| Definition | Hydrogenobaculum sp. Y04AAS1 chromosome, complete genome. |
|---|---|
| Accession | NC_011126 |
| Length | 1,559,514 |
Click here to switch to the map view.
The map label for this gene is gtaB1 [H]
Identifier: 195952986
GI number: 195952986
Start: 545913
End: 546791
Strand: Direct
Name: gtaB1 [H]
Synonym: HY04AAS1_0611
Alternate gene names: 195952986
Gene position: 545913-546791 (Clockwise)
Preceding gene: 195952983
Following gene: 195952987
Centisome position: 35.01
GC content: 34.13
Gene sequence:
>879_bases ATGGATGTTAGAAAAGCCGTTATACCTTCTGCTGGGTGGGGCACAAGGTTTTTACCAGCTACTAAGGCAATGCCAAAAGA GATGTTTCCAATAATAGATAAGCCAGTTATCCAATTTATTGTAGAAGAGCTCTTGATGAGCAGCATAGAAAATATAATAT TTGTCACTGGAAGGCATAAAAGACCTTTAGAGCACCATTTTGATGTAAATACAGATTTAGAGATTTTTCTCGAGAAAAAC AACAAAAAGGACCTACTTGAAAACATAAAAACAGTTTCTCACCTTATAAATCCAATATATATAAGACAAAAAGAGCAGCT CGGTCTTGGACATGCTGTCTTAACAGCTGAGCCCGTAGTAGGTGCAGAGCCTTTCGTTGTCTCTCTCGGTGATATAGTAA TTCAGACAGATGTAAACATCATCTCAGAGATGAAAAATCTTTACAAAAAATTTGGGAAAAGTATAGTAGCAGTTTATGAA GTTCCAAGAGAAGAAGTGTATAAATACGGTATAGTATCTGGAAAAGAAATAGAAGATGATATATTTCTAATAGAAAATAT GGTAGAAAAACCAGACGTAGAAACAGCTCCTTCGAATCTGGCTATTTTGGGAAGGTATCTTTTTACACCTACTATTTTTG AAAAGCTTAAAAACACAAAACCAGGCAAAGGTGGAGAAATACAGCTCACAGATGCTATGAAGATGCTTTTAGAAGATGAG GCAGTTTACGCTTACAAAGTTAAAGCAAGGGTATATGACACAGGGAACAAGCTTGATTATTTAAAAACTATAGTTGAATT TGCTTTACAAAGAGAGGATTTAAAAGACGAGTTTTTTAGCTTTTTAAAAGATGTAGTAAAAAATAATGGCTTATTATAA
Upstream 100 bases:
>100_bases AAGGTGAGTAGCTCAGTGGGAGAGCGACGCCCTTACAAGGCGTAGGTCGCAGGTTCGACCCCTGTCTCACCTATTTTAAA CAAAACTAGGGGACAAACAT
Downstream 100 bases:
>100_bases ATACAATTACGATATAAGCCTTTTAACCGATGAAGATTTGTATCTTTTTAACGAAGGAACGCATTATCATCTTTATGAAA AGCTTGGAGCTCATGTACTT
Product: UTP-glucose-1-phosphate uridylyltransferase
Products: NA
Alternate protein names: Alpha-D-glucosyl-1-phosphate uridylyltransferase 1; UDP-glucose pyrophosphorylase 1; UDPGP 1; Uridine diphosphoglucose pyrophosphorylase 1 [H]
Number of amino acids: Translated: 292; Mature: 292
Protein sequence:
>292_residues MDVRKAVIPSAGWGTRFLPATKAMPKEMFPIIDKPVIQFIVEELLMSSIENIIFVTGRHKRPLEHHFDVNTDLEIFLEKN NKKDLLENIKTVSHLINPIYIRQKEQLGLGHAVLTAEPVVGAEPFVVSLGDIVIQTDVNIISEMKNLYKKFGKSIVAVYE VPREEVYKYGIVSGKEIEDDIFLIENMVEKPDVETAPSNLAILGRYLFTPTIFEKLKNTKPGKGGEIQLTDAMKMLLEDE AVYAYKVKARVYDTGNKLDYLKTIVEFALQREDLKDEFFSFLKDVVKNNGLL
Sequences:
>Translated_292_residues MDVRKAVIPSAGWGTRFLPATKAMPKEMFPIIDKPVIQFIVEELLMSSIENIIFVTGRHKRPLEHHFDVNTDLEIFLEKN NKKDLLENIKTVSHLINPIYIRQKEQLGLGHAVLTAEPVVGAEPFVVSLGDIVIQTDVNIISEMKNLYKKFGKSIVAVYE VPREEVYKYGIVSGKEIEDDIFLIENMVEKPDVETAPSNLAILGRYLFTPTIFEKLKNTKPGKGGEIQLTDAMKMLLEDE AVYAYKVKARVYDTGNKLDYLKTIVEFALQREDLKDEFFSFLKDVVKNNGLL >Mature_292_residues MDVRKAVIPSAGWGTRFLPATKAMPKEMFPIIDKPVIQFIVEELLMSSIENIIFVTGRHKRPLEHHFDVNTDLEIFLEKN NKKDLLENIKTVSHLINPIYIRQKEQLGLGHAVLTAEPVVGAEPFVVSLGDIVIQTDVNIISEMKNLYKKFGKSIVAVYE VPREEVYKYGIVSGKEIEDDIFLIENMVEKPDVETAPSNLAILGRYLFTPTIFEKLKNTKPGKGGEIQLTDAMKMLLEDE AVYAYKVKARVYDTGNKLDYLKTIVEFALQREDLKDEFFSFLKDVVKNNGLL
