| Definition | Hydrogenobaculum sp. Y04AAS1 chromosome, complete genome. |
|---|---|
| Accession | NC_011126 |
| Length | 1,559,514 |
Click here to switch to the map view.
The map label for this gene is 195952954
Identifier: 195952954
GI number: 195952954
Start: 517063
End: 517794
Strand: Direct
Name: 195952954
Synonym: HY04AAS1_0579
Alternate gene names: NA
Gene position: 517063-517794 (Clockwise)
Preceding gene: 195952953
Following gene: 195952955
Centisome position: 33.16
GC content: 30.6
Gene sequence:
>732_bases ATGGAAAAAGCTATTGAAAAATCTGTAGAATATGTGATGTCTAAGCTGTGTAGCGATGGCGGGTATTCGTTTTATAGGCA TATATATTTGGAAGAATCAAACATTTACGATACTTACTATGCCATAAGAACGCTCATAATGTTTGGTAAAAGTATATCTG ATAAAACTATCCGATATATCCTAAACTCATTTTTAGAGGCTGATACACTTGAAAAATATTATTATTCTATTAGATGTATT GAGCTTTTAAAAGAAGATCCTAGAACATATAGAAAAGACGTTGAGCTACGCTTTGAGATATCCACTAAACAATTAGAAGA TATAAACTTAGAACTTTTAAGGATACTGATGTTTAAAAGGATATCAGCATACTACGATATAGGATACTCTGAAGAAAAAA CCAAGCATTTTATAAGCTCTATAGATAAATCAGATATAAAAACGGTTTCTTTAATATATGCAATAACAAGTAATTTGGAA AAAGATATAGACCCTTATTTTGACAAGGATTTAGGCATAGTGCCAATCCCTAACTTAAAATATACAAACATTTCAACTCT TTATGCAGGTTATTGGCTTTTAAAAGCTCTAAACAGAGAATTAAAGTACATTTCAAAAGCAAAAGAGTTTGTACTTATGA CCCAGGACAAATACGGTGCTTTTTCAGAAACCAAAGAAGCACTACCAGATTTAAGATCAAACTACTGCGGTATTTTCATA TTGAACCTATGA
Upstream 100 bases:
>100_bases TAGGTTTTGACCAAAAAGATGTGTCCAATTTTTTCTCTGGTACGTTTCCAATAAATATTTCTGAAGCTTTCGCAATTAAT ATATGGAGGGGTATATAAAG
Downstream 100 bases:
>100_bases ATAAAGAAATATAGAAAGTAGAATGATGATAATAAATATTTTAGGCAAAAGACGAGTGCAAAAATTTTTGATAGGCTCAA GTGAGGCTTTATCTTGTGTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 243; Mature: 243
Protein sequence:
>243_residues MEKAIEKSVEYVMSKLCSDGGYSFYRHIYLEESNIYDTYYAIRTLIMFGKSISDKTIRYILNSFLEADTLEKYYYSIRCI ELLKEDPRTYRKDVELRFEISTKQLEDINLELLRILMFKRISAYYDIGYSEEKTKHFISSIDKSDIKTVSLIYAITSNLE KDIDPYFDKDLGIVPIPNLKYTNISTLYAGYWLLKALNRELKYISKAKEFVLMTQDKYGAFSETKEALPDLRSNYCGIFI LNL
Sequences:
>Translated_243_residues MEKAIEKSVEYVMSKLCSDGGYSFYRHIYLEESNIYDTYYAIRTLIMFGKSISDKTIRYILNSFLEADTLEKYYYSIRCI ELLKEDPRTYRKDVELRFEISTKQLEDINLELLRILMFKRISAYYDIGYSEEKTKHFISSIDKSDIKTVSLIYAITSNLE KDIDPYFDKDLGIVPIPNLKYTNISTLYAGYWLLKALNRELKYISKAKEFVLMTQDKYGAFSETKEALPDLRSNYCGIFI LNL >Mature_243_residues MEKAIEKSVEYVMSKLCSDGGYSFYRHIYLEESNIYDTYYAIRTLIMFGKSISDKTIRYILNSFLEADTLEKYYYSIRCI ELLKEDPRTYRKDVELRFEISTKQLEDINLELLRILMFKRISAYYDIGYSEEKTKHFISSIDKSDIKTVSLIYAITSNLE KDIDPYFDKDLGIVPIPNLKYTNISTLYAGYWLLKALNRELKYISKAKEFVLMTQDKYGAFSETKEALPDLRSNYCGIFI LNL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28656; Mature: 28656
Theoretical pI: Translated: 5.94; Mature: 5.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKAIEKSVEYVMSKLCSDGGYSFYRHIYLEESNIYDTYYAIRTLIMFGKSISDKTIRYI CCHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHCCCCCHHHHHHH LNSFLEADTLEKYYYSIRCIELLKEDPRTYRKDVELRFEISTKQLEDINLELLRILMFKR HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCEEEEEECHHHHHHHHHHHHHHHHHHH ISAYYDIGYSEEKTKHFISSIDKSDIKTVSLIYAITSNLEKDIDPYFDKDLGIVPIPNLK HHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCEEECCCCC YTNISTLYAGYWLLKALNRELKYISKAKEFVLMTQDKYGAFSETKEALPDLRSNYCGIFI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHCCCCEEEE LNL EEC >Mature Secondary Structure MEKAIEKSVEYVMSKLCSDGGYSFYRHIYLEESNIYDTYYAIRTLIMFGKSISDKTIRYI CCHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHCCCCCHHHHHHH LNSFLEADTLEKYYYSIRCIELLKEDPRTYRKDVELRFEISTKQLEDINLELLRILMFKR HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCEEEEEECHHHHHHHHHHHHHHHHHHH ISAYYDIGYSEEKTKHFISSIDKSDIKTVSLIYAITSNLEKDIDPYFDKDLGIVPIPNLK HHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCEEECCCCC YTNISTLYAGYWLLKALNRELKYISKAKEFVLMTQDKYGAFSETKEALPDLRSNYCGIFI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHCCCCEEEE LNL EEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA