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The map label for this gene is ywbD [H]

Identifier: 195977991

GI number: 195977991

Start: 905502

End: 906665

Strand: Direct

Name: ywbD [H]

Synonym: Sez_0863

Alternate gene names: 195977991

Gene position: 905502-906665 (Clockwise)

Preceding gene: 195977989

Following gene: 195977992

Centisome position: 44.73

GC content: 40.03

Gene sequence:

>1164_bases
ATGAATAAGGTCTGTATTAATCCCCTTGTTGAACGCAAGATAGCAGCAGGGATACAATTACTAGATGAAAAGGATTTTGA
TGGCACCATTTGGGACAATCAACTAGTGCAGCTTGTTAATTCATCTCATCATCTTATCGGCACAGCTTACCTTTCAAAGC
AACATAAGGGAGTAGGCTGGTATCTAGGAAGGTCTGTTAAGAAATTGTCGGTTTCTTATTTTGTGACCTTATTTAAGACA
GCTAAGAAGAAAAGAGAGCATTTTGCCGCGTCTGAATGGACAAATGCTTACCGTCTTTTTAACCAAGACGGTGATGATTT
TGGAGGACTAACCATAGACCTCTATAAGGACTTTGCTTTATTTTCTTGGTATAATGTCTTTGTTTATCAAGAAAAGGAGC
TTATTATTCAGGCTTTTCGAGAGGTTTTTCCTGAGGTCAGGGGAGCTTATGAAAAGATTCGCTTTAAGGGACCAGATAAG
GAGACGGCTCATTTGTATGGCGCGTCTGCTCCTGATACCTTTACTATTTTAGAAAATGGTGTATCCTATCAGGTATTTTT
AAATGATGGCTTGATGACTGGGATCTTTCTTGATCAGCATGAGGTTAGACGAGGTCTGGTGGAGGGCTTAGCACTTGGAA
AGTCTGTTTTAAACCTGTTTTCATATACGGCAGCTTTTTCTGTAGCTGCGGCAATGGGCGGTGCAGTTGAGACAACCTCT
GTTGATTTGGCAAAGCGCTCCATAGAGTTATCAAAGGCTCATTTTATTCAAAATCAGTTGGACCTATCCAGTCATCAGCT
GGTCGTTATGGACGTTTTTGACTATTTTAAGTATGCTAAGCGAAAGCAGCTTTCTTTTGATCTTATTATCATTGATCCAC
CAAGCTTTGCTAGACACAAAAAGCAGACGTTTTCGGTGAGCAAGGACTACCATCAATTAATCGCTGAGGCTCTAGACCTA
TTGGCCCCCAAGGGAACAATGATCGCTTCAACAAATGCTGCCAATATGACTGTTAACCAGTTTAAAAAGCAAATTATCAA
AGGATTGGGAGGCAGGCCATTAGCTCAGATGACACTTGAGCAGCTTCCAAGTGATTTTACTATCAATAAAGCAGATGAAA
GAAGTAATTATTTAAAGGTATTTACTATAAGGGTACGAGAATGA

Upstream 100 bases:

>100_bases
TAAAATCTCAGATTAAATTATACCAAAAATATGGAGCTAATGCTTGCAATAAGTTTAAATCTAGTATGATTTTTTAATAG
TTTTTGTTATAATAGAAACT

Downstream 100 bases:

>100_bases
AAATTGTAGCACCAGTCATGCCAAGAAATGTTGAAGAGGCTCAATCTATCGACGTTTCTAAATATCAAGATGTTAATTTA
ATCGAGTGGCGAGCAGACTT

Product: SAM-dependent methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 387; Mature: 387

Protein sequence:

>387_residues
MNKVCINPLVERKIAAGIQLLDEKDFDGTIWDNQLVQLVNSSHHLIGTAYLSKQHKGVGWYLGRSVKKLSVSYFVTLFKT
AKKKREHFAASEWTNAYRLFNQDGDDFGGLTIDLYKDFALFSWYNVFVYQEKELIIQAFREVFPEVRGAYEKIRFKGPDK
ETAHLYGASAPDTFTILENGVSYQVFLNDGLMTGIFLDQHEVRRGLVEGLALGKSVLNLFSYTAAFSVAAAMGGAVETTS
VDLAKRSIELSKAHFIQNQLDLSSHQLVVMDVFDYFKYAKRKQLSFDLIIIDPPSFARHKKQTFSVSKDYHQLIAEALDL
LAPKGTMIASTNAANMTVNQFKKQIIKGLGGRPLAQMTLEQLPSDFTINKADERSNYLKVFTIRVRE

Sequences:

>Translated_387_residues
MNKVCINPLVERKIAAGIQLLDEKDFDGTIWDNQLVQLVNSSHHLIGTAYLSKQHKGVGWYLGRSVKKLSVSYFVTLFKT
AKKKREHFAASEWTNAYRLFNQDGDDFGGLTIDLYKDFALFSWYNVFVYQEKELIIQAFREVFPEVRGAYEKIRFKGPDK
ETAHLYGASAPDTFTILENGVSYQVFLNDGLMTGIFLDQHEVRRGLVEGLALGKSVLNLFSYTAAFSVAAAMGGAVETTS
VDLAKRSIELSKAHFIQNQLDLSSHQLVVMDVFDYFKYAKRKQLSFDLIIIDPPSFARHKKQTFSVSKDYHQLIAEALDL
LAPKGTMIASTNAANMTVNQFKKQIIKGLGGRPLAQMTLEQLPSDFTINKADERSNYLKVFTIRVRE
>Mature_387_residues
MNKVCINPLVERKIAAGIQLLDEKDFDGTIWDNQLVQLVNSSHHLIGTAYLSKQHKGVGWYLGRSVKKLSVSYFVTLFKT
AKKKREHFAASEWTNAYRLFNQDGDDFGGLTIDLYKDFALFSWYNVFVYQEKELIIQAFREVFPEVRGAYEKIRFKGPDK
ETAHLYGASAPDTFTILENGVSYQVFLNDGLMTGIFLDQHEVRRGLVEGLALGKSVLNLFSYTAAFSVAAAMGGAVETTS
VDLAKRSIELSKAHFIQNQLDLSSHQLVVMDVFDYFKYAKRKQLSFDLIIIDPPSFARHKKQTFSVSKDYHQLIAEALDL
LAPKGTMIASTNAANMTVNQFKKQIIKGLGGRPLAQMTLEQLPSDFTINKADERSNYLKVFTIRVRE

Specific function: Unknown

COG id: COG1092

COG function: function code R; Predicted SAM-dependent methyltransferases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PUA domain [H]

Homologues:

Organism=Escherichia coli, GI145693111, Length=329, Percent_Identity=27.9635258358663, Blast_Score=135, Evalue=6e-33,
Organism=Escherichia coli, GI1787181, Length=299, Percent_Identity=28.0936454849498, Blast_Score=105, Evalue=5e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002478
- InterPro:   IPR015947
- InterPro:   IPR019614 [H]

Pfam domain/function: PF10672 Methyltrans_SAM [H]

EC number: NA

Molecular weight: Translated: 43786; Mature: 43786

Theoretical pI: Translated: 9.34; Mature: 9.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKVCINPLVERKIAAGIQLLDEKDFDGTIWDNQLVQLVNSSHHLIGTAYLSKQHKGVGW
CCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCEEEEHHHHHCCCCCCH
YLGRSVKKLSVSYFVTLFKTAKKKREHFAASEWTNAYRLFNQDGDDFGGLTIDLYKDFAL
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEHHHHHHH
FSWYNVFVYQEKELIIQAFREVFPEVRGAYEKIRFKGPDKETAHLYGASAPDTFTILENG
HHHEEEEEEEHHHHHHHHHHHHHHHHHCHHHHEEECCCCCCCCEEECCCCCCEEEEEECC
VSYQVFLNDGLMTGIFLDQHEVRRGLVEGLALGKSVLNLFSYTAAFSVAAAMGGAVETTS
CEEEEEECCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHH
VDLAKRSIELSKAHFIQNQLDLSSHQLVVMDVFDYFKYAKRKQLSFDLIIIDPPSFARHK
HHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHCCCEEEEEEECCCCHHHHH
KQTFSVSKDYHQLIAEALDLLAPKGTMIASTNAANMTVNQFKKQIIKGLGGRPLAQMTLE
HHHHCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHCCCCCCHHHHHHH
QLPSDFTINKADERSNYLKVFTIRVRE
HCCCCCEECCCCCCCCEEEEEEEEECC
>Mature Secondary Structure
MNKVCINPLVERKIAAGIQLLDEKDFDGTIWDNQLVQLVNSSHHLIGTAYLSKQHKGVGW
CCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCEEEEHHHHHCCCCCCH
YLGRSVKKLSVSYFVTLFKTAKKKREHFAASEWTNAYRLFNQDGDDFGGLTIDLYKDFAL
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEHHHHHHH
FSWYNVFVYQEKELIIQAFREVFPEVRGAYEKIRFKGPDKETAHLYGASAPDTFTILENG
HHHEEEEEEEHHHHHHHHHHHHHHHHHCHHHHEEECCCCCCCCEEECCCCCCEEEEEECC
VSYQVFLNDGLMTGIFLDQHEVRRGLVEGLALGKSVLNLFSYTAAFSVAAAMGGAVETTS
CEEEEEECCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHH
VDLAKRSIELSKAHFIQNQLDLSSHQLVVMDVFDYFKYAKRKQLSFDLIIIDPPSFARHK
HHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHCCCEEEEEEECCCCHHHHH
KQTFSVSKDYHQLIAEALDLLAPKGTMIASTNAANMTVNQFKKQIIKGLGGRPLAQMTLE
HHHHCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHCCCCCCHHHHHHH
QLPSDFTINKADERSNYLKVFTIRVRE
HCCCCCEECCCCCCCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7934828; 9384377 [H]