Click here to switch to the map view.

The map label for this gene is gatC [H]

Identifier: 195977532

GI number: 195977532

Start: 417881

End: 418183

Strand: Direct

Name: gatC [H]

Synonym: Sez_0389

Alternate gene names: 195977532

Gene position: 417881-418183 (Clockwise)

Preceding gene: 195977531

Following gene: 195977533

Centisome position: 20.64

GC content: 40.92

Gene sequence:

>303_bases
ATGAAAATTTCTGAAGAAGAGGTTCGCCACGTTGCGGCCCTATCAAAGCTATCCTTTTCAGAAAGTGAAACAACTGAGTT
TGCGACAACATTATCAAAAATCGTTGACATGGTTGAATTGCTGAATGAAGTGGATACGACAGGTATTGCCATTACCACCA
CAATGGCAGACAAGAAAAATATCATGCGAGCTGATATCGCTGAGGCTGGAGTGGATCGCAAGTTCCTGTTTCAAAATGTT
CCTGAAAAAGAAAATCATTTCATCAAGGTACCAGCTATTCTTGATGATGGAGGAGATGCCTAA

Upstream 100 bases:

>100_bases
AGACTATGTAAAATTGGGTTATTCAGGCTGTTATCAAGCGTTTGAAACAGCAAGGCTTTATGGCTGATGATGGTCTGCTT
TACCTTGGATAGGAGAATTC

Downstream 100 bases:

>100_bases
TGTCTTTTAATCATCACACTATAGAAGAATTACATGAGCTTCTTGTTGCAAAGGACATTTCTGCAGTTGAGCTAACAAAG
GCAACCCTTGAGGATATCAA

Product: aspartyl/glutamyl-tRNA amidotransferase subunit C

Products: NA

Alternate protein names: Asp/Glu-ADT subunit C [H]

Number of amino acids: Translated: 100; Mature: 100

Protein sequence:

>100_residues
MKISEEEVRHVAALSKLSFSESETTEFATTLSKIVDMVELLNEVDTTGIAITTTMADKKNIMRADIAEAGVDRKFLFQNV
PEKENHFIKVPAILDDGGDA

Sequences:

>Translated_100_residues
MKISEEEVRHVAALSKLSFSESETTEFATTLSKIVDMVELLNEVDTTGIAITTTMADKKNIMRADIAEAGVDRKFLFQNV
PEKENHFIKVPAILDDGGDA
>Mature_100_residues
MKISEEEVRHVAALSKLSFSESETTEFATTLSKIVDMVELLNEVDTTGIAITTTMADKKNIMRADIAEAGVDRKFLFQNV
PEKENHFIKVPAILDDGGDA

Specific function: Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction take

COG id: COG0721

COG function: function code J; Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gatC family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003837 [H]

Pfam domain/function: PF02686 Glu-tRNAGln [H]

EC number: 6.3.5.-

Molecular weight: Translated: 11029; Mature: 11029

Theoretical pI: Translated: 4.37; Mature: 4.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKISEEEVRHVAALSKLSFSESETTEFATTLSKIVDMVELLNEVDTTGIAITTTMADKKN
CCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHH
IMRADIAEAGVDRKFLFQNVPEKENHFIKVPAILDDGGDA
HHHHHHHHHCCCHHHHHCCCCCCCCCEEEECEEECCCCCC
>Mature Secondary Structure
MKISEEEVRHVAALSKLSFSESETTEFATTLSKIVDMVELLNEVDTTGIAITTTMADKKN
CCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHH
IMRADIAEAGVDRKFLFQNVPEKENHFIKVPAILDDGGDA
HHHHHHHHHCCCHHHHHCCCCCCCCCEEEECEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA