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The map label for this gene is ytxE [H]

Identifier: 195953009

GI number: 195953009

Start: 566712

End: 567527

Strand: Direct

Name: ytxE [H]

Synonym: HY04AAS1_0634

Alternate gene names: 195953009

Gene position: 566712-567527 (Clockwise)

Preceding gene: 195953008

Following gene: 195953010

Centisome position: 36.34

GC content: 36.03

Gene sequence:

>816_bases
ATGGCTAAAAAACATAAATGTCCGGAAGAAGCCTCTGAAAGATGGGCTATACCATACGCTGATTTTTTAACACTTCTTTT
AGCTCTTTTCATTTCTTTATATGCAATAATGAGAGGGTCTAAAGCTATACCAATATATGCAGAGGCTTTTGCAAAAGCTA
TGGGCATGAGAATACTCCCATTTGAGCAAACATTACCGTCACAAATATTACCACAACCAGCACTTCCAAAGATTCAATTA
ACCCAAAAGGGTCAATATATAAACATGCAATTGAAGAGAATAGAGCAAATGTTAAAAAAACAAGGCCTAGAAGGTAAGTT
CAAAGTTAAACTTGTACCTCAGGGTATTAAACTTATACTTCAAGACACTGTACTATTTAAAAGCGGGAGCGCTGATATAG
ATCCTAAGTATTACTCATTGCTAGATTCTATATACAAAATAATTTCAAGCTTGCCAAATCCCATAGAAATAGATGGTTTT
ACCGACAACACTCCCATACATACACTTACATTTCCCTCAAACTGGGAACTATCTACCGATAGAGCGGCTTCCGTTGCTAA
GTACTTCATATTTAAAGGTTTTGATCCATCAAAGATAAAGATAGCTGGGTATGGCAAGTATCACCCATTGGTGCCAAATA
CAACACCGCAAAATAAAGCTATGAACAGAAGGGTTGAAATAACCATATTGAATATAAAAGGAAGTGAGCTTACTACGCTC
GCACAATATGAAAATCCAAACAACAAATGGGAGCAAATAGAAAGAAAATGGGGTATCATCCCAAATGCTCAAAATCCCAA
TAACCAATCTCAGTAA

Upstream 100 bases:

>100_bases
TTATGGCTGGTTATATGACAATAGAGGGTATCAGGCTTATAGCAAAAGGTGAAAACCCAAGACTTATAGAAGAAAAGCTT
AATGCTTATGCGTGACAAAT

Downstream 100 bases:

>100_bases
ATTTTTGGTTTTTCATATATAATATTTATATGCTAAAGTACGATATAGTTATAATAGGCGGTGGCGGTGCTGGATTAATG
GCTGCCATAGAAGCTTCTAA

Product: OmpA/MotB domain-containing protein

Products: NA

Alternate protein names: ORF2 [H]

Number of amino acids: Translated: 271; Mature: 270

Protein sequence:

>271_residues
MAKKHKCPEEASERWAIPYADFLTLLLALFISLYAIMRGSKAIPIYAEAFAKAMGMRILPFEQTLPSQILPQPALPKIQL
TQKGQYINMQLKRIEQMLKKQGLEGKFKVKLVPQGIKLILQDTVLFKSGSADIDPKYYSLLDSIYKIISSLPNPIEIDGF
TDNTPIHTLTFPSNWELSTDRAASVAKYFIFKGFDPSKIKIAGYGKYHPLVPNTTPQNKAMNRRVEITILNIKGSELTTL
AQYENPNNKWEQIERKWGIIPNAQNPNNQSQ

Sequences:

>Translated_271_residues
MAKKHKCPEEASERWAIPYADFLTLLLALFISLYAIMRGSKAIPIYAEAFAKAMGMRILPFEQTLPSQILPQPALPKIQL
TQKGQYINMQLKRIEQMLKKQGLEGKFKVKLVPQGIKLILQDTVLFKSGSADIDPKYYSLLDSIYKIISSLPNPIEIDGF
TDNTPIHTLTFPSNWELSTDRAASVAKYFIFKGFDPSKIKIAGYGKYHPLVPNTTPQNKAMNRRVEITILNIKGSELTTL
AQYENPNNKWEQIERKWGIIPNAQNPNNQSQ
>Mature_270_residues
AKKHKCPEEASERWAIPYADFLTLLLALFISLYAIMRGSKAIPIYAEAFAKAMGMRILPFEQTLPSQILPQPALPKIQLT
QKGQYINMQLKRIEQMLKKQGLEGKFKVKLVPQGIKLILQDTVLFKSGSADIDPKYYSLLDSIYKIISSLPNPIEIDGFT
DNTPIHTLTFPSNWELSTDRAASVAKYFIFKGFDPSKIKIAGYGKYHPLVPNTTPQNKAMNRRVEITILNIKGSELTTLA
QYENPNNKWEQIERKWGIIPNAQNPNNQSQ

Specific function: May be involved in some transport function [H]

COG id: COG1360

COG function: function code N; Flagellar motor protein

Gene ontology:

Cell location: Cell membrane; Single-pass type II membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

Organism=Escherichia coli, GI1788198, Length=279, Percent_Identity=26.1648745519713, Blast_Score=92, Evalue=3e-20,
Organism=Escherichia coli, GI48994946, Length=147, Percent_Identity=32.6530612244898, Blast_Score=80, Evalue=2e-16,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006665 [H]

Pfam domain/function: PF00691 OmpA [H]

EC number: NA

Molecular weight: Translated: 30755; Mature: 30624

Theoretical pI: Translated: 10.04; Mature: 10.04

Prosite motif: PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKKHKCPEEASERWAIPYADFLTLLLALFISLYAIMRGSKAIPIYAEAFAKAMGMRILP
CCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCEEEC
FEQTLPSQILPQPALPKIQLTQKGQYINMQLKRIEQMLKKQGLEGKFKVKLVPQGIKLIL
HHHHCCHHHCCCCCCCCEEEECCCCEEHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHH
QDTVLFKSGSADIDPKYYSLLDSIYKIISSLPNPIEIDGFTDNTPIHTLTFPSNWELSTD
HHHHEEECCCCCCCHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCEEEEECCCCCCCCCH
RAASVAKYFIFKGFDPSKIKIAGYGKYHPLVPNTTPQNKAMNRRVEITILNIKGSELTTL
HHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCHHHCCEEEEEEEEECCCCEEEE
AQYENPNNKWEQIERKWGIIPNAQNPNNQSQ
EECCCCCHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure 
AKKHKCPEEASERWAIPYADFLTLLLALFISLYAIMRGSKAIPIYAEAFAKAMGMRILP
CCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCEEEC
FEQTLPSQILPQPALPKIQLTQKGQYINMQLKRIEQMLKKQGLEGKFKVKLVPQGIKLIL
HHHHCCHHHCCCCCCCCEEEECCCCEEHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHH
QDTVLFKSGSADIDPKYYSLLDSIYKIISSLPNPIEIDGFTDNTPIHTLTFPSNWELSTD
HHHHEEECCCCCCCHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCEEEEECCCCCCCCCH
RAASVAKYFIFKGFDPSKIKIAGYGKYHPLVPNTTPQNKAMNRRVEITILNIKGSELTTL
HHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCHHHCCEEEEEEEEECCCCEEEE
AQYENPNNKWEQIERKWGIIPNAQNPNNQSQ
EECCCCCHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8200532 [H]