| Definition | Hydrogenobaculum sp. Y04AAS1 chromosome, complete genome. |
|---|---|
| Accession | NC_011126 |
| Length | 1,559,514 |
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The map label for this gene is ahcY [H]
Identifier: 195952899
GI number: 195952899
Start: 461062
End: 462327
Strand: Direct
Name: ahcY [H]
Synonym: HY04AAS1_0524
Alternate gene names: 195952899
Gene position: 461062-462327 (Clockwise)
Preceding gene: 195952898
Following gene: 195952900
Centisome position: 29.56
GC content: 36.41
Gene sequence:
>1266_bases TTGAATTACGATATAAAAGATATTAATTTGGCTAAGCAAGGAAAAGATAGAATTGAATGGGCTGGTATTGATATGCCTGT ATTAAAATCTATAAGAGAAGAGTTTGCTAAGACAAAACCTTTTCACGGCATAACCATAGGAGCTTGTCTTCATGTAACTA CAGAAACAGCAAATCTTATGATAACATTAAAAGAAGGGGGAGCAAACGTATATCTTTGTGCTTCAAACCCGCTTTCAACT CAAGACGATGTAGCCGCTTCATTGGTAAAAGATTATGACATACCTGTATTTGCAATAAAGGGCGAGGATAACAATACATT TTATAAGCATTTAAGAAGCATCCTAGATAAAAATCCAAATATATTGATAGACGATGGAGCTGATTTGATTTCTACTGCTC ACAAAGAATACGAAGAGCTAACCAAAAAGATTTTTGGAGCAATGGAAGAAACAACTACAGGTGTTATAAGGCTAAAAGCT ATGGCAAAAGATAAGGCTCTTAAATTTCCAGTTATAGCAGTAAATGATGCTCTTACCAAGCATATGTTTGATAACAGATA TGGCACAGGACAATCTACGCTAGATGGTATATTAAGAGCTACAAATCGTCTCATAGCAGGTTCTACTTTTGTAGTAGCAG GCTACGGCTGGTGCGGTAAAGGTGTAGCTATGAGAGCAAGAGGCATGGGCGCTAATGTTATAGTTACAGAAGTAGACCCT TTAAAAGCGTTAGAAGCTAGGATGGATGGTTTTTTGGTTATGCCAATGGAAAAAGCAGCTCCATTGGGAGATATATTTGT AACCGTAACAGGAAATACAAAAGTGATAAGGCAAGAGCATTTTGAAGTAATAAAAAACGGAGCTATCGTATCAAACTCAG GACATTTTGACGTAGAGATAGATGTCAGATATTTAGAAAGCGTTGCATTAGAAATAAACGAAAGAAGGCCTATGGTTAAA GAATATATTATCAATACTAAAAGCGGTAAAAAACGTATATACGTGTTGGCAGAAGGAAGGCTTGTAAACTTAGCGGCAGC AGAAGGTCATCCAGCTTCTGTTATGGATATGTCTTTTGCCAATCAAGCACTATCAGCAGAATTTATTTTAAATAATCATA GCAAATTAGAAAAAGATGTGTATAAAGTGCCAGACGACATAGACCAAAAAGTAGCTAAACTAAAGCTTGATTCCATGGGC ATAGAGATTGACATACTCACACCAGAACAGATAGCTTATATGTCCTCTTGGGAACATGGCACATAA
Upstream 100 bases:
>100_bases ACAGAATTATTACAGACAAAATATAATGTTGTAGAGGTATCTTGTCAAGCTCAAGGACATGAAAAATGCACCTTCAAAAT AAAAAAGGAGGCCAAATAAT
Downstream 100 bases:
>100_bases TCTCTAATGATTAAAACCCTTGACTTGCTTAAGATTTAAGTTATTATCTAATACATGGAAAAAAAATTAAAAAAACTTAA AGATGCTTTGGGCGATAAAA
Product: S-adenosyl-L-homocysteine hydrolase
Products: NA
Alternate protein names: S-adenosyl-L-homocysteine hydrolase; AdoHcyase [H]
Number of amino acids: Translated: 421; Mature: 421
Protein sequence:
>421_residues MNYDIKDINLAKQGKDRