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The map label for this gene is yvdE [H]

Identifier: 195978172

GI number: 195978172

Start: 1085075

End: 1085782

Strand: Direct

Name: yvdE [H]

Synonym: Sez_1051

Alternate gene names: 195978172

Gene position: 1085075-1085782 (Clockwise)

Preceding gene: 195978171

Following gene: 195978189

Centisome position: 53.61

GC content: 45.34

Gene sequence:

>708_bases
ATGGAGAAGGTCGTGTCTAAAACAATTATTGGGATAACTGCTAACCAAAGGGTGACCAAGGCTCTAGATAACCTGCCTTG
CTCCTATGCTCCAACAGGCTTCATCGAGGCTGTGACAAGATCTGGTGGCCTACCCTTACTTCTTCCGATTGGGGATGAGG
CGGCTGCCAAATCCTATGTCGCAATGGTTGATAAAATCATTCTTATTGGTGGTCAGCATGTTGATCCTAAATATTATCAT
GAAAAAAGGGCTGCGCTTGATGGCGACTTTTCACCCCAGCGTGACACCTTTGAGCTAGCCATCATTAAAGAAGCCCTAGC
GCAGAAAAAACTGATTTTAGGCATTTGCCGCGGTATGCAGTTAATGAATGTTGCTCTAGGTGGCAGTCTAAACCAGCACA
TTGATGGCCATTGGCAAAAGACTGCCTCTGACTGTTTATCACAGGAGATAGTGATCGAAAAGACTTCACCTTTATACCCT
ATCTATGGTTCAAGAGCATTGATTAATTCATTTCACCACCAGAGCCTAAAGCGAGTCGCAAAGGACTTAAGAGTGATTGC
AAGGGATCCTAACGATGGCACTATCGAGGCTGTTGTCTCCTGCAATCCTGACATTCCCTTTCTTGGTGTCCAGTGGCACC
CAGAGCTGCTTCAGGCTATTAGAGAAGAAGACCTAAAGCTTTTTGATTGGTTTATCCATAGCCTCTAG

Upstream 100 bases:

>100_bases
TTCACTTACAGGTTCCAAAAGGTGTGATCGTCCAATCTGTTGATTTGACCAGCGAGTTGCAAACCTTGCTATACTTTATG
AACCAAAATCATCTTGATTA

Downstream 100 bases:

>100_bases
CTCAAAATAAATCTGATTTTTCTCGGAAGCTATAATAGCCATGCTTACTAACGATGATGTGATCTAGGCAGATAAGTCCT
AGATAATCACATGATCGTTT

Product: glutamine amidotransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 235; Mature: 235

Protein sequence:

>235_residues
MEKVVSKTIIGITANQRVTKALDNLPCSYAPTGFIEAVTRSGGLPLLLPIGDEAAAKSYVAMVDKIILIGGQHVDPKYYH
EKRAALDGDFSPQRDTFELAIIKEALAQKKLILGICRGMQLMNVALGGSLNQHIDGHWQKTASDCLSQEIVIEKTSPLYP
IYGSRALINSFHHQSLKRVAKDLRVIARDPNDGTIEAVVSCNPDIPFLGVQWHPELLQAIREEDLKLFDWFIHSL

Sequences:

>Translated_235_residues
MEKVVSKTIIGITANQRVTKALDNLPCSYAPTGFIEAVTRSGGLPLLLPIGDEAAAKSYVAMVDKIILIGGQHVDPKYYH
EKRAALDGDFSPQRDTFELAIIKEALAQKKLILGICRGMQLMNVALGGSLNQHIDGHWQKTASDCLSQEIVIEKTSPLYP
IYGSRALINSFHHQSLKRVAKDLRVIARDPNDGTIEAVVSCNPDIPFLGVQWHPELLQAIREEDLKLFDWFIHSL
>Mature_235_residues
MEKVVSKTIIGITANQRVTKALDNLPCSYAPTGFIEAVTRSGGLPLLLPIGDEAAAKSYVAMVDKIILIGGQHVDPKYYH
EKRAALDGDFSPQRDTFELAIIKEALAQKKLILGICRGMQLMNVALGGSLNQHIDGHWQKTASDCLSQEIVIEKTSPLYP
IYGSRALINSFHHQSLKRVAKDLRVIARDPNDGTIEAVVSCNPDIPFLGVQWHPELLQAIREEDLKLFDWFIHSL

Specific function: Unknown

COG id: COG2071

COG function: function code R; Predicted glutamine amidotransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI87081871, Length=252, Percent_Identity=33.7301587301587, Blast_Score=94, Evalue=8e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017926
- InterPro:   IPR011697 [H]

Pfam domain/function: PF07722 Peptidase_C26 [H]

EC number: NA

Molecular weight: Translated: 26037; Mature: 26037

Theoretical pI: Translated: 6.95; Mature: 6.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKVVSKTIIGITANQRVTKALDNLPCSYAPTGFIEAVTRSGGLPLLLPIGDEAAAKSYV
CCHHHHHHHEEEECCHHHHHHHHCCCCCCCCHHHHHHHHCCCCCEEEEECCCHHHHHHHH
AMVDKIILIGGQHVDPKYYHEKRAALDGDFSPQRDTFELAIIKEALAQKKLILGICRGMQ
HHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LMNVALGGSLNQHIDGHWQKTASDCLSQEIVIEKTSPLYPIYGSRALINSFHHQSLKRVA
HHHHHHCCCCCCCCCCHHHHHHHHHHHHCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHH
KDLRVIARDPNDGTIEAVVSCNPDIPFLGVQWHPELLQAIREEDLKLFDWFIHSL
HHHHEECCCCCCCEEEEEEECCCCCCEEECEECHHHHHHHHHCCHHHHHHHHHCC
>Mature Secondary Structure
MEKVVSKTIIGITANQRVTKALDNLPCSYAPTGFIEAVTRSGGLPLLLPIGDEAAAKSYV
CCHHHHHHHEEEECCHHHHHHHHCCCCCCCCHHHHHHHHCCCCCEEEEECCCHHHHHHHH
AMVDKIILIGGQHVDPKYYHEKRAALDGDFSPQRDTFELAIIKEALAQKKLILGICRGMQ
HHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LMNVALGGSLNQHIDGHWQKTASDCLSQEIVIEKTSPLYPIYGSRALINSFHHQSLKRVA
HHHHHHCCCCCCCCCCHHHHHHHHHHHHCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHH
KDLRVIARDPNDGTIEAVVSCNPDIPFLGVQWHPELLQAIREEDLKLFDWFIHSL
HHHHEECCCCCCCEEEEEEECCCCCCEEECEECHHHHHHHHHCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11337471 [H]