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The map label for this gene is glgB [H]

Identifier: 195952987

GI number: 195952987

Start: 546778

End: 548673

Strand: Direct

Name: glgB [H]

Synonym: HY04AAS1_0612

Alternate gene names: 195952987

Gene position: 546778-548673 (Clockwise)

Preceding gene: 195952986

Following gene: 195952988

Centisome position: 35.06

GC content: 36.71

Gene sequence:

>1896_bases
ATGGCTTATTATAAATACAATTACGATATAAGCCTTTTAACCGATGAAGATTTGTATCTTTTTAACGAAGGAACGCATTA
TCATCTTTATGAAAAGCTTGGAGCTCATGTACTTGAAGGTGGAGTATATTTTGCAGTTTGGGCTCCAAACGCAAAAGAAG
TCTATGTAGAGGGTAGTTTTAACTTTTGGAATAAAAAAGAATACCCTTTAAGACCCAAAGGAAGCTCTGGCATATGGGAA
ATCTTCATAGAGGGTCTTAAAAGCTATGAACTTTATAAGTATTACATAGTCTCAAACTTTGGATACGAGGTAGAAAAAAG
AGATCCATTCGCGTTTTATACAGAAGTCCCACCAAAAAGTGCCGGTATAATTTACGATATATCTGGCTATCAATGGAAAG
ATGATTTATGGCTTTCAAAAAGAAGACAGTCAAACCACTACAAAGAACCCATAAGCATATACGAAGTGCATCTTGGTTCT
TGGAGAAGAACGTTAGAAAACGAATTTCTATCTTATAAGGATATAGCCCATCAGCTTGTAGAGTATGTAAAAGATATGGG
ATTTACCCATGTAGAGTTTTTACCTATTATGGAGCATCCTTTTTACGGGTCTTGGGGATATCAAACGCTTTCTTATTTTG
CTCCCACATCCAGACATGGAGAGCCAAAAGATTTTATGTATCTTGTAGAACTTTTGCATCAAAACGATATAGGTGTGATA
CTCGATTGGGTGCCATCTCATTTTGCCACAGACGATTATGGGCTTTCTTTCTTTGACGGGACTCATCTTTACGAGCACAT
GGACAAAAGAAAAGGTTATCATCCGGATTGGGGGAGCTATATATTTAACTATGGAAGACATGAAGTTAGGGCGTTTTTAA
TAAGCAGTGCGAATTTTTGGTTTAATAAATATCATGTAGATGGTATAAGAGTGGATGCCGTTGCCTCCATGCTTTATCTT
GATTATTCAAGAAAAGAAGGTGAATGGGAACCAAATATTTACGGTGGTAAAGAAAATTTAGAAGCTATTGATTGTCTAAG
GAAACTAAATGAAGCAGTATATATCTTTAATCCGGGGATATTTACGGTAGCAGAAGAATCCACCGCTTGGCCTATGGTTA
CAAAACCCACCTACATCGGGGGTTTGGGGTTTGGCTTTAAGTGGGATATGGGCTGGATGCACGACACGCTAAACTATTTT
TCCAAAGATCCTGTGCATAGAAAATATCATCAACAAGATATAACGTTTAGGATGCTTTATGCTTTTAACGAAAACTTCAT
ATTACCGCTCTCTCACGATGAGGTGGTGCATGGAAAAGGTTCTTTGATAGGAAAAATGCCCGGTGATTACTGGCAAAAAT
TTGCAAATTTAAGACTTTTACTATCTTATATGTATGGAAGTCCTGGTAAAAAGCTTCTTTTTATGGGTAGTGAGTTTGGC
CAATTTGACGAGTGGAACCACGATAAAAGCTTGGACTGGCATCTTTTAGAGTTTGATTCGCATAAAGGTATACAAAATTT
GGTAAAAGATTTAAACAGACTTTATCACCAAGAGGCTGCTCTTTATGAATTAGACCACGATCCAGAAGGTTTTGAATGGA
TTGATTTTCAAGACGTAGAGCAATCTATTTTTTCGTTTTTAAGAAAAGCCAAAAACGGTGATTTCGTAATCTGTATTTTT
AACGCCACTCCTGTCCCAAGACATGATTATAAAATAGGTGTTCCAAAACCAGGTTTTTATAAAGAAATATTAAATTCAGA
CTCTATGTACTATTGGGGTTCTAACGTTGGAAACGCTGGACTCATAGAAGCGCATGCTGAACCTTGGCATAAGTTTAACT
TTTCCATAAGTTTAACGCTTCCACCGTTAGGAGCGCTATTTTTAAAATTAGCTTAA

