Click here to switch to the map view.

The map label for this gene is 197103682

Identifier: 197103682

GI number: 197103682

Start: 214159

End: 214926

Strand: Reverse

Name: 197103682

Synonym: PHZ_c0216

Alternate gene names: NA

Gene position: 214926-214159 (Counterclockwise)

Preceding gene: 197103684

Following gene: 197103675

Centisome position: 5.38

GC content: 74.74

Gene sequence:

>768_bases
ATGCCATCGACCGTCCTTCGAGCCTGGACCTCCCCGCGCTTCGCCAGCCTCGGCGGGGCGATCGCGCTGGGCGTGTTCCT
GGGGTTCGCCGGGCCGTTCGGCTCGTTCCAGTCGCTCGCGCCCCCGGAGCGCTACGCCTTCTGGTTCGCCCTGGTGGCGG
CGGGCTACGGGCTGGCGCTCGCCACCCTGCAGATCCTGCGCCCGGCGGCGGCGTTCGCCCGCCTGCCGACCGTCGCCGCC
GTCATCGTCCTGGGGGCGGTCTCGACCGTGCCGATGATGTTCGTCACGGCCTGGGCGCTCGAGGTCGTGTTCGCGCGCTC
GACCCCGCCGGGACGCCTGGCGTCGCTCTATCTCTCGGTCGCGTCGGTCCAGCTGGTCATCGCCGCGCTTGCCTTGTGGC
CGTCTCTGGCGCCCCGCAGGCCGGCGCCGCCGGCGGAGGACGGGGCCGCCGACCGGTTCTTCGCGCGCGTGCCCGAGCGG
CTGGGGCGGGACCTGTTGGCCCTCGAGGCCCAGGACCACTACCTGATGGTCCACACCCGGCGGGGGTCGACCCTCATCTC
CATGCAGCTCAGCGAAGCCATGCAGATCCTGCCGCCGCAGCTCGGCCTTCAGGCGCACCGGCGCTGGTGGGTCGCGCGCC
GGGAGGTCCGCGGATTGCGCCGCGAGGGCGACCGGACGCTGATCGAGCTGACGGGGGGCCTGACCGTCCCGGTCGGCAGG
ACCTATCTCGCGGCGGTCCGCGCGGGCCTGGGGCCGGGCAGCGCCTGA

Upstream 100 bases:

>100_bases
CGGAGGATGACGGCGGAGGTGGGGGAAGGCGCGCGCATCCGGCCCGCTCGACAACGCCGGGCCCGGCGCATAGCGTTTCG
CCTTTCGCCAGCCGCGCAAG

Downstream 100 bases:

>100_bases
GGGCGTTCCCCCCAGAGGGCCGCCTGTGGCGTCGCCGAAAATTCCGGGCGCGCGAATGACATTGGCGGATCGGGCGGTTG
TCCGCGGGCGGCGAGCTGTT

Product: response regulator,LytR/AlgR family

Products: NA

Alternate protein names: Sensory Transduction Protein LytT; LytR/AlgR Family Transcriptional Regulator; Transcriptional Regulator LytR/AlgR Family; Response Regulator LytR/AlgR Family; LytR/AlgR-Family Transcriptional Regulator; Response Regulator Of LytR/AlgR Family

Number of amino acids: Translated: 255; Mature: 254

Protein sequence:

>255_residues
MPSTVLRAWTSPRFASLGGAIALGVFLGFAGPFGSFQSLAPPERYAFWFALVAAGYGLALATLQILRPAAAFARLPTVAA
VIVLGAVSTVPMMFVTAWALEVVFARSTPPGRLASLYLSVASVQLVIAALALWPSLAPRRPAPPAEDGAADRFFARVPER
LGRDLLALEAQDHYLMVHTRRGSTLISMQLSEAMQILPPQLGLQAHRRWWVARREVRGLRREGDRTLIELTGGLTVPVGR
TYLAAVRAGLGPGSA

Sequences:

>Translated_255_residues
MPSTVLRAWTSPRFASLGGAIALGVFLGFAGPFGSFQSLAPPERYAFWFALVAAGYGLALATLQILRPAAAFARLPTVAA
VIVLGAVSTVPMMFVTAWALEVVFARSTPPGRLASLYLSVASVQLVIAALALWPSLAPRRPAPPAEDGAADRFFARVPER
LGRDLLALEAQDHYLMVHTRRGSTLISMQLSEAMQILPPQLGLQAHRRWWVARREVRGLRREGDRTLIELTGGLTVPVGR
TYLAAVRAGLGPGSA
>Mature_254_residues
PSTVLRAWTSPRFASLGGAIALGVFLGFAGPFGSFQSLAPPERYAFWFALVAAGYGLALATLQILRPAAAFARLPTVAAV
IVLGAVSTVPMMFVTAWALEVVFARSTPPGRLASLYLSVASVQLVIAALALWPSLAPRRPAPPAEDGAADRFFARVPERL
GRDLLALEAQDHYLMVHTRRGSTLISMQLSEAMQILPPQLGLQAHRRWWVARREVRGLRREGDRTLIELTGGLTVPVGRT
YLAAVRAGLGPGSA

Specific function: Unknown

COG id: COG3279

COG function: function code KT; Response regulator of the LytR/AlgR family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27334; Mature: 27203

Theoretical pI: Translated: 11.91; Mature: 11.91

Prosite motif: PS50930 HTH_LYTTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSTVLRAWTSPRFASLGGAIALGVFLGFAGPFGSFQSLAPPERYAFWFALVAAGYGLAL
CCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
ATLQILRPAAAFARLPTVAAVIVLGAVSTVPMMFVTAWALEVVFARSTPPGRLASLYLSV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
ASVQLVIAALALWPSLAPRRPAPPAEDGAADRFFARVPERLGRDLLALEAQDHYLMVHTR
HHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHEEEECCCCEEEEEEC
RGSTLISMQLSEAMQILPPQLGLQAHRRWWVARREVRGLRREGDRTLIELTGGLTVPVGR
CCCEEEHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCEECCCHH
TYLAAVRAGLGPGSA
HHHHHHHHCCCCCCC
>Mature Secondary Structure 
PSTVLRAWTSPRFASLGGAIALGVFLGFAGPFGSFQSLAPPERYAFWFALVAAGYGLAL
CCHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
ATLQILRPAAAFARLPTVAAVIVLGAVSTVPMMFVTAWALEVVFARSTPPGRLASLYLSV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
ASVQLVIAALALWPSLAPRRPAPPAEDGAADRFFARVPERLGRDLLALEAQDHYLMVHTR
HHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHEEEECCCCEEEEEEC
RGSTLISMQLSEAMQILPPQLGLQAHRRWWVARREVRGLRREGDRTLIELTGGLTVPVGR
CCCEEEHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCEECCCHH
TYLAAVRAGLGPGSA
HHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA