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The map label for this gene is yxkH [H]

Identifier: 195978189

GI number: 195978189

Start: 1101514

End: 1102434

Strand: Direct

Name: yxkH [H]

Synonym: Sez_1068

Alternate gene names: 195978189

Gene position: 1101514-1102434 (Clockwise)

Preceding gene: 195978172

Following gene: 195978192

Centisome position: 54.42

GC content: 43.0

Gene sequence:

>921_bases
ATGATTAATCTCATGCTACTACTCGCCTGTATCATAGGCTTATCAGCTATTGTCTACCTTTACAAGAGCCATTCAAAGAT
AAGCATCTCTCAATTATCGCAGGCAATCCCAAAAATAAGCCTATTTTCAAAAACTGATAAAAAGCCAGCTCCCAAGCCCA
GCAAAAAAGCAAATAATAAGAAAGCTAGCCATACAGATAGTCAGCAGCAAAAAGGAGCTGTCAGCTGGACCAAGCAGCAA
GCCCCTGTTAAGCTTCCTATTTTAATGTATCATGCTATTCACGTTATGGCACCAGAAGAGGCAGCAAGTGCTAATCTCAT
CGTTGCTCCAGATCTTTTTGAAAGCCAGCTAAAGGCAATGAAGGAGGCCGGCTACTACTTTTTATCTCCTGAAGAAGCTT
ACCGAGTCTTATCAGCTAACGAACTTCCTGCTGAAAAGGTTGTCTGGCTAACCTTTGATGATAGCATGGTTGATTTTTAC
AACGTTGCCTTTCCAATCCTGAAAAAGCATGGCATCAAGGCCACCAATAACGTCATCACTGGCTTTACAGAGGCAGGCAA
TGCGGCCAATCTTACATTAGACCAGATGAAGGAAATGAAGCAGGCAGGCATGTCTTTCCAAGATCATACGGTTAACCACC
CTGATCTATCTCAGGCAAGCGCTGCTAGTCAAACCGCTGAAATGAAGGATTCTAAAGACTATTTAGACAGAGAGCTTCAC
CAAGATACGATTGCCATTGCTTATCCGGCAGGCCGCTATACTGATACCACATTAAAGATTGCTGAGGACCTGCATTACAA
GTTAGGGGTCACAACAAATGAAGGACTAGCAAGTGCCGCCAATGGCCTGCTATCGCTTAATCGTATTCGAATACTACCAA
CTACAACAGCTGACATTCTAATGAACACGATAAGTCAATAA

Upstream 100 bases:

>100_bases
ACAGCTTGCTTAAAAAAATGTTACAATAGACTAATAAATAAACAAGGAGCAAGTGATGAACAACAGAAACAAACGGCGTA
AAAAAAGAAAAATTTTCAAA

Downstream 100 bases:

>100_bases
CCTGTTAGTTATTAGCCTAGATGAGAAATTGGCTCAACTGCAGGCATTATATTAGCTAGCAGTCCCATACCACTGATTAA
AAGGCATTCTATCTATTCTT

Product: polysaccharide deacetylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 306; Mature: 306

Protein sequence:

>306_residues
MINLMLLLACIIGLSAIVYLYKSHSKISISQLSQAIPKISLFSKTDKKPAPKPSKKANNKKASHTDSQQQKGAVSWTKQQ
APVKLPILMYHAIHVMAPEEAASANLIVAPDLFESQLKAMKEAGYYFLSPEEAYRVLSANELPAEKVVWLTFDDSMVDFY
NVAFPILKKHGIKATNNVITGFTEAGNAANLTLDQMKEMKQAGMSFQDHTVNHPDLSQASAASQTAEMKDSKDYLDRELH
QDTIAIAYPAGRYTDTTLKIAEDLHYKLGVTTNEGLASAANGLLSLNRIRILPTTTADILMNTISQ

Sequences:

>Translated_306_residues
MINLMLLLACIIGLSAIVYLYKSHSKISISQLSQAIPKISLFSKTDKKPAPKPSKKANNKKASHTDSQQQKGAVSWTKQQ
APVKLPILMYHAIHVMAPEEAASANLIVAPDLFESQLKAMKEAGYYFLSPEEAYRVLSANELPAEKVVWLTFDDSMVDFY
NVAFPILKKHGIKATNNVITGFTEAGNAANLTLDQMKEMKQAGMSFQDHTVNHPDLSQASAASQTAEMKDSKDYLDRELH
QDTIAIAYPAGRYTDTTLKIAEDLHYKLGVTTNEGLASAANGLLSLNRIRILPTTTADILMNTISQ
>Mature_306_residues
MINLMLLLACIIGLSAIVYLYKSHSKISISQLSQAIPKISLFSKTDKKPAPKPSKKANNKKASHTDSQQQKGAVSWTKQQ
APVKLPILMYHAIHVMAPEEAASANLIVAPDLFESQLKAMKEAGYYFLSPEEAYRVLSANELPAEKVVWLTFDDSMVDFY
NVAFPILKKHGIKATNNVITGFTEAGNAANLTLDQMKEMKQAGMSFQDHTVNHPDLSQASAASQTAEMKDSKDYLDRELH
QDTIAIAYPAGRYTDTTLKIAEDLHYKLGVTTNEGLASAANGLLSLNRIRILPTTTADILMNTISQ

Specific function: Unknown

COG id: COG0726

COG function: function code G; Predicted xylanase/chitin deacetylase

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide deacetylase family [H]

Homologues:

Organism=Escherichia coli, GI1786322, Length=240, Percent_Identity=27.0833333333333, Blast_Score=69, Evalue=5e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011330
- InterPro:   IPR002509 [H]

Pfam domain/function: PF01522 Polysacc_deac_1 [H]

EC number: NA

Molecular weight: Translated: 33642; Mature: 33642

Theoretical pI: Translated: 8.38; Mature: 8.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINLMLLLACIIGLSAIVYLYKSHSKISISQLSQAIPKISLFSKTDKKPAPKPSKKANNK
CHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCC
KASHTDSQQQKGAVSWTKQQAPVKLPILMYHAIHVMAPEEAASANLIVAPDLFESQLKAM
CCCCCCCHHHCCCCCCCCCCCCEECHHHHHHHHHHCCCCHHCCCCEEECCHHHHHHHHHH
KEAGYYFLSPEEAYRVLSANELPAEKVVWLTFDDSMVDFYNVAFPILKKHGIKATNNVIT
HHCCCEEECHHHHHHHHCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCEEE
GFTEAGNAANLTLDQMKEMKQAGMSFQDHTVNHPDLSQASAASQTAEMKDSKDYLDRELH
CCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHC
QDTIAIAYPAGRYTDTTLKIAEDLHYKLGVTTNEGLASAANGLLSLNRIRILPTTTADIL
CCEEEEEECCCCCCCHHHHHHHHHHEEECCCCCCCHHHHHHHHEEECEEEEEECCHHHHH
MNTISQ
HHHHCC
>Mature Secondary Structure
MINLMLLLACIIGLSAIVYLYKSHSKISISQLSQAIPKISLFSKTDKKPAPKPSKKANNK
CHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCC
KASHTDSQQQKGAVSWTKQQAPVKLPILMYHAIHVMAPEEAASANLIVAPDLFESQLKAM
CCCCCCCHHHCCCCCCCCCCCCEECHHHHHHHHHHCCCCHHCCCCEEECCHHHHHHHHHH
KEAGYYFLSPEEAYRVLSANELPAEKVVWLTFDDSMVDFYNVAFPILKKHGIKATNNVIT
HHCCCEEECHHHHHHHHCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCEEE
GFTEAGNAANLTLDQMKEMKQAGMSFQDHTVNHPDLSQASAASQTAEMKDSKDYLDRELH
CCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHC
QDTIAIAYPAGRYTDTTLKIAEDLHYKLGVTTNEGLASAANGLLSLNRIRILPTTTADIL
CCEEEEEECCCCCCCHHHHHHHHHHEEECCCCCCCHHHHHHHHEEECEEEEEECCHHHHH
MNTISQ
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969509; 9384377 [H]