| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197103599
Identifier: 197103599
GI number: 197103599
Start: 125499
End: 126062
Strand: Direct
Name: 197103599
Synonym: PHZ_c0133
Alternate gene names: NA
Gene position: 125499-126062 (Clockwise)
Preceding gene: 197103598
Following gene: 197103604
Centisome position: 3.14
GC content: 73.58
Gene sequence:
>564_bases ATGGCCAAAGGCAAGGCGCGTGCGAAGGCCGGCGTGGCCGCCCTCGACGGCTCGCCCAGTCATCTGCTGCATCGGGCGCT GCAGCGGGCGCTCGACGAATACGCCGCCGAGTTCGGCGCCGGCGCGATCACCCAGCGCCAGTACGCGGTCCTGGCGGCGG TCGCCGCCCAGGAGGGGGCGACCCAAACCGACCTCGTCCGCGCCACCGGCATCGACCGCTCGACCCTCGCCGACATGGCC GCCCGGATGATCGCGAAGGGCCTGCTGGCCCGGGAGCGCTCGACCGCCGACGCCCGCGCCAACGCCGTGCGCCTGACGCC CGAGGGCCAGGCCGCCCTGGCCGAGGCCCAGCCGAAGATGGCCGCGGTGGACGGCCGGCTGCTGAAGCTGATCCCCGGCC GCACGCGCCGCGAGGCCTTCGTCCGGCTGCTGAAGGACCTGGCGGGCGTTGGCGAGCCCCAGGGCAAGACCGAGGCCGAG GCCAAGCCGGCCAAGAAGCCCAGGGCGGACAAGGCCGCGAAGCCCGAGTCGAAAAAGAAGAAGAAGCTGAAGAAGGCGGC CTGA
Upstream 100 bases:
>100_bases CGGAGTAAGGTTCGGGGGACGGGATCGTCCGTCGTCAAACCGTCGCAGAGAGCGGCTAAGTCTTGCCGCCGTCCAAGCCA GTTGGGGGACGGTGACGACC
Downstream 100 bases:
>100_bases AACGGCCGATCCGTCCGGCGGCCGCCTACGCCGACGGGCGGGGCATCACCACGTCCGTGGGCCGCAGGTGCGGCGTGCGC AGGCGTTCATAGCCGGCCTC
Product: transcriptional regulator, MarR family
Products: NA
Alternate protein names: Transcriptional Regulator MarR Family; MarR-Family Transcriptional Regulator; Regulatory Protein MarR; MarR Family Regulatory Helix-Turn-Helix Protein; Regulatory Protein Marr
Number of amino acids: Translated: 187; Mature: 186
Protein sequence:
>187_residues MAKGKARAKAGVAALDGSPSHLLHRALQRALDEYAAEFGAGAITQRQYAVLAAVAAQEGATQTDLVRATGIDRSTLADMA ARMIAKGLLARERSTADARANAVRLTPEGQAALAEAQPKMAAVDGRLLKLIPGRTRREAFVRLLKDLAGVGEPQGKTEAE AKPAKKPRADKAAKPESKKKKKLKKAA
Sequences:
>Translated_187_residues MAKGKARAKAGVAALDGSPSHLLHRALQRALDEYAAEFGAGAITQRQYAVLAAVAAQEGATQTDLVRATGIDRSTLADMA ARMIAKGLLARERSTADARANAVRLTPEGQAALAEAQPKMAAVDGRLLKLIPGRTRREAFVRLLKDLAGVGEPQGKTEAE AKPAKKPRADKAAKPESKKKKKLKKAA >Mature_186_residues AKGKARAKAGVAALDGSPSHLLHRALQRALDEYAAEFGAGAITQRQYAVLAAVAAQEGATQTDLVRATGIDRSTLADMAA RMIAKGLLARERSTADARANAVRLTPEGQAALAEAQPKMAAVDGRLLKLIPGRTRREAFVRLLKDLAGVGEPQGKTEAEA KPAKKPRADKAAKPESKKKKKLKKAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19696; Mature: 19565
Theoretical pI: Translated: 11.12; Mature: 11.12
Prosite motif: PS50995 HTH_MARR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKGKARAKAGVAALDGSPSHLLHRALQRALDEYAAEFGAGAITQRQYAVLAAVAAQEGA CCCCCHHHHHCCHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCC TQTDLVRATGIDRSTLADMAARMIAKGLLARERSTADARANAVRLTPEGQAALAEAQPKM CHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHCCEEEECCCCCHHHHHHCCHH AAVDGRLLKLIPGRTRREAFVRLLKDLAGVGEPQGKTEAEAKPAKKPRADKAAKPESKKK HHHCCHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH KKLKKAA HHHHHCC >Mature Secondary Structure AKGKARAKAGVAALDGSPSHLLHRALQRALDEYAAEFGAGAITQRQYAVLAAVAAQEGA CCCCHHHHHCCHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCC TQTDLVRATGIDRSTLADMAARMIAKGLLARERSTADARANAVRLTPEGQAALAEAQPKM CHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHCCEEEECCCCCHHHHHHCCHH AAVDGRLLKLIPGRTRREAFVRLLKDLAGVGEPQGKTEAEAKPAKKPRADKAAKPESKKK HHHCCHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH KKLKKAA HHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA