| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is ahcY [H]
Identifier: 197103559
GI number: 197103559
Start: 86911
End: 88302
Strand: Direct
Name: ahcY [H]
Synonym: PHZ_c0093
Alternate gene names: 197103559
Gene position: 86911-88302 (Clockwise)
Preceding gene: 197103558
Following gene: 197103560
Centisome position: 2.17
GC content: 64.8
Gene sequence:
>1392_bases ATGACCGACTACGTCGTGAAGGACATTTCGCTCGCCGACTGGGGCCGCAAGGAAATCGAGATCGCCGAGACCGAAATGCC GGGCCTCATGGCGGTGCGCGAGGAATTCGCCAAGGCCCAGCCCCTGAAGGGCGCTCGGGTCGCGGGCTCGCTGCACATGA CGATCCAGACCGCGGTCCTGATCGAGACCCTGGAGGCTCTCGGCGCCGAGGTGCGCTGGGCTTCGTGCAACATCTTCTCC ACCCAGGACCACGCCGCCGCCGCCATCGCGGTGAAGGGCACGCCGGTGTTCGCCATCAAGGGCGAGACCCTGATCGAGTA CTGGGAATACGCCCACCGGATCTTCGAATGGGCCGACGGCGGCTACCCGAACATGATCCTGGACGACGGCGGCGACGCGA CCCTGCTGTGCGTCCTCGGGCCCAAGGCCGAAGCCGATCCTTCGATCCTGAACAATCCTCAGAACGAGGAAGAGGAAGCG CTCTACACGGTGATGAAGCGCTACCTGAAGGAGAAGCCGGGCTTCTATTCGGCGATCCGCGCCGCCATCAAGGGCGTGTC GGAAGAGACCACCACGGGCGTCCACCGCCTGTACCAGATGGCCGAGCGGGGCGAGCTGCCGTTCCCGGCGATCAACGTCA ACGACAGCGTGACGAAGTCGAAGTTCGACAACCTCTACGGCTGCCGCGAGAGCCTGGTGGACGCCATCCGCCGCGGCACG GACGTGATGCTGGCCGGCAAGACCGCCGTGGTCATGGGCTACGGCGACGTGGGCAAGGGCTCGGCCGCCTCGCTGCGCAA CGGCGGCGCCCGGGTCATGGTCACCGAGGTCGACCCGATCTGCGCTCTGCAGGCGGCGATGGAAGGCTATGAGGTCGTGA CCGTCGAGGACGTGGCCGACAAGGCCGACATCTTCGTCACCGCCACCGGCAACAAGGACGTCCTCACCGTCGACCACATG CGGCGGATGAAGAACAACGCCATCGTGGCGAACATCGGCCACTTCGATTCCGAGATCCAGATCGCCGGCCTGCGCAACTT CAAGTGGGACAAGATCAAGGATCAGGTCCACCACGTGGAGTTCCCGGACGGCAAGAAGATCATCGTGCTGTCGGAAGGCC GCCTGGTGAACCTCGGCAACGCCACGGGCCACCCCAGCTTCGTCATGTCGGCCTCGTTCACCAACCAGACGCTGGCCCAG ATCGAGCTGTGGCAGAACGGCGCGAAGTACGAGAAGCGCGTCTACACCCTGCCCAAGCACCTCGACGAGAAGGTGGCCAT GCTGCACCTCGAGAAGCTCGGCGCGAAGCTGACCAAGCTCTCCAAGGAACAGGCGGACTACATCGGCGTGACGCCGGAAG GCCCGTTCAAGCCCGAACACTACCGCTACTAG
Upstream 100 bases:
>100_bases CCTGAGCCCGGGACATAAAGACTTCTTTATATGATTGTTGCGGCTGGCCGCCCCGGCGGCTATAGAGCGCGCAACCGAAC TTCCCCCTTTTGAGGACGCC
Downstream 100 bases:
>100_bases GGCTTTCGGAGCGGCGCGCGGGGGCTATGGTCAGGCTGTGCCCTTAGCCCTCGTCCTCTCCTCCTTCGTGGCGGCCAGCC GGATCGGCGGCGGGGCCCAG
Product: S-adenosyl-L-homocysteine hydrolase
Products: NA
Alternate protein names: S-adenosyl-L-homocysteine hydrolase; AdoHcyase [H]
Number of amino acids: Translated: 463; Mature: 462
Protein sequence:
>463_residues MTDYVVKDISLADWGRKEIEIAETEMPGLMAVREEFAKAQPLKGARVAGSLHMTIQTAVLIETLEALGAEVRWASCNIFS TQDHAAAAIAVKGTPVFAIKGETLIEYWEYAHRIFEWADGGYPNMILDDGGDATLLCVLGPKAEADPSILNNPQNEEEEA LYTVMKRYLKEKPGFYSAIRAAIKGVSEETTTGVHRLYQMAERGELPFPAINVNDSVTKSKFDNLYGCRESLVDAIRRGT DVMLAGKTAVVMGYGDVGKGSAASLRNGGARVMVTEVDPICALQAAMEGYEVVTVEDVADKADIFVTATGNKDVLTVDHM RRMKNNAIVANIGHFDSEIQIAGLRNFKWDKIKDQVHHVEFPDGKKIIVLSEGRLVNLGNATGHPSFVMSASFTNQTLAQ IELWQNGAKYEKRVYTLPKHLDEKVAMLHLEKLGAKLTKLSKEQADYIGVTPEGPFKPEHYRY
Sequences:
>Translated_463_residues MTDYVVKDISLADWGRKEIEIAETEMPGLMAVREEFAKAQPLKGARVAGSLHMTIQTAVLIETLEALGAEVRWASCNIFS TQDHAAAAIAVKGTPVFAIKGETLIEYWEYAHRIFEWADGGYPNMILDDGGDATLLCVLGPKAEADPSILNNPQNEEEEA LYTVMKRYLKEKPGFYSAIRAAIKGVSEETTTGVHRLYQMAERGELPFPAINVNDSVTKSKFDNLYGCRESLVDAIRRGT DVMLAGKTAVVMGYGDVGKGSAASLRNGGARVMVTEVDPICALQAAMEGYEVVTVEDVADKADIFVTATGNKDVLTVDHM RRMKNNAIVANIGHFDSEIQIAGLRNFKWDKIKDQVHHVEFPDGKKIIVLSEGRLVNLGNATGHPSFVMSASFTNQTLAQ IELWQNGAKYEKRVYTLPKHLDEKVAMLHLEKLGAKLTKLSKEQADYIGVTPEGPFKPEHYRY >Mature_462_residues TDYVVKDISLADWGRKEIEIAETEMPGLMAVREEFAKAQPLKGARVAGSLHMTIQTAVLIETLEALGAEVRWASCNIFST QDHAAAAIAVKGTPVFAIKGETLIEYWEYAHRIFEWADGGYPNMILDDGGDATLLCVLGPKAEADPSILNNPQNEEEEAL YTVMKRYLKEKPGFYSAIRAAIKGVSEETTTGVHRLYQMAERGELPFPAINVNDSVTKSKFDNLYGCRESLVDAIRRGTD VMLAGKTAVVMGYGDVGKGSAASLRNGGARVMVTEVDPICALQAAMEGYEVVTVEDVADKADIFVTATGNKDVLTVDHMR RMKNNAIVANIGHFDSEIQIAGLRNFKWDKIKDQVHHVEFPDGKKIIVLSEGRLVNLGNATGHPSFVMSASFTNQTLAQI ELWQNGAKYEKRVYTLPKHLDEKVAMLHLEKLGAKLTKLSKEQADYIGVTPEGPFKPEHYRY
Specific function: May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine [H]
COG id: COG0499
COG function: function code H; S-adenosylhomocysteine hydrolase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the adenosylhomocysteinase family [H]
Homologues:
Organism=Homo sapiens, GI9951915, Length=462, Percent_Identity=57.5757575757576, Blast_Score=498, Evalue=1e-141, Organism=Homo sapiens, GI239937451, Length=440, Percent_Identity=57.2727272727273, Blast_Score=471, Evalue=1e-133, Organism=Homo sapiens, GI298286489, Length=465, Percent_Identity=49.247311827957, Blast_Score=454, Evalue=1e-128, Organism=Homo sapiens, GI195539349, Length=465, Percent_Identity=49.247311827957, Blast_Score=453, Evalue=1e-127, Organism=Homo sapiens, GI195539337, Length=465, Percent_Identity=49.247311827957, Blast_Score=453, Evalue=1e-127, Organism=Homo sapiens, GI24308043, Length=465, Percent_Identity=49.247311827957, Blast_Score=453, Evalue=1e-127, Organism=Homo sapiens, GI21361647, Length=465, Percent_Identity=47.9569892473118, Blast_Score=430, Evalue=1e-120, Organism=Caenorhabditis elegans, GI17506425, Length=465, Percent_Identity=59.7849462365591, Blast_Score=521, Evalue=1e-148, Organism=Saccharomyces cerevisiae, GI6320882, Length=478, Percent_Identity=56.9037656903766, Blast_Score=494, Evalue=1e-140, Organism=Drosophila melanogaster, GI24642172, Length=462, Percent_Identity=58.8744588744589, Blast_Score=509, Evalue=1e-144, Organism=Drosophila melanogaster, GI24656245, Length=466, Percent_Identity=48.9270386266094, Blast_Score=444, Evalue=1e-125, Organism=Drosophila melanogaster, GI45553387, Length=464, Percent_Identity=50, Blast_Score=442, Evalue=1e-124, Organism=Drosophila melanogaster, GI45553385, Length=463, Percent_Identity=49.8920086393089, Blast_Score=439, Evalue=1e-123,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000043 - InterPro: IPR015878 - InterPro: IPR020082 [H]
Pfam domain/function: PF05221 AdoHcyase; PF00670 AdoHcyase_NAD [H]
EC number: =3.3.1.1 [H]
Molecular weight: Translated: 51058; Mature: 50927
Theoretical pI: Translated: 5.65; Mature: 5.65
Prosite motif: PS00738 ADOHCYASE_1 ; PS00739 ADOHCYASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDYVVKDISLADWGRKEIEIAETEMPGLMAVREEFAKAQPLKGARVAGSLHMTIQTAVL CCCCEEECCCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCCEEECEEEEHHHHHHH IETLEALGAEVRWASCNIFSTQDHAAAAIAVKGTPVFAIKGETLIEYWEYAHRIFEWADG HHHHHHCCCCEEEEEEEEECCCCCCEEEEEEECCEEEEECCHHHHHHHHHHHHHHHHCCC GYPNMILDDGGDATLLCVLGPKAEADPSILNNPQNEEEEALYTVMKRYLKEKPGFYSAIR CCCCEEEECCCCEEEEEEECCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHH AAIKGVSEETTTGVHRLYQMAERGELPFPAINVNDSVTKSKFDNLYGCRESLVDAIRRGT HHHHCCCCHHHHHHHHHHHHHHCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHCCC DVMLAGKTAVVMGYGDVGKGSAASLRNGGARVMVTEVDPICALQAAMEGYEVVTVEDVAD EEEEECCEEEEEECCCCCCCCHHHHCCCCCEEEEEECCHHHHHHHHHCCCEEEEEECCCC KADIFVTATGNKDVLTVDHMRRMKNNAIVANIGHFDSEIQIAGLRNFKWDKIKDQVHHVE CCCEEEEECCCCCEEEHHHHHHHCCCEEEEEECCCCCEEEEEECCCCCHHHHHHHHHEEE FPDGKKIIVLSEGRLVNLGNATGHPSFVMSASFTNQTLAQIELWQNGAKYEKRVYTLPKH CCCCCEEEEEECCCEEECCCCCCCCCEEEEECCCCCHHHHHHHHCCCCCHHHHHHHCHHH LDEKVAMLHLEKLGAKLTKLSKEQADYIGVTPEGPFKPEHYRY HHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCC >Mature Secondary Structure TDYVVKDISLADWGRKEIEIAETEMPGLMAVREEFAKAQPLKGARVAGSLHMTIQTAVL CCCEEECCCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCCEEECEEEEHHHHHHH IETLEALGAEVRWASCNIFSTQDHAAAAIAVKGTPVFAIKGETLIEYWEYAHRIFEWADG HHHHHHCCCCEEEEEEEEECCCCCCEEEEEEECCEEEEECCHHHHHHHHHHHHHHHHCCC GYPNMILDDGGDATLLCVLGPKAEADPSILNNPQNEEEEALYTVMKRYLKEKPGFYSAIR CCCCEEEECCCCEEEEEEECCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHH AAIKGVSEETTTGVHRLYQMAERGELPFPAINVNDSVTKSKFDNLYGCRESLVDAIRRGT HHHHCCCCHHHHHHHHHHHHHHCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHCCC DVMLAGKTAVVMGYGDVGKGSAASLRNGGARVMVTEVDPICALQAAMEGYEVVTVEDVAD EEEEECCEEEEEECCCCCCCCHHHHCCCCCEEEEEECCHHHHHHHHHCCCEEEEEECCCC KADIFVTATGNKDVLTVDHMRRMKNNAIVANIGHFDSEIQIAGLRNFKWDKIKDQVHHVE CCCEEEEECCCCCEEEHHHHHHHCCCEEEEEECCCCCEEEEEECCCCCHHHHHHHHHEEE FPDGKKIIVLSEGRLVNLGNATGHPSFVMSASFTNQTLAQIELWQNGAKYEKRVYTLPKH CCCCCEEEEEECCCEEECCCCCCCCCEEEEECCCCCHHHHHHHHCCCCCHHHHHHHCHHH LDEKVAMLHLEKLGAKLTKLSKEQADYIGVTPEGPFKPEHYRY HHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11259647 [H]