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The map label for this gene is yutD [H]

Identifier: 195977716

GI number: 195977716

Start: 604726

End: 605370

Strand: Direct

Name: yutD [H]

Synonym: Sez_0578

Alternate gene names: 195977716

Gene position: 604726-605370 (Clockwise)

Preceding gene: 195977715

Following gene: 195977717

Centisome position: 29.88

GC content: 39.38

Gene sequence:

>645_bases
ATGAAAACTAATGCTAAGGAAAGGAGCTATATGAAAAGAGATATTTCACCAGAGATGTATAATTACAATAAATTTCCCGG
TCCGGAATTTATTCATTTTGACCATTATGTTAAGGCTGAAGGCATTGAGTTATTGCTGCTGAAAAATGAAAAAAATGCTT
TTAATACAACAAGCTTTGGTCAGCGCTTTACAGAGATATTATTAAAGTATGATTATATTGTTGGAGATTGGGGCAACGAA
CAGCTGCGGCTCAAGGGCTTTTACAAGGATCATCATGATGTCAAAAAAGCTAGCCGTATTTCTAGATTAGAAGACTATAT
CAAAGAATTTTGTAACTTTGGCTGTGCTTATTTTGTTTTGGAAAACCCTAATCCCAAGGACATGCCAAAAGAGGAGGATA
GACCATCAAGGCGCAGGAAATCGTCTAAAGCCAATCGCCGCAGAAATCAGCCTCAGCATAGTCAGCAGGCACCTGCTAAA
GACAACTTCAAAAAGCTAACCAAGGATAGGTCAGCGGACAAGCCAAGCTTTACCAGCAAAAAGCGCCCAGCTCCTAATAA
GACCAAGGGAAACCAAAGGCGCTCTCGTACTAGTCAACTGAACCATAAAACGGATCACTTTATCATCAGAAAGAAGGACA
ATTAA

Upstream 100 bases:

>100_bases
TGGGCTGTCAGGAGCTGCTAGCCTGCCTGCTGAGACTAGCCCTTTGAAAAGAGCAAGTATAGCTCTTTGTAGAATAACCC
AGGATTAACGATTAACAAAC

Downstream 100 bases:

>100_bases
TCTATGAAACCATCAATCTATGGCCTAACGCGCGACGAGCTAATTGCTTGGGCGATTGACAATGGTCAAAAGGCATTCAG
AGCGACACAGATTTGGGACT

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 214; Mature: 214

Protein sequence:

>214_residues
MKTNAKERSYMKRDISPEMYNYNKFPGPEFIHFDHYVKAEGIELLLLKNEKNAFNTTSFGQRFTEILLKYDYIVGDWGNE
QLRLKGFYKDHHDVKKASRISRLEDYIKEFCNFGCAYFVLENPNPKDMPKEEDRPSRRRKSSKANRRRNQPQHSQQAPAK
DNFKKLTKDRSADKPSFTSKKRPAPNKTKGNQRRSRTSQLNHKTDHFIIRKKDN

Sequences:

>Translated_214_residues
MKTNAKERSYMKRDISPEMYNYNKFPGPEFIHFDHYVKAEGIELLLLKNEKNAFNTTSFGQRFTEILLKYDYIVGDWGNE
QLRLKGFYKDHHDVKKASRISRLEDYIKEFCNFGCAYFVLENPNPKDMPKEEDRPSRRRKSSKANRRRNQPQHSQQAPAK
DNFKKLTKDRSADKPSFTSKKRPAPNKTKGNQRRSRTSQLNHKTDHFIIRKKDN
>Mature_214_residues
MKTNAKERSYMKRDISPEMYNYNKFPGPEFIHFDHYVKAEGIELLLLKNEKNAFNTTSFGQRFTEILLKYDYIVGDWGNE
QLRLKGFYKDHHDVKKASRISRLEDYIKEFCNFGCAYFVLENPNPKDMPKEEDRPSRRRKSSKANRRRNQPQHSQQAPAK
DNFKKLTKDRSADKPSFTSKKRPAPNKTKGNQRRSRTSQLNHKTDHFIIRKKDN

Specific function: Unknown

COG id: COG4470

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009370 [H]

Pfam domain/function: PF06265 DUF1027 [H]

EC number: NA

Molecular weight: Translated: 25451; Mature: 25451

Theoretical pI: Translated: 10.59; Mature: 10.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTNAKERSYMKRDISPEMYNYNKFPGPEFIHFDHYVKAEGIELLLLKNEKNAFNTTSFG
CCCCHHHHHHHHHCCCCCHHCCCCCCCCCEEECCCEEECCCEEEEEEECCCCCCCCHHHH
QRFTEILLKYDYIVGDWGNEQLRLKGFYKDHHDVKKASRISRLEDYIKEFCNFGCAYFVL
HHHHHHHHHHHHEEECCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEE
ENPNPKDMPKEEDRPSRRRKSSKANRRRNQPQHSQQAPAKDNFKKLTKDRSADKPSFTSK
ECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHHCCCCCCCCCCC
KRPAPNKTKGNQRRSRTSQLNHKTDHFIIRKKDN
CCCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCC
>Mature Secondary Structure
MKTNAKERSYMKRDISPEMYNYNKFPGPEFIHFDHYVKAEGIELLLLKNEKNAFNTTSFG
CCCCHHHHHHHHHCCCCCHHCCCCCCCCCEEECCCEEECCCEEEEEEECCCCCCCCHHHH
QRFTEILLKYDYIVGDWGNEQLRLKGFYKDHHDVKKASRISRLEDYIKEFCNFGCAYFVL
HHHHHHHHHHHHEEECCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEE
ENPNPKDMPKEEDRPSRRRKSSKANRRRNQPQHSQQAPAKDNFKKLTKDRSADKPSFTSK
ECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHHCCCCCCCCCCC
KRPAPNKTKGNQRRSRTSQLNHKTDHFIIRKKDN
CCCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]