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The map label for this gene is yidA [C]

Identifier: 195978423

GI number: 195978423

Start: 1353382

End: 1354191

Strand: Direct

Name: yidA [C]

Synonym: Sez_1318

Alternate gene names: 195978423

Gene position: 1353382-1354191 (Clockwise)

Preceding gene: 195978421

Following gene: 195978424

Centisome position: 66.86

GC content: 45.68

Gene sequence:

>810_bases
ATGTCTATCAAACTTGTTGCCATTGATATTGATGGCACCTTACTCACTGACGATCGACGCGTTACTAATGACGTTTTTGA
TGCCATACAGGAGGCCAAGGCCCAAGGCGTCCATATCGTCATTGCTACGGGACGCCCCATTGCTGGGGTCATCTCATTAT
TAGAGCAATTGCAATTAAATCAAAAGGGAGATCATGTCATCACCTTCAATGGCGGACTGATTCAAGACACTGCGACCGGT
GAAGAGGTGGTCAAAGAGCTGATGACCTACGATGATTACCTTGACATAGAATATTTAAGCCGCAGGCTAGGCGTTCACAT
GCATGCCATCACAACAGAGGGCATCTATACTGCTAACCGGAATATCGGTAAATACACTGTACGAGAAGCAAGGCTTGTGG
ACATGCCTGTTTTTTATCGCACGCCTGAGGAGATGGCGGACAAAGAGATCATCAAAATGATGATGATTGATGAGCCAGAC
CTTTTAGATGAGGCCATCAAACAGATTCCTCAAGCCTTCTATGACACCTACAATATTGTCAAATCAACACCTTTTTATCT
CGAATTAACACCAAAGACTGTCAGCAAGGGCACTGCTATTAGTCACCTTGCCAAAAAGCTTGGCATTGACATGTCCCAAA
CGATGGCAATCGGCGATGCTGAAAACGATCGAGCCATGCTTGAAGCGGTTGCTAACCCTGTTGTCATGGAAAATGGGGCT
CCCGAGCTGAAAAAGCTGGCCAAATACATCACCAAATCAAACAATGACAGCGGCGTAGCGCATGCTATTCGGAAGTGGGT
ATTAAACTAA

Upstream 100 bases:

>100_bases
CCAAAATCTCTTTTGTTTTCATGACAAAAGGAACCTATTTTTAGTAAGATAGAAGGTGGCAAATCATTGATTACCAATCA
GAACAACCAAGGAGAATTCC

Downstream 100 bases:

>100_bases
TGTATACATATAAAATCGGAATTTCAGCTAAAGAGCACGATCAGTTTGTCCTATCACATCCTCAGGTCAATCTGCTGCAA
AGCGCTCATTGGGCTCAGGT

Product: hydrolase HAD family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 269; Mature: 268

Protein sequence:

>269_residues
MSIKLVAIDIDGTLLTDDRRVTNDVFDAIQEAKAQGVHIVIATGRPIAGVISLLEQLQLNQKGDHVITFNGGLIQDTATG
EEVVKELMTYDDYLDIEYLSRRLGVHMHAITTEGIYTANRNIGKYTVREARLVDMPVFYRTPEEMADKEIIKMMMIDEPD
LLDEAIKQIPQAFYDTYNIVKSTPFYLELTPKTVSKGTAISHLAKKLGIDMSQTMAIGDAENDRAMLEAVANPVVMENGA
PELKKLAKYITKSNNDSGVAHAIRKWVLN

Sequences:

>Translated_269_residues
MSIKLVAIDIDGTLLTDDRRVTNDVFDAIQEAKAQGVHIVIATGRPIAGVISLLEQLQLNQKGDHVITFNGGLIQDTATG
EEVVKELMTYDDYLDIEYLSRRLGVHMHAITTEGIYTANRNIGKYTVREARLVDMPVFYRTPEEMADKEIIKMMMIDEPD
LLDEAIKQIPQAFYDTYNIVKSTPFYLELTPKTVSKGTAISHLAKKLGIDMSQTMAIGDAENDRAMLEAVANPVVMENGA
PELKKLAKYITKSNNDSGVAHAIRKWVLN
>Mature_268_residues
SIKLVAIDIDGTLLTDDRRVTNDVFDAIQEAKAQGVHIVIATGRPIAGVISLLEQLQLNQKGDHVITFNGGLIQDTATGE
EVVKELMTYDDYLDIEYLSRRLGVHMHAITTEGIYTANRNIGKYTVREARLVDMPVFYRTPEEMADKEIIKMMMIDEPDL
LDEAIKQIPQAFYDTYNIVKSTPFYLELTPKTVSKGTAISHLAKKLGIDMSQTMAIGDAENDRAMLEAVANPVVMENGAP
ELKKLAKYITKSNNDSGVAHAIRKWVLN

Specific function: Catalyzes the dephosphorylation of the artificial chromogenic substrate p-nitrophenyl phosphate (pNPP) and of the natural substrates erythrose 4-phosphate and mannose 1-phosphate [H]

COG id: COG0561

COG function: function code R; Predicted hydrolases of the HAD superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. Cof family [H]

Homologues:

Organism=Escherichia coli, GI2367265, Length=270, Percent_Identity=47.037037037037, Blast_Score=256, Evalue=1e-69,
Organism=Escherichia coli, GI87081790, Length=275, Percent_Identity=29.0909090909091, Blast_Score=85, Evalue=6e-18,
Organism=Escherichia coli, GI87081741, Length=271, Percent_Identity=23.6162361623616, Blast_Score=79, Evalue=4e-16,
Organism=Escherichia coli, GI1787043, Length=273, Percent_Identity=26.007326007326, Blast_Score=70, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023214
- InterPro:   IPR013200
- InterPro:   IPR006379
- InterPro:   IPR000150 [H]

Pfam domain/function: PF08282 Hydrolase_3 [H]

EC number: NA

Molecular weight: Translated: 29971; Mature: 29840

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: PS01228 COF_1 ; PS01229 COF_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIKLVAIDIDGTLLTDDRRVTNDVFDAIQEAKAQGVHIVIATGRPIAGVISLLEQLQLN
CCEEEEEEECCCEEEECCCHHHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHCC
QKGDHVITFNGGLIQDTATGEEVVKELMTYDDYLDIEYLSRRLGVHMHAITTEGIYTANR
CCCCEEEEECCCEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHCEEEEEEEECCEEECCC
NIGKYTVREARLVDMPVFYRTPEEMADKEIIKMMMIDEPDLLDEAIKQIPQAFYDTYNIV
CCCCEEHHHHEEECCCCEECCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
KSTPFYLELTPKTVSKGTAISHLAKKLGIDMSQTMAIGDAENDRAMLEAVANPVVMENGA
HCCCEEEEECCCHHCCCHHHHHHHHHHCCCHHHHEEECCCCCHHHHHHHHCCCEEECCCC
PELKKLAKYITKSNNDSGVAHAIRKWVLN
HHHHHHHHHHHCCCCCCHHHHHHHHHHCC
>Mature Secondary Structure 
SIKLVAIDIDGTLLTDDRRVTNDVFDAIQEAKAQGVHIVIATGRPIAGVISLLEQLQLN
CEEEEEEECCCEEEECCCHHHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHCC
QKGDHVITFNGGLIQDTATGEEVVKELMTYDDYLDIEYLSRRLGVHMHAITTEGIYTANR
CCCCEEEEECCCEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHCEEEEEEEECCEEECCC
NIGKYTVREARLVDMPVFYRTPEEMADKEIIKMMMIDEPDLLDEAIKQIPQAFYDTYNIV
CCCCEEHHHHEEECCCCEECCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
KSTPFYLELTPKTVSKGTAISHLAKKLGIDMSQTMAIGDAENDRAMLEAVANPVVMENGA
HCCCEEEEECCCHHCCCHHHHHHHHHHCCCHHHHEEECCCCCHHHHHHHHCCCEEECCCC
PELKKLAKYITKSNNDSGVAHAIRKWVLN
HHHHHHHHHHHCCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA