| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
Click here to switch to the map view.
The map label for this gene is lpxK [C]
Identifier: 197103487
GI number: 197103487
Start: 17839
End: 18045
Strand: Direct
Name: lpxK [C]
Synonym: PHZ_c0021
Alternate gene names: 197103487
Gene position: 17839-18045 (Clockwise)
Preceding gene: 197103486
Following gene: 197103489
Centisome position: 0.45
GC content: 71.01
Gene sequence:
>207_bases ATGGAAGACGCCCTGCCCGCCCTCGATGTCGACGTCGATCCGCGCCTGCTGGAGATCCTGGTCTGTCCGCTGACCCGCGG GCCCCTGGAGTACGACCGGGAGAAGGCCGAGCTGGTCAGCCGCTCGGCCCGGCTCGCCTATCCGATCCGCGACGGCGTGC CGATCATGCTGCCCGAGGAAGCCCGCGAGCTGGGCGAGGGCGAGTAG
Upstream 100 bases:
>100_bases CGAGGGGCTGATGGGCCGGTTCGAGACCCTGATCGCCCTGCTGGAGATCGACGCCTCCGAGCCGGATGACGACACCCAGT CGGTGCAGTAGAGGGAAGGC
Downstream 100 bases:
>100_bases CTACAGCGCCTCGCCGCGCAGCAGGCGGGGCAGGTCGCCGACCGCGCCGCCGGCCTCGTGCATGAAGAACCGCCGGGCCG GACCCACCCGGTTCACCGCG
Product: tetraacyldisaccharide-1-P 4-kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 68; Mature: 68
Protein sequence:
>68_residues MEDALPALDVDVDPRLLEILVCPLTRGPLEYDREKAELVSRSARLAYPIRDGVPIMLPEEARELGEGE
Sequences:
>Translated_68_residues MEDALPALDVDVDPRLLEILVCPLTRGPLEYDREKAELVSRSARLAYPIRDGVPIMLPEEARELGEGE >Mature_68_residues MEDALPALDVDVDPRLLEILVCPLTRGPLEYDREKAELVSRSARLAYPIRDGVPIMLPEEARELGEGE
Specific function: Unknown
COG id: COG2835
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0434 family [H]
Homologues:
Organism=Escherichia coli, GI1787146, Length=57, Percent_Identity=49.1228070175439, Blast_Score=64, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005651 [H]
Pfam domain/function: PF03966 Trm112p [H]
EC number: NA
Molecular weight: Translated: 7603; Mature: 7603
Theoretical pI: Translated: 4.05; Mature: 4.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEDALPALDVDVDPRLLEILVCPLTRGPLEYDREKAELVSRSARLAYPIRDGVPIMLPEE CCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEECHH ARELGEGE HHHCCCCC >Mature Secondary Structure MEDALPALDVDVDPRLLEILVCPLTRGPLEYDREKAELVSRSARLAYPIRDGVPIMLPEE CCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEECHH ARELGEGE HHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA