=57.7464788732394, Blast_Score=251, Evalue=2e-67,
Organism=Drosophila melanogaster, GI21358325, Length=209, Percent_Identity=60.7655502392344, Blast_Score=269, Evalue=1e-72,
Organism=Drosophila melanogaster, GI24655794, Length=209, Percent_Identity=60.7655502392344, Blast_Score=268, Evalue=2e-72,

Paralogues:

None

Copy number: 369 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012791
- InterPro:   IPR004165
- InterPro:   IPR004164 [H]

Pfam domain/function: PF01144 CoA_trans [H]

EC number: =2.8.3.5 [H]

Molecular weight: Translated: 22791; Mature: 22660

Theoretical pI: Translated: 4.59; Mature: 4.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAWTRDQIAARAAQELRDGFYVNLGIGIPTLTANYIPAGMQVTLQSENGMLGMGPFPYEG
CCCCHHHHHHHHHHHHHCCEEEEECCCCCCHHHCCCCCCEEEEEECCCCEEECCCCCCCC
EADPDLINAGKQTITELPMSSYFSSADSFAMIRGGHIDLSILGAMQVAANGDLANWMVPG
CCCHHHHHCCHHHHHHCCHHHHHCCCCCEEEEECCCEEEEEEEEEHHHCCCCCCCCCCCH
KMVKGMGGAMDLVAGVKRVVVVMEHVEKSGAPKLVKACSLPLTGAGVVDLVITDLAVFDV
HHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHH
ARGRKPLTLLELAPGVTLDEVKAKTEAPFEVAETVAA
HCCCCCEEEEECCCCCCHHHHHHCCCCCHHHHHHHCC
>Mature Secondary Structure 
AWTRDQIAARAAQELRDGFYVNLGIGIPTLTANYIPAGMQVTLQSENGMLGMGPFPYEG
CCCHHHHHHHHHHHHHCCEEEEECCCCCCHHHCCCCCCEEEEEECCCCEEECCCCCCCC
EADPDLINAGKQTITELPMSSYFSSADSFAMIRGGHIDLSILGAMQVAANGDLANWMVPG
CCCHHHHHCCHHHHHHCCHHHHHCCCCCEEEEECCCEEEEEEEEEHHHCCCCCCCCCCCH
KMVKGMGGAMDLVAGVKRVVVVMEHVEKSGAPKLVKACSLPLTGAGVVDLVITDLAVFDV
HHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHH
ARGRKPLTLLELAPGVTLDEVKAKTEAPFEVAETVAA
HCCCCCEEEEECCCCCCHHHHHHCCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9385134 [H]