Specific function: Catalyzes the formation of UDP-glucose from glucose-1- phosphate and UTP. This is an intermediate step in the biosynthesis of diglucosyl-diacylglycerol (Glc2-DAG), i.e. a glycolipid found in the membrane, which is also used as a membrane anchor for lipote
COG id: COG1210
COG function: function code M; UDP-glucose pyrophosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UDPGP type 2 family [H]
Homologues:
Organism=Escherichia coli, GI1787488, Length=292, Percent_Identity=43.1506849315069, Blast_Score=233, Evalue=2e-62, Organism=Escherichia coli, GI1788355, Length=277, Percent_Identity=38.2671480144404, Blast_Score=188, Evalue=4e-49, Organism=Escherichia coli, GI1790224, Length=298, Percent_Identity=25.1677852348993, Blast_Score=75, Evalue=6e-15,
Paralogues:
None
Copy number: 120 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 260 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005771 - InterPro: IPR005835 [H]
Pfam domain/function: PF00483 NTP_transferase [H]
EC number: =2.7.7.9 [H]
Molecular weight: Translated: 33236; Mature: 33236
Theoretical pI: Translated: 5.50; Mature: 5.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDVRKAVIPSAGWGTRFLPATKAMPKEMFPIIDKPVIQFIVEELLMSSIENIIFVTGRHK CCCCHHHCCCCCCCCCCCCHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHEEEEECCCC RPLEHHFDVNTDLEIFLEKNNKKDLLENIKTVSHLINPIYIRQKEQLGLGHAVLTAEPVV CCHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCHHHEECHHHCCCCEEEEEECCCC GAEPFVVSLGDIVIQTDVNIISEMKNLYKKFGKSIVAVYEVPREEVYKYGIVSGKEIEDD CCCCCEEECCCEEEECCHHHHHHHHHHHHHHCHHEEHHHHCCHHHHHHHCCCCCCCCCHH IFLIENMVEKPDVETAPSNLAILGRYLFTPTIFEKLKNTKPGKGGEIQLTDAMKMLLEDE HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHCC AVYAYKVKARVYDTGNKLDYLKTIVEFALQREDLKDEFFSFLKDVVKNNGLL CEEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MDVRKAVIPSAGWGTRFLPATKAMPKEMFPIIDKPVIQFIVEELLMSSIENIIFVTGRHK CCCCHHHCCCCCCCCCCCCHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHEEEEECCCC RPLEHHFDVNTDLEIFLEKNNKKDLLENIKTVSHLINPIYIRQKEQLGLGHAVLTAEPVV CCHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCHHHEECHHHCCCCEEEEEECCCC GAEPFVVSLGDIVIQTDVNIISEMKNLYKKFGKSIVAVYEVPREEVYKYGIVSGKEIEDD CCCCCEEECCCEEEECCHHHHHHHHHHHHHHCHHEEHHHHCCHHHHHHHCCCCCCCCCHH IFLIENMVEKPDVETAPSNLAILGRYLFTPTIFEKLKNTKPGKGGEIQLTDAMKMLLEDE HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHCC AVYAYKVKARVYDTGNKLDYLKTIVEFALQREDLKDEFFSFLKDVVKNNGLL CEEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA