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The map label for this gene is 195977373

Identifier: 195977373

GI number: 195977373

Start: 249041

End: 249754

Strand: Direct

Name: 195977373

Synonym: Sez_0226

Alternate gene names: NA

Gene position: 249041-249754 (Clockwise)

Preceding gene: 195977372

Following gene: 195977374

Centisome position: 12.3

GC content: 44.82

Gene sequence:

>714_bases
ATGGCCTATAATCGAATGACCTATACTATTGACAGCAGCATGCAGTTTCCTCTTGTTGAAATTGATTTGGACATGGGGGA
GTCTGTCTTTCTACAAAAAGGCAGTATGGTTTACCACACACCGTCAATCAGCTTAAACACCAAGCTCAATGGGCGTGGCT
CAGGTCTTGGCAAGCTGGTTGGTGCCATTGGCCGTTCAATGGTTTCAGGAGAATCCATGTTTATCACACAGGCGATTGCT
AATGATGTTAGTGGCAAGCTAGCGCTTGCCCCTTCAATGCCTGGTCAGGTTATTGCTCTTGAGCTAGGGGTAGATCAATA
CCGTTTGAATGACGGAGCCTTCTTGGCTTTAGATGGCTCAGCTCACTACACCATGAAGCGCCAAAAACTTGGTAAGGCCT
TATTTAGCGGTCAGGGTGGCTTTTTTGTGATGTCAACACAGGGAGAAGGAACCCTGCTGGTCAATGCTTTTGGTTCGATT
AAAAAAATCACGCTTCATGGCGACAGCATGACGATTGATAATAGTCATGTGGTTGCTTGGAGTCAGGATTTGGACTATGA
TATTCATTTGGAAAATGGCTTTATGCAGTCTATTGGTACAGGTGAGGGAGTGGTCAATACCTTTAGCGGATACGGAGATG
TCTATGTGCAAAGCCTGAATCTTCAGCAATTTGCTGGAGTTTTACAGAGCTATATTGTCACAGGTAGTCATTAA

Upstream 100 bases:

>100_bases
GAGACTGTTTAGGAATGGCGACGACAGTAGCTAGTGGACAATGCTGCCAAAAAAGACTATACTTGATTGTATCAACAAAA
TCATACAAAGGAGTGGTGTT

Downstream 100 bases:

>100_bases
ACAGCTGGGAGTAGACCAAGCCTTGCCAATTGATGGATTGAAATGGATATGACAGGTTCGTGGTTGCCAGAGTATATTGT
CGCTTTCTTTGCTGGGGTGT

Product: HTH DNA-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 237; Mature: 236

Protein sequence:

>237_residues
MAYNRMTYTIDSSMQFPLVEIDLDMGESVFLQKGSMVYHTPSISLNTKLNGRGSGLGKLVGAIGRSMVSGESMFITQAIA
NDVSGKLALAPSMPGQVIALELGVDQYRLNDGAFLALDGSAHYTMKRQKLGKALFSGQGGFFVMSTQGEGTLLVNAFGSI
KKITLHGDSMTIDNSHVVAWSQDLDYDIHLENGFMQSIGTGEGVVNTFSGYGDVYVQSLNLQQFAGVLQSYIVTGSH

Sequences:

>Translated_237_residues
MAYNRMTYTIDSSMQFPLVEIDLDMGESVFLQKGSMVYHTPSISLNTKLNGRGSGLGKLVGAIGRSMVSGESMFITQAIA
NDVSGKLALAPSMPGQVIALELGVDQYRLNDGAFLALDGSAHYTMKRQKLGKALFSGQGGFFVMSTQGEGTLLVNAFGSI
KKITLHGDSMTIDNSHVVAWSQDLDYDIHLENGFMQSIGTGEGVVNTFSGYGDVYVQSLNLQQFAGVLQSYIVTGSH
>Mature_236_residues
AYNRMTYTIDSSMQFPLVEIDLDMGESVFLQKGSMVYHTPSISLNTKLNGRGSGLGKLVGAIGRSMVSGESMFITQAIAN
DVSGKLALAPSMPGQVIALELGVDQYRLNDGAFLALDGSAHYTMKRQKLGKALFSGQGGFFVMSTQGEGTLLVNAFGSIK
KITLHGDSMTIDNSHVVAWSQDLDYDIHLENGFMQSIGTGEGVVNTFSGYGDVYVQSLNLQQFAGVLQSYIVTGSH

Specific function: Unknown

COG id: COG2013

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002838
- InterPro:   IPR016031 [H]

Pfam domain/function: PF01987 DUF124 [H]

EC number: NA

Molecular weight: Translated: 25429; Mature: 25298

Theoretical pI: Translated: 5.52; Mature: 5.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAYNRMTYTIDSSMQFPLVEIDLDMGESVFLQKGSMVYHTPSISLNTKLNGRGSGLGKLV
CCCCEEEEEECCCCCCEEEEEECCCCCEEEEECCCEEEECCCEEEEEEECCCCCCHHHHH
GAIGRSMVSGESMFITQAIANDVSGKLALAPSMPGQVIALELGVDQYRLNDGAFLALDGS
HHHHHHHCCCCCEEEEEHHHCCCCCEEEECCCCCCEEEEEEECCCEEEECCCEEEEECCC
AHYTMKRQKLGKALFSGQGGFFVMSTQGEGTLLVNAFGSIKKITLHGDSMTIDNSHVVAW
CCEEEHHHHHHHHHHCCCCCEEEEEECCCCEEEEEECCCEEEEEEECCEEEECCCEEEEE
SQDLDYDIHLENGFMQSIGTGEGVVNTFSGYGDVYVQSLNLQQFAGVLQSYIVTGSH
ECCCCEEEEECCCHHHHCCCCCCEEEECCCCCEEEEEEECHHHHHHHHHHHEECCCC
>Mature Secondary Structure 
AYNRMTYTIDSSMQFPLVEIDLDMGESVFLQKGSMVYHTPSISLNTKLNGRGSGLGKLV
CCCEEEEEECCCCCCEEEEEECCCCCEEEEECCCEEEECCCEEEEEEECCCCCCHHHHH
GAIGRSMVSGESMFITQAIANDVSGKLALAPSMPGQVIALELGVDQYRLNDGAFLALDGS
HHHHHHHCCCCCEEEEEHHHCCCCCEEEECCCCCCEEEEEEECCCEEEECCCEEEEECCC
AHYTMKRQKLGKALFSGQGGFFVMSTQGEGTLLVNAFGSIKKITLHGDSMTIDNSHVVAW
CCEEEHHHHHHHHHHCCCCCEEEEEECCCCEEEEEECCCEEEEEEECCEEEECCCEEEEE
SQDLDYDIHLENGFMQSIGTGEGVVNTFSGYGDVYVQSLNLQQFAGVLQSYIVTGSH
ECCCCEEEEECCCHHHHCCCCCCEEEECCCCCEEEEEEECHHHHHHHHHHHEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA