| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197103576
Identifier: 197103576
GI number: 197103576
Start: 101473
End: 102276
Strand: Reverse
Name: 197103576
Synonym: PHZ_c0110
Alternate gene names: NA
Gene position: 102276-101473 (Counterclockwise)
Preceding gene: 197103577
Following gene: 197103573
Centisome position: 2.56
GC content: 71.89
Gene sequence:
>804_bases ATGGGGACGGCCGTGAGCGACCTGCAGCGATACGAGACCCGCGACGGCCCGATGCTGGGCTTCGCCAGCGACATCTACGT CGCCCGCTCGCTGGAGCTCTACGGCGAGTACTGCCCGGGCGAGCGTCGCCTCTTCGACCAGCTGGTCAAGCCTGGCCACA CCGTCGTCGAGATCGGCGCCAACATCGGCAGCCACACCGTCGCCCTGGCGCGCGCCTGCGCGCCGGGCCCCCTCTATGCC TTCGAACCGCAGCAGCGGGTGTTCCAGGCGCTCTGCGCCAACCTGGCCCTGAACGGCGTGGCCAACGCGGTCGCCTATCC CGAAGCCTGCGGGGAGGCGCCCGGCTGGGCGGTGGTCCCGCGGCTGGACTACGGCGCCGTGCGGAACCCGGGCGGCGTCG CGCTGCAGCCCGACGGATCCGAGGGCCTGCGGACGCGCATCGTGCGGCTGGACGACCTGGAGCTGCCCGCCTGCCACCTG CTGAAGGTCGACGTCGAGGGCTTCGAGCCCGCCGTCCTGCGCGGCGCCGCCGGCACGATCGCCCGCTGCCGGCCGATCCT CTACGTCGAGAACGACCGCGCCGCGAACCAGCAGGCGGTGATCGACCTGATCCACGGCCAGGGCTACCGGATGTACTGGC ACACGCCGGCGCTGTTCGATCCGCAGAACTTCCGCGGGAACGCCGAGAACGTCTTCCCCGGGACGGTGTCGCTGAACCTC CTGGCCATCCCGAGCGAGCGGCCGAGCAACATCGCCGCCCCGCCCATCGACCCCGCCAACTGGCGCTCGCCCATCAAGGT CTAG
Upstream 100 bases:
>100_bases CGGCGTCCAAGGAAGAGCCCGCCGAGAAGTCGGAAGCCTAAAGGCCCCGACGCACCGAGTTTCCATGCGGCGGCCGGAGC GATCCGGCCGCCGTTCATGT
Downstream 100 bases:
>100_bases AGCGTCGCCGTCAGGGCGCGGCCTGCGGATGCTGCGGCAGGCCATCGTCCAGCTTCAGCCAGGCCACCCGGCTCTCGACC CAGAAGTGGTCGGTCGGCGA
Product: SAM-dependent methyltransferase
Products: NA
Alternate protein names: FkbM Family Methyltransferase; Methyltransferase; Methyltransferase FkbM Family
Number of amino acids: Translated: 267; Mature: 266
Protein sequence:
>267_residues MGTAVSDLQRYETRDGPMLGFASDIYVARSLELYGEYCPGERRLFDQLVKPGHTVVEIGANIGSHTVALARACAPGPLYA FEPQQRVFQALCANLALNGVANAVAYPEACGEAPGWAVVPRLDYGAVRNPGGVALQPDGSEGLRTRIVRLDDLELPACHL LKVDVEGFEPAVLRGAAGTIARCRPILYVENDRAANQQAVIDLIHGQGYRMYWHTPALFDPQNFRGNAENVFPGTVSLNL LAIPSERPSNIAAPPIDPANWRSPIKV
Sequences:
>Translated_267_residues MGTAVSDLQRYETRDGPMLGFASDIYVARSLELYGEYCPGERRLFDQLVKPGHTVVEIGANIGSHTVALARACAPGPLYA FEPQQRVFQALCANLALNGVANAVAYPEACGEAPGWAVVPRLDYGAVRNPGGVALQPDGSEGLRTRIVRLDDLELPACHL LKVDVEGFEPAVLRGAAGTIARCRPILYVENDRAANQQAVIDLIHGQGYRMYWHTPALFDPQNFRGNAENVFPGTVSLNL LAIPSERPSNIAAPPIDPANWRSPIKV >Mature_266_residues GTAVSDLQRYETRDGPMLGFASDIYVARSLELYGEYCPGERRLFDQLVKPGHTVVEIGANIGSHTVALARACAPGPLYAF EPQQRVFQALCANLALNGVANAVAYPEACGEAPGWAVVPRLDYGAVRNPGGVALQPDGSEGLRTRIVRLDDLELPACHLL KVDVEGFEPAVLRGAAGTIARCRPILYVENDRAANQQAVIDLIHGQGYRMYWHTPALFDPQNFRGNAENVFPGTVSLNLL AIPSERPSNIAAPPIDPANWRSPIKV
Specific function: Unknown
COG id: COG0500
COG function: function code QR; SAM-dependent methyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28883; Mature: 28752
Theoretical pI: Translated: 5.66; Mature: 5.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTAVSDLQRYETRDGPMLGFASDIYVARSLELYGEYCPGERRLFDQLVKPGHTVVEIGA CCCHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCEEEEECC NIGSHTVALARACAPGPLYAFEPQQRVFQALCANLALNGVANAVAYPEACGEAPGWAVVP CCCHHHHHHHHHCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCEEEE RLDYGAVRNPGGVALQPDGSEGLRTRIVRLDDLELPACHLLKVDVEGFEPAVLRGAAGTI CCCCCCCCCCCCEEECCCCCCCCEEEEEEECCCCCCCEEEEEEECCCCCHHHHCCCCCCH ARCRPILYVENDRAANQQAVIDLIHGQGYRMYWHTPALFDPQNFRGNAENVFPGTVSLNL HHCCEEEEEECCCCCCHHHEEEEECCCCEEEEECCCCEECCCCCCCCCCCCCCCEEEEEE LAIPSERPSNIAAPPIDPANWRSPIKV EEECCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure GTAVSDLQRYETRDGPMLGFASDIYVARSLELYGEYCPGERRLFDQLVKPGHTVVEIGA CCHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCEEEEECC NIGSHTVALARACAPGPLYAFEPQQRVFQALCANLALNGVANAVAYPEACGEAPGWAVVP CCCHHHHHHHHHCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCEEEE RLDYGAVRNPGGVALQPDGSEGLRTRIVRLDDLELPACHLLKVDVEGFEPAVLRGAAGTI CCCCCCCCCCCCEEECCCCCCCCEEEEEEECCCCCCCEEEEEEECCCCCHHHHCCCCCCH ARCRPILYVENDRAANQQAVIDLIHGQGYRMYWHTPALFDPQNFRGNAENVFPGTVSLNL HHCCEEEEEECCCCCCHHHEEEEECCCCEEEEECCCCEECCCCCCCCCCCCCCCEEEEEE LAIPSERPSNIAAPPIDPANWRSPIKV EEECCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA