Definition Hydrogenobaculum sp. Y04AAS1 chromosome, complete genome.
Accession NC_011126
Length 1,559,514

Click here to switch to the map view.

The map label for this gene is 195952975

Identifier: 195952975

GI number: 195952975

Start: 535698

End: 536558

Strand: Direct

Name: 195952975

Synonym: HY04AAS1_0600

Alternate gene names: NA

Gene position: 535698-536558 (Clockwise)

Preceding gene: 195952974

Following gene: 195952983

Centisome position: 34.35

GC content: 38.91

Gene sequence:

>861_bases
ATGGAAGAGGTTTTGGACGTAGCTACAAATGCTTTGACAGACTCAATGGTGGAAAGGCTTGCAAACAGTGTATCCACCAT
AGCAGAGTTATCTGATGCAATAGCCTCTTCTAAACTCCTTAATACAATAGATAAGCTATCCAAAAACGCTGAAACCTTAG
AATCTTCTTTGGATGCCGTATTTGGGCTTTTGTCGGCTATAAATGCAATGAACAACGCTTTTACCGATTCTATGTTAGAA
AGGCTTACAGTTAGCTTGTCAAAAATCGTGGAGCTTACCGATTATATATCAAACTCTCAGCTTATGGAGGTTATAGAAAA
AATAGCTAAAAACGCAGATGCCCTAAATAAATCTATAGACGCCATAATAAGCTTTTCCAACACTTTGGCGGTGATTGATA
ACGCTTTTACCGATTCTATGTTAGAAAGGCTTGTTTCTTTTATGGCAGAACTGGGTGAGCTCACAGACGAGGTTAGAAGT
GCCGAGCTAAAAACTATGATTCCTATGCTTACTACTTTGGCTAAAGATGGTGGTATGGAAGCTCTTGTAGATACTGCAAA
AGCACTCGTTGCCGTAAGAAATGCCCTTTCTGACTCCATGCTAGAAAGGGTGGCATCTGTTGTAGTTGACACTATAGACT
ATTTTGCCTCTTTAAGAGCCCAAAGTATAGGAAGCTATCTACTGGAATCTGTAAACAAAACCACTAAGGAGTTTTCCGAA
AAAGAACAAAAACCAAGTTTATTTGGTTTATTGAAAGAGCTTAAAGATCCTCAGACACTTCAAAGCATTATGTTTGTGTT
AGCTCTTATAAAAAATATGCCGCAAGGGCTTGCCAAAGCAACAGGTTGTCAGACATGCTAA

Upstream 100 bases:

>100_bases
CAAGTCCTATGCCACCATCCAAAATGATACACTGGTTGAAGTTAGGATATAACCGTATGTATTGGTTAACTGCAAGAGGT
GTCTTGTAAGGAGGGATTTT

Downstream 100 bases:

>100_bases
ATTGAAAGCCGTCCCATACATGGGACGGTGAAAATGATTTTAAGAGTTATTTCAAGAGTTTAAGGCTTCGTAGACTTTAC
CCACCAAAGCTTCCGATGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 286; Mature: 286

Protein sequence:

>286_residues
MEEVLDVATNALTDSMVERLANSVSTIAELSDAIASSKLLNTIDKLSKNAETLESSLDAVFGLLSAINAMNNAFTDSMLE
RLTVSLSKIVELTDYISNSQLMEVIEKIAKNADALNKSIDAIISFSNTLAVIDNAFTDSMLERLVSFMAELGELTDEVRS
AELKTMIPMLTTLAKDGGMEALVDTAKALVAVRNALSDSMLERVASVVVDTIDYFASLRAQSIGSYLLESVNKTTKEFSE
KEQKPSLFGLLKELKDPQTLQSIMFVLALIKNMPQGLAKATGCQTC

Sequences:

>Translated_286_residues
MEEVLDVATNALTDSMVERLANSVSTIAELSDAIASSKLLNTIDKLSKNAETLESSLDAVFGLLSAINAMNNAFTDSMLE
RLTVSLSKIVELTDYISNSQLMEVIEKIAKNADALNKSIDAIISFSNTLAVIDNAFTDSMLERLVSFMAELGELTDEVRS
AELKTMIPMLTTLAKDGGMEALVDTAKALVAVRNALSDSMLERVASVVVDTIDYFASLRAQSIGSYLLESVNKTTKEFSE
KEQKPSLFGLLKELKDPQTLQSIMFVLALIKNMPQGLAKATGCQTC
>Mature_286_residues
MEEVLDVATNALTDSMVERLANSVSTIAELSDAIASSKLLNTIDKLSKNAETLESSLDAVFGLLSAINAMNNAFTDSMLE
RLTVSLSKIVELTDYISNSQLMEVIEKIAKNADALNKSIDAIISFSNTLAVIDNAFTDSMLERLVSFMAELGELTDEVRS
AELKTMIPMLTTLAKDGGMEALVDTAKALVAVRNALSDSMLERVASVVVDTIDYFASLRAQSIGSYLLESVNKTTKEFSE
KEQKPSLFGLLKELKDPQTLQSIMFVLALIKNMPQGLAKATGCQTC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30969; Mature: 30969

Theoretical pI: Translated: 4.24; Mature: 4.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEEVLDVATNALTDSMVERLANSVSTIAELSDAIASSKLLNTIDKLSKNAETLESSLDAV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FGLLSAINAMNNAFTDSMLERLTVSLSKIVELTDYISNSQLMEVIEKIAKNADALNKSID
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
AIISFSNTLAVIDNAFTDSMLERLVSFMAELGELTDEVRSAELKTMIPMLTTLAKDGGME
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
ALVDTAKALVAVRNALSDSMLERVASVVVDTIDYFASLRAQSIGSYLLESVNKTTKEFSE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KEQKPSLFGLLKELKDPQTLQSIMFVLALIKNMPQGLAKATGCQTC
HHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MEEVLDVATNALTDSMVERLANSVSTIAELSDAIASSKLLNTIDKLSKNAETLESSLDAV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FGLLSAINAMNNAFTDSMLERLTVSLSKIVELTDYISNSQLMEVIEKIAKNADALNKSID
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
AIISFSNTLAVIDNAFTDSMLERLVSFMAELGELTDEVRSAELKTMIPMLTTLAKDGGME
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
ALVDTAKALVAVRNALSDSMLERVASVVVDTIDYFASLRAQSIGSYLLESVNKTTKEFSE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KEQKPSLFGLLKELKDPQTLQSIMFVLALIKNMPQGLAKATGCQTC
HHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA