| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is pdxK [H]
Identifier: 197103560
GI number: 197103560
Start: 88340
End: 89185
Strand: Direct
Name: pdxK [H]
Synonym: PHZ_c0094
Alternate gene names: 197103560
Gene position: 88340-89185 (Clockwise)
Preceding gene: 197103559
Following gene: 197103561
Centisome position: 2.21
GC content: 75.18
Gene sequence:
>846_bases GTGCCCTTAGCCCTCGTCCTCTCCTCCTTCGTGGCGGCCAGCCGGATCGGCGGCGGGGCCCAGCAGTACGTGCTGGCCGC GCACAGGATCGACCCCGTGCTGGCCCCCACGGTCATGTTCGGCCGCAGCCCGGCCAAGGGCGGCCTCGGCGAAGTGACCG CCCCCGACGTGCTCGCCCGCATGCTTGGCGACATCGAGGCCGACGCGATCTTCGGCCTCGTCGACCTGATCATCACCGGC CATTTCTCCATGCCCGAACAGGTGGACATCGCCGCCGGCGTGCTGGAGAGGGTGCGCGCCGCCGAGCGCGGCCCGGCCTA TTCCCGCCGTCCGGTGGTGGTGGTCGACCCGATCATGGGCGATGCGCCCAAGGGCCTTTATGTGAACCCCGACGTGGCCG ACCGCGTCGCCCGCCGGCTCGTGCCGCTCGCCGACTGGATCACGCCGAACCTCTGGGAGCTGGGCCGGCTGTCCGGGCGC AGCGTCGAGACGGCCGGCGCGGCGCGCGACGCGGCCCGGGCCCTGGGCCGGCCGGCCCTGGTCACCTCGGTCCCCGCCGG CTCGGACGAGATCGGGCTCCTGCTGGTCACGGAGGCCGAGGCGGTGCTGTTCGCCCACCCGCGCCTCGACCGCGCCCCGA ACGGGACCGGCGACCTCGTCGCCGCCAGCTTCGGCGCCGGGCTGGTGGAGGGGATGGCTCCCCTGGCCGCCGCCGAACGC GCGGCCCGCGCCGCCGCCGAGACCGTCCAGGCCACCCTGGAGTGGAAGGCCCCCGAGCTGCCGATCGTGGCCCTAGCCGA CCGGCTCGTGTCTCCGCGGGCAGCGGTGCGCGTGGAGCGCCTCTGA
Upstream 100 bases:
>100_bases CAGGCGGACTACATCGGCGTGACGCCGGAAGGCCCGTTCAAGCCCGAACACTACCGCTACTAGGGCTTTCGGAGCGGCGC GCGGGGGCTATGGTCAGGCT
Downstream 100 bases:
>100_bases ACCGGCCTGAGCTGTCGGCGAGTTGATTTCGGGGCGCGGCGGGGGCATCCCCCGTGGCGTCATGCGTCGCGCCGTCATCC TCAGGATCGAGGGCCGGGTC
Product: pyridoxine kinase
Products: NA
Alternate protein names: PN/PL/PM kinase; Pyridoxal kinase; Pyridoxamine kinase; Vitamin B6 kinase [H]
Number of amino acids: Translated: 281; Mature: 280
Protein sequence:
>281_residues MPLALVLSSFVAASRIGGGAQQYVLAAHRIDPVLAPTVMFGRSPAKGGLGEVTAPDVLARMLGDIEADAIFGLVDLIITG HFSMPEQVDIAAGVLERVRAAERGPAYSRRPVVVVDPIMGDAPKGLYVNPDVADRVARRLVPLADWITPNLWELGRLSGR SVETAGAARDAARALGRPALVTSVPAGSDEIGLLLVTEAEAVLFAHPRLDRAPNGTGDLVAASFGAGLVEGMAPLAAAER AARAAAETVQATLEWKAPELPIVALADRLVSPRAAVRVERL
Sequences:
>Translated_281_residues MPLALVLSSFVAASRIGGGAQQYVLAAHRIDPVLAPTVMFGRSPAKGGLGEVTAPDVLARMLGDIEADAIFGLVDLIITG HFSMPEQVDIAAGVLERVRAAERGPAYSRRPVVVVDPIMGDAPKGLYVNPDVADRVARRLVPLADWITPNLWELGRLSGR SVETAGAARDAARALGRPALVTSVPAGSDEIGLLLVTEAEAVLFAHPRLDRAPNGTGDLVAASFGAGLVEGMAPLAAAER AARAAAETVQATLEWKAPELPIVALADRLVSPRAAVRVERL >Mature_280_residues PLALVLSSFVAASRIGGGAQQYVLAAHRIDPVLAPTVMFGRSPAKGGLGEVTAPDVLARMLGDIEADAIFGLVDLIITGH FSMPEQVDIAAGVLERVRAAERGPAYSRRPVVVVDPIMGDAPKGLYVNPDVADRVARRLVPLADWITPNLWELGRLSGRS VETAGAARDAARALGRPALVTSVPAGSDEIGLLLVTEAEAVLFAHPRLDRAPNGTGDLVAASFGAGLVEGMAPLAAAERA ARAAAETVQATLEWKAPELPIVALADRLVSPRAAVRVERL
Specific function: Phosphorylates B6 vitamers; functions in a salvage pathway. Uses pyridoxal, pyridoxine, and pyridoxamine as substrates [H]
COG id: COG2240
COG function: function code H; Pyridoxal/pyridoxine/pyridoxamine kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pyridoxine kinase family [H]
Homologues:
Organism=Escherichia coli, GI1788758, Length=197, Percent_Identity=31.4720812182741, Blast_Score=87, Evalue=1e-18, Organism=Escherichia coli, GI1787924, Length=256, Percent_Identity=29.6875, Blast_Score=82, Evalue=4e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013749 - InterPro: IPR004625 [H]
Pfam domain/function: PF08543 Phos_pyr_kin [H]
EC number: =2.7.1.35 [H]
Molecular weight: Translated: 29285; Mature: 29154
Theoretical pI: Translated: 5.41; Mature: 5.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLALVLSSFVAASRIGGGAQQYVLAAHRIDPVLAPTVMFGRSPAKGGLGEVTAPDVLAR CCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHH MLGDIEADAIFGLVDLIITGHFSMPEQVDIAAGVLERVRAAERGPAYSRRPVVVVDPIMG HHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCC DAPKGLYVNPDVADRVARRLVPLADWITPNLWELGRLSGRSVETAGAARDAARALGRPAL CCCCCCEECCCHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCHHHHHHHHHHHHCCCCE VTSVPAGSDEIGLLLVTEAEAVLFAHPRLDRAPNGTGDLVAASFGAGLVEGMAPLAAAER EEECCCCCCCEEEEEEECCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH AARAAAETVQATLEWKAPELPIVALADRLVSPRAAVRVERL HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHHEEECC >Mature Secondary Structure PLALVLSSFVAASRIGGGAQQYVLAAHRIDPVLAPTVMFGRSPAKGGLGEVTAPDVLAR CHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHH MLGDIEADAIFGLVDLIITGHFSMPEQVDIAAGVLERVRAAERGPAYSRRPVVVVDPIMG HHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCC DAPKGLYVNPDVADRVARRLVPLADWITPNLWELGRLSGRSVETAGAARDAARALGRPAL CCCCCCEECCCHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCHHHHHHHHHHHHCCCCE VTSVPAGSDEIGLLLVTEAEAVLFAHPRLDRAPNGTGDLVAASFGAGLVEGMAPLAAAER EEECCCCCCCEEEEEEECCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH AARAAAETVQATLEWKAPELPIVALADRLVSPRAAVRVERL HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHHEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA