Click here to switch to the map view.

The map label for this gene is nrdI [H]

Identifier: 195977666

GI number: 195977666

Start: 548925

End: 549335

Strand: Direct

Name: nrdI [H]

Synonym: Sez_0525

Alternate gene names: 195977666

Gene position: 548925-549335 (Clockwise)

Preceding gene: 195977665

Following gene: 195977667

Centisome position: 27.12

GC content: 44.53

Gene sequence:

>411_bases
ATGGCTGCAAGGGTAATGCTTGTTTATTTTTCATCACGATCTAATAATACTCACCGCTTTGTACAAAAGCTAGATGCAAA
GGCCCTCAGGATTCCAATTAGTGGGGAGCCTCTCTTGGTTGATGAGGACTATATTCTTATTGTCCCCACCTATGCTGCTG
GTGGCTCAGACAGCAAGGGAGCTGTTCCCAAGCAGGTGATTCATTTTCTAAACAATGCTAACAATCGAAGGCACTGTAAG
GGGGTTATTTCCTCTGGCAATACTAACTTTGGTGATACCTTTGCTATTGCAGGACCCATTATTGCACAAAAATTGCAGGT
GCCGCTTTTGCACCAATTTGAATTGCTGGGGACACAAAGAGATGTCCTCAAGGTGCAGGCGATTTTAGCAGGTGATTGGC
TGTCATACTGA

Upstream 100 bases:

>100_bases
GCGCGAGCAGATGAGAACCATGACTTTTTCTCAGGAAATGGCTCTTCTTACGTGATGGGAGTTACTGAGGAAACCACTGA
TGACGATTGGGAGTTTTAAG

Downstream 100 bases:

>100_bases
TTATTACCGTAGAATGATCACACATTGTAACGAAAGGAAAAAAGAATGTCACAAAAAGAGTCCTACCTCTCATTAAATGC
CCTTACACGCTTTAAACGAG

Product: ribonucleotide reduction protein NrdI

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 136; Mature: 135

Protein sequence:

>136_residues
MAARVMLVYFSSRSNNTHRFVQKLDAKALRIPISGEPLLVDEDYILIVPTYAAGGSDSKGAVPKQVIHFLNNANNRRHCK
GVISSGNTNFGDTFAIAGPIIAQKLQVPLLHQFELLGTQRDVLKVQAILAGDWLSY

Sequences:

>Translated_136_residues
MAARVMLVYFSSRSNNTHRFVQKLDAKALRIPISGEPLLVDEDYILIVPTYAAGGSDSKGAVPKQVIHFLNNANNRRHCK
GVISSGNTNFGDTFAIAGPIIAQKLQVPLLHQFELLGTQRDVLKVQAILAGDWLSY
>Mature_135_residues
AARVMLVYFSSRSNNTHRFVQKLDAKALRIPISGEPLLVDEDYILIVPTYAAGGSDSKGAVPKQVIHFLNNANNRRHCKG
VISSGNTNFGDTFAIAGPIIAQKLQVPLLHQFELLGTQRDVLKVQAILAGDWLSY

Specific function: Probably involved in ribonucleotide reductase function [H]

COG id: COG1780

COG function: function code F; Protein involved in ribonucleotide reduction

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nrdI family [H]

Homologues:

Organism=Escherichia coli, GI1789029, Length=128, Percent_Identity=52.34375, Blast_Score=133, Evalue=3e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020852
- InterPro:   IPR004465 [H]

Pfam domain/function: PF07972 Flavodoxin_NdrI [H]

EC number: NA

Molecular weight: Translated: 14933; Mature: 14802

Theoretical pI: Translated: 9.83; Mature: 9.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAARVMLVYFSSRSNNTHRFVQKLDAKALRIPISGEPLLVDEDYILIVPTYAAGGSDSKG
CCCEEEEEEEECCCCCHHHHHHHHCCCEEEECCCCCEEEECCCEEEEEEECCCCCCCCCC
AVPKQVIHFLNNANNRRHCKGVISSGNTNFGDTFAIAGPIIAQKLQVPLLHQFELLGTQR
CCHHHHHHHHHCCCCCCEEEEEECCCCCCCCCEEEEHHHHHHHHCCCCHHHHHHHHCCCH
DVLKVQAILAGDWLSY
HHHHHHHHHHCCCCCC
>Mature Secondary Structure 
AARVMLVYFSSRSNNTHRFVQKLDAKALRIPISGEPLLVDEDYILIVPTYAAGGSDSKG
CCEEEEEEEECCCCCHHHHHHHHCCCEEEECCCCCEEEECCCEEEEEEECCCCCCCCCC
AVPKQVIHFLNNANNRRHCKGVISSGNTNFGDTFAIAGPIIAQKLQVPLLHQFELLGTQR
CCHHHHHHHHHCCCCCCEEEEEECCCCCCCCCEEEEHHHHHHHHCCCCHHHHHHHHCCCH
DVLKVQAILAGDWLSY
HHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11296296 [H]