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The map label for this gene is sodA [H]

Identifier: 195977790

GI number: 195977790

Start: 677657

End: 678262

Strand: Direct

Name: sodA [H]

Synonym: Sez_0654

Alternate gene names: 195977790

Gene position: 677657-678262 (Clockwise)

Preceding gene: 195977789

Following gene: 195977792

Centisome position: 33.48

GC content: 44.06

Gene sequence:

>606_bases
ATGACCATTATATTACCGGATCTTCCGTACGCATATGATGCCCTTGAGCCTTATTTTGACACAGAAACAATGACGCTTCA
TCATGATAAGCACCATGCCACCTATGTGGCTAATACCAACGCTGCTTTGGAAAAATACCCAGAGCTAGGAGAAAATCTAG
AGGAATTATTAGCAGATGTAAACAGCATTCCTGCTGACATTCGTCAGGCTGTGATTAATAATGGCGGTGGCCATTTGAAC
CATGCGCTTTTCTGGGAGCTGCTTTCTCCAGAAAAGCAAGAGGTTTCTGCTGATGTCGCAGCAGCTATTGATGACGCTTT
TGGTTCCTTTGCTGCCTTTAAAGAGCAATTCACAGCAGCAGCTACGGGTCGTTTTGGCTCAGGTTGGGCCTGGCTGGTTG
TGAATAAGGCTGGTCAGCTTGAAATCACATCAACTGCTAATCAGGACACACCAATCTCAGAGGGCAAGCAACCTATTTTA
GCACTTGATGTTTGGGAGCATGCTTATTACCTCAATTACCGCAATGTTCGTCCAAATTATATCAAGGCCTTCTTTGAAAC
CATTAACTGGAAAAAGGTCTCAGAGCTTTACCAAGCTGCAAAATAA

Upstream 100 bases:

>100_bases
ATACTGACCTCTCAGACCTATGAGCATCAATCAAATTAGTTGAAAGCCTCTATTTTTTGAGATAAGATAGACTTATCATA
AAGGAAAAGAGGAAAGAGAC

Downstream 100 bases:

>100_bases
TAGAAGTCAGTTACCAATCTCAGAAGTAGATTGGTTTTTTAAGTGCACTAATAAATTACTAGTGTAGGTGGTAAAAGCCT
CCAAGTCTTTTGAAAATATT

Product: superoxide dismutase [Mn] SodA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 201; Mature: 200

Protein sequence:

>201_residues
MTIILPDLPYAYDALEPYFDTETMTLHHDKHHATYVANTNAALEKYPELGENLEELLADVNSIPADIRQAVINNGGGHLN
HALFWELLSPEKQEVSADVAAAIDDAFGSFAAFKEQFTAAATGRFGSGWAWLVVNKAGQLEITSTANQDTPISEGKQPIL
ALDVWEHAYYLNYRNVRPNYIKAFFETINWKKVSELYQAAK

Sequences:

>Translated_201_residues
MTIILPDLPYAYDALEPYFDTETMTLHHDKHHATYVANTNAALEKYPELGENLEELLADVNSIPADIRQAVINNGGGHLN
HALFWELLSPEKQEVSADVAAAIDDAFGSFAAFKEQFTAAATGRFGSGWAWLVVNKAGQLEITSTANQDTPISEGKQPIL
ALDVWEHAYYLNYRNVRPNYIKAFFETINWKKVSELYQAAK
>Mature_200_residues
TIILPDLPYAYDALEPYFDTETMTLHHDKHHATYVANTNAALEKYPELGENLEELLADVNSIPADIRQAVINNGGGHLNH
ALFWELLSPEKQEVSADVAAAIDDAFGSFAAFKEQFTAAATGRFGSGWAWLVVNKAGQLEITSTANQDTPISEGKQPILA
LDVWEHAYYLNYRNVRPNYIKAFFETINWKKVSELYQAAK

Specific function: Destroys radicals which are normally produced within the cells and which are toxic to biological systems [H]

COG id: COG0605

COG function: function code P; Superoxide dismutase

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the iron/manganese superoxide dismutase family [H]

Homologues:

Organism=Homo sapiens, GI67782307, Length=203, Percent_Identity=50.2463054187192, Blast_Score=185, Evalue=2e-47,
Organism=Homo sapiens, GI67782305, Length=203, Percent_Identity=50.2463054187192, Blast_Score=185, Evalue=2e-47,
Organism=Homo sapiens, GI67782309, Length=200, Percent_Identity=42.5, Blast_Score=148, Evalue=3e-36,
Organism=Escherichia coli, GI1790342, Length=208, Percent_Identity=50, Blast_Score=210, Evalue=7e-56,
Organism=Escherichia coli, GI1787946, Length=196, Percent_Identity=44.8979591836735, Blast_Score=172, Evalue=1e-44,
Organism=Caenorhabditis elegans, GI17506561, Length=202, Percent_Identity=44.0594059405941, Blast_Score=164, Evalue=2e-41,
Organism=Caenorhabditis elegans, GI17569479, Length=200, Percent_Identity=43, Blast_Score=157, Evalue=3e-39,
Organism=Saccharomyces cerevisiae, GI6321796, Length=206, Percent_Identity=39.3203883495146, Blast_Score=147, Evalue=1e-36,
Organism=Drosophila melanogaster, GI17136812, Length=200, Percent_Identity=44.5, Blast_Score=168, Evalue=2e-42,

Paralogues:

None

Copy number: 2980 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001189
- InterPro:   IPR019833
- InterPro:   IPR019832
- InterPro:   IPR019831 [H]

Pfam domain/function: PF02777 Sod_Fe_C; PF00081 Sod_Fe_N [H]

EC number: =1.15.1.1 [H]

Molecular weight: Translated: 22477; Mature: 22346

Theoretical pI: Translated: 4.57; Mature: 4.57

Prosite motif: PS00088 SOD_MN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIILPDLPYAYDALEPYFDTETMTLHHDKHHATYVANTNAALEKYPELGENLEELLADV
CEEEECCCCCHHHHCCCCCCCCEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHH
NSIPADIRQAVINNGGGHLNHALFWELLSPEKQEVSADVAAAIDDAFGSFAAFKEQFTAA
HCCCHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ATGRFGSGWAWLVVNKAGQLEITSTANQDTPISEGKQPILALDVWEHAYYLNYRNVRPNY
HCCCCCCCEEEEEEECCCCEEEECCCCCCCCCCCCCCCEEEEEEHHHEEEEECCCCCHHH
IKAFFETINWKKVSELYQAAK
HHHHHHHCCHHHHHHHHHHCC
>Mature Secondary Structure 
TIILPDLPYAYDALEPYFDTETMTLHHDKHHATYVANTNAALEKYPELGENLEELLADV
EEEECCCCCHHHHCCCCCCCCEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHH
NSIPADIRQAVINNGGGHLNHALFWELLSPEKQEVSADVAAAIDDAFGSFAAFKEQFTAA
HCCCHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ATGRFGSGWAWLVVNKAGQLEITSTANQDTPISEGKQPILALDVWEHAYYLNYRNVRPNY
HCCCCCCCEEEEEEECCCCEEEECCCCCCCCCCCCCCCEEEEEEHHHEEEEECCCCCHHH
IKAFFETINWKKVSELYQAAK
HHHHHHHCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11296296 [H]