Upstream 100 bases:

>100_bases
AACAAGCTTGATTATTTAAAAACTATAGTTGAATTTGCTTTACAAAGAGAGGATTTAAAAGACGAGTTTTTTAGCTTTTT
AAAAGATGTAGTAAAAAATA

Downstream 100 bases:

>100_bases
TATTTTATATAGATTTTATATTGATGTTATAAAATATTTCCAATGGGAAATCTTGGTTTTCTTCATTTTGAGGGTTTAGG
AGCCGTTATATTGGTTATTA

Product: 1,4-alpha-glucan branching enzyme

Products: NA

Alternate protein names: 1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase; Glycogen-branching enzyme; BE [H]

Number of amino acids: Translated: 631; Mature: 630

Protein sequence:

>631_residues
MAYYKYNYDISLLTDEDLYLFNEGTHYHLYEKLGAHVLEGGVYFAVWAPNAKEVYVEGSFNFWNKKEYPLRPKGSSGIWE
IFIEGLKSYELYKYYIVSNFGYEVEKRDPFAFYTEVPPKSAGIIYDISGYQWKDDLWLSKRRQSNHYKEPISIYEVHLGS
WRRTLENEFLSYKDIAHQLVEYVKDMGFTHVEFLPIMEHPFYGSWGYQTLSYFAPTSRHGEPKDFMYLVELLHQNDIGVI
LDWVPSHFATDDYGLSFFDGTHLYEHMDKRKGYHPDWGSYIFNYGRHEVRAFLISSANFWFNKYHVDGIRVDAVASMLYL
DYSRKEGEWEPNIYGGKENLEAIDCLRKLNEAVYIFNPGIFTVAEESTAWPMVTKPTYIGGLGFGFKWDMGWMHDTLNYF
SKDPVHRKYHQQDITFRMLYAFNENFILPLSHDEVVHGKGSLIGKMPGDYWQKFANLRLLLSYMYGSPGKKLLFMGSEFG
QFDEWNHDKSLDWHLLEFDSHKGIQNLVKDLNRLYHQEAALYELDHDPEGFEWIDFQDVEQSIFSFLRKAKNGDFVICIF
NATPVPRHDYKIGVPKPGFYKEILNSDSMYYWGSNVGNAGLIEAHAEPWHKFNFSISLTLPPLGALFLKLA

Sequences:

>Translated_631_residues
MAYYKYNYDISLLTDEDLYLFNEGTHYHLYEKLGAHVLEGGVYFAVWAPNAKEVYVEGSFNFWNKKEYPLRPKGSSGIWE
IFIEGLKSYELYKYYIVSNFGYEVEKRDPFAFYTEVPPKSAGIIYDISGYQWKDDLWLSKRRQSNHYKEPISIYEVHLGS
WRRTLENEFLSYKDIAHQLVEYVKDMGFTHVEFLPIMEHPFYGSWGYQTLSYFAPTSRHGEPKDFMYLVELLHQNDIGVI
LDWVPSHFATDDYGLSFFDGTHLYEHMDKRKGYHPDWGSYIFNYGRHEVRAFLISSANFWFNKYHVDGIRVDAVASMLYL
DYSRKEGEWEPNIYGGKENLEAIDCLRKLNEAVYIFNPGIFTVAEESTAWPMVTKPTYIGGLGFGFKWDMGWMHDTLNYF
SKDPVHRKYHQQDITFRMLYAFNENFILPLSHDEVVHGKGSLIGKMPGDYWQKFANLRLLLSYMYGSPGKKLLFMGSEFG
QFDEWNHDKSLDWHLLEFDSHKGIQNLVKDLNRLYHQEAALYELDHDPEGFEWIDFQDVEQSIFSFLRKAKNGDFVICIF
NATPVPRHDYKIGVPKPGFYKEILNSDSMYYWGSNVGNAGLIEAHAEPWHKFNFSISLTLPPLGALFLKLA
>Mature_630_residues
AYYKYNYDISLLTDEDLYLFNEGTHYHLYEKLGAHVLEGGVYFAVWAPNAKEVYVEGSFNFWNKKEYPLRPKGSSGIWEI
FIEGLKSYELYKYYIVSNFGYEVEKRDPFAFYTEVPPKSAGIIYDISGYQWKDDLWLSKRRQSNHYKEPISIYEVHLGSW
RRTLENEFLSYKDIAHQLVEYVKDMGFTHVEFLPIMEHPFYGSWGYQTLSYFAPTSRHGEPKDFMYLVELLHQNDIGVIL
DWVPSHFATDDYGLSFFDGTHLYEHMDKRKGYHPDWGSYIFNYGRHEVRAFLISSANFWFNKYHVDGIRVDAVASMLYLD
YSRKEGEWEPNIYGGKENLEAIDCLRKLNEAVYIFNPGIFTVAEESTAWPMVTKPTYIGGLGFGFKWDMGWMHDTLNYFS
KDPVHRKYHQQDITFRMLYAFNENFILPLSHDEVVHGKGSLIGKMPGDYWQKFANLRLLLSYMYGSPGKKLLFMGSEFGQ
FDEWNHDKSLDWHLLEFDSHKGIQNLVKDLNRLYHQEAALYELDHDPEGFEWIDFQDVEQSIFSFLRKAKNGDFVICIFN
ATPVPRHDYKIGVPKPGFYKEILNSDSMYYWGSNVGNAGLIEAHAEPWHKFNFSISLTLPPLGALFLKLA

Specific function: Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position [H]

COG id: COG0296

COG function: function code G; 1,4-alpha-glucan branching enzyme

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 13 family [H]

Homologues:

Organism=Homo sapiens, GI189458812, Length=612, Percent_Identity=27.7777777777778, Blast_Score=186, Evalue=8e-47,
Organism=Escherichia coli, GI1789839, Length=624, Percent_Identity=52.724358974359, Blast_Score=670, Evalue=0.0,
Organism=Caenorhabditis elegans, GI17554896, Length=608, Percent_Identity=25.1644736842105, Blast_Score=157, Evalue=2e-38,
Organism=Caenorhabditis elegans, GI32564391, Length=534, Percent_Identity=25.6554307116105, Blast_Score=147, Evalue=2e-35,
Organism=Saccharomyces cerevisiae, GI6320826, Length=651, Percent_Identity=25.8064516129032, Blast_Score=166, Evalue=9e-42,
Organism=Drosophila melanogaster, GI28573410, Length=611, Percent_Identity=27.986906710311, Blast_Score=196, Evalue=4e-50,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006407
- InterPro:   IPR006048
- InterPro:   IPR013780
- InterPro:   IPR006047
- InterPro:   IPR004193
- InterPro:   IPR017853
- InterPro:   IPR013781
- InterPro:   IPR013783 [H]

Pfam domain/function: PF00128 Alpha-amylase; PF02806 Alpha-amylase_C; PF02922 CBM_48 [H]

EC number: =2.4.1.18 [H]

Molecular weight: Translated: 74115; Mature: 73984

Theoretical pI: Translated: 5.92; Mature: 5.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAYYKYNYDISLLTDEDLYLFNEGTHYHLYEKLGAHVLEGGVYFAVWAPNAKEVYVEGSF
CCEEEEEEEEEEEECCCEEEEECCCEEEHHHHHCHHEECCCEEEEEECCCCCEEEEECCC
NFWNKKEYPLRPKGSSGIWEIFIEGLKSYELYKYYIVSNFGYEVEKRDPFAFYTEVPPKS
CCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEEEEECCCCEEECCCCEEEEECCCCCC
AGIIYDISGYQWKDDLWLSKRRQSNHYKEPISIYEVHLGSWRRTLENEFLSYKDIAHQLV
CCEEEECCCCEECCHHHHHHHHCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHH
EYVKDMGFTHVEFLPIMEHPFYGSWGYQTLSYFAPTSRHGEPKDFMYLVELLHQNDIGVI
HHHHHCCCCEEEEEEECCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCEEE
LDWVPSHFATDDYGLSFFDGTHLYEHMDKRKGYHPDWGSYIFNYGRHEVRAFLISSANFW
EECCCCCCCCCCCCCEEECCHHHHHHHHHHCCCCCCHHHHHHHCCHHHEEEEEEECCCEE
FNKYHVDGIRVDAVASMLYLDYSRKEGEWEPNIYGGKENLEAIDCLRKLNEAVYIFNPGI
EEEEEECCEEHHHHHHHHHEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCEEEEECCCE
FTVAEESTAWPMVTKPTYIGGLGFGFKWDMGWMHDTLNYFSKDPVHRKYHQQDITFRMLY
EEEECCCCCCCEEECCCEECCCCCCEEECCCHHHHHHHHHCCCCHHHHHHCCCCEEEEEE
AFNENFILPLSHDEVVHGKGSLIGKMPGDYWQKFANLRLLLSYMYGSPGKKLLFMGSEFG
EECCCEEEEECCCCEECCCCCEEECCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCC
QFDEWNHDKSLDWHLLEFDSHKGIQNLVKDLNRLYHQEAALYELDHDPEGFEWIDFQDVE
CCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHEEECCCCCCCCEECCHHHHH
QSIFSFLRKAKNGDFVICIFNATPVPRHDYKIGVPKPGFYKEILNSDSMYYWGSNVGNAG
HHHHHHHHHCCCCCEEEEEECCCCCCCCCEEECCCCCCHHHHHHCCCCEEEECCCCCCCC
LIEAHAEPWHKFNFSISLTLPPLGALFLKLA
EEECCCCCCEEEEEEEEEECCCHHHHHHCCC
>Mature Secondary Structure 
AYYKYNYDISLLTDEDLYLFNEGTHYHLYEKLGAHVLEGGVYFAVWAPNAKEVYVEGSF
CEEEEEEEEEEEECCCEEEEECCCEEEHHHHHCHHEECCCEEEEEECCCCCEEEEECCC
NFWNKKEYPLRPKGSSGIWEIFIEGLKSYELYKYYIVSNFGYEVEKRDPFAFYTEVPPKS
CCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEEEEECCCCEEECCCCEEEEECCCCCC
AGIIYDISGYQWKDDLWLSKRRQSNHYKEPISIYEVHLGSWRRTLENEFLSYKDIAHQLV
CCEEEECCCCEECCHHHHHHHHCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHH
EYVKDMGFTHVEFLPIMEHPFYGSWGYQTLSYFAPTSRHGEPKDFMYLVELLHQNDIGVI
HHHHHCCCCEEEEEEECCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCEEE
LDWVPSHFATDDYGLSFFDGTHLYEHMDKRKGYHPDWGSYIFNYGRHEVRAFLISSANFW
EECCCCCCCCCCCCCEEECCHHHHHHHHHHCCCCCCHHHHHHHCCHHHEEEEEEECCCEE
FNKYHVDGIRVDAVASMLYLDYSRKEGEWEPNIYGGKENLEAIDCLRKLNEAVYIFNPGI
EEEEEECCEEHHHHHHHHHEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCEEEEECCCE
FTVAEESTAWPMVTKPTYIGGLGFGFKWDMGWMHDTLNYFSKDPVHRKYHQQDITFRMLY
EEEECCCCCCCEEECCCEECCCCCCEEECCCHHHHHHHHHCCCCHHHHHHCCCCEEEEEE
AFNENFILPLSHDEVVHGKGSLIGKMPGDYWQKFANLRLLLSYMYGSPGKKLLFMGSEFG
EECCCEEEEECCCCEECCCCCEEECCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCC
QFDEWNHDKSLDWHLLEFDSHKGIQNLVKDLNRLYHQEAALYELDHDPEGFEWIDFQDVE
CCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHEEECCCCCCCCEECCHHHHH
QSIFSFLRKAKNGDFVICIFNATPVPRHDYKIGVPKPGFYKEILNSDSMYYWGSNVGNAG
HHHHHHHHHCCCCCEEEEEECCCCCCCCCEEECCCCCCHHHHHHCCCCEEEECCCCCCCC
LIEAHAEPWHKFNFSISLTLPPLGALFLKLA
EEECCCCCCEEEEEEEEEECCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]