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The map label for this gene is 195978029

Identifier: 195978029

GI number: 195978029

Start: 945743

End: 946339

Strand: Direct

Name: 195978029

Synonym: Sez_0902

Alternate gene names: NA

Gene position: 945743-946339 (Clockwise)

Preceding gene: 195978028

Following gene: 195978030

Centisome position: 46.72

GC content: 42.38

Gene sequence:

>597_bases
ATGGAAGCAATGATAGCTGCCTATTTGGCTGATCATAGAGAAAAGATACCACTTGGTCAGGTTGTTGATTGCTTTAAGGG
GAAGGCTGTTTCTCGTAAGGCTGAGGCTGGTGAATTTGGTCTGATTAATCTGTCTGATATGGGACAGCTAGGAATTGACT
ATCGTCAAGTCAGAGCCTTTCATATGGATAGACGACAACTGTTGCGCTATATCTTAGAGGATGGAGATGTCTTGATTGCC
TCAAAGGGGACTGTTCAGAAGGTTTGTGTTTTTCATAAGCAAGAAAAGGAAATGGTAGCCTCCTCTAATATCACAGTGCT
GCGTCCTCAGAGGGTTTTGCGAGGCTATTATATCAAGTTCTTTTTGGAGTCTGCTATTGGTCAAGCCTTGTTAAAGGCGG
CGGATCATGGAAAGGACGTGATTAACCTATCGACCAAGGCTTTGCTTGATATCCCTGTACCAGTGATTCCTTTGGTTAAG
CAGGATTATTTGATTAATCAATATTTGCGAGGTCTGCATGACTATCAACGGAAAGTAAATAGAGCTGAGCAGGAGTGGCA
GTTTATTCAAAATGAAATTCAAAAAGGCTTGGGCTAG

Upstream 100 bases:

>100_bases
AGAGGCTCTAAAGTCTGTTGATTAGGGTAAAATAGCACTTGAAAATCGCTTAATAATATGATAGTATTAAAATACTATAA
TTTAATAGAAGGATACTTTT

Downstream 100 bases:

>100_bases
AGGTAAAATGTGAGCTTAATTGAACGAACAATAAAAATGCTATTAGCAACGATGGCTGCAATCTTTCTTGCCTCTCAGCT
ACAGCTGTCTTATGCCATAT

Product: type I restriction- system specificity subunit

Products: NA

Alternate protein names: Type I Restriction- System Specificty Subunit; Type I Restriction DNA Specificity Domain Protein; Restriction System DNA Specificity Domain Protein

Number of amino acids: Translated: 198; Mature: 198

Protein sequence:

>198_residues
MEAMIAAYLADHREKIPLGQVVDCFKGKAVSRKAEAGEFGLINLSDMGQLGIDYRQVRAFHMDRRQLLRYILEDGDVLIA
SKGTVQKVCVFHKQEKEMVASSNITVLRPQRVLRGYYIKFFLESAIGQALLKAADHGKDVINLSTKALLDIPVPVIPLVK
QDYLINQYLRGLHDYQRKVNRAEQEWQFIQNEIQKGLG

Sequences:

>Translated_198_residues
MEAMIAAYLADHREKIPLGQVVDCFKGKAVSRKAEAGEFGLINLSDMGQLGIDYRQVRAFHMDRRQLLRYILEDGDVLIA
SKGTVQKVCVFHKQEKEMVASSNITVLRPQRVLRGYYIKFFLESAIGQALLKAADHGKDVINLSTKALLDIPVPVIPLVK
QDYLINQYLRGLHDYQRKVNRAEQEWQFIQNEIQKGLG
>Mature_198_residues
MEAMIAAYLADHREKIPLGQVVDCFKGKAVSRKAEAGEFGLINLSDMGQLGIDYRQVRAFHMDRRQLLRYILEDGDVLIA
SKGTVQKVCVFHKQEKEMVASSNITVLRPQRVLRGYYIKFFLESAIGQALLKAADHGKDVINLSTKALLDIPVPVIPLVK
QDYLINQYLRGLHDYQRKVNRAEQEWQFIQNEIQKGLG

Specific function: Unknown

COG id: COG0732

COG function: function code V; Restriction endonuclease S subunits

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22557; Mature: 22557

Theoretical pI: Translated: 9.49; Mature: 9.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEAMIAAYLADHREKIPLGQVVDCFKGKAVSRKAEAGEFGLINLSDMGQLGIDYRQVRAF
CHHHHHHHHHHHHHCCCHHHHHHHHCCCHHCCCCCCCCCCEEECCCCCHHCCHHHHHHHH
HMDRRQLLRYILEDGDVLIASKGTVQKVCVFHKQEKEMVASSNITVLRPQRVLRGYYIKF
HHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCEEECHHHHHHHHHHHH
FLESAIGQALLKAADHGKDVINLSTKALLDIPVPVIPLVKQDYLINQYLRGLHDYQRKVN
HHHHHHHHHHHHHHHCCCCEEHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
RAEQEWQFIQNEIQKGLG
HHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MEAMIAAYLADHREKIPLGQVVDCFKGKAVSRKAEAGEFGLINLSDMGQLGIDYRQVRAF
CHHHHHHHHHHHHHCCCHHHHHHHHCCCHHCCCCCCCCCCEEECCCCCHHCCHHHHHHHH
HMDRRQLLRYILEDGDVLIASKGTVQKVCVFHKQEKEMVASSNITVLRPQRVLRGYYIKF
HHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCEEECHHHHHHHHHHHH
FLESAIGQALLKAADHGKDVINLSTKALLDIPVPVIPLVKQDYLINQYLRGLHDYQRKVN
HHHHHHHHHHHHHHHCCCCEEHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
RAEQEWQFIQNEIQKGLG
HHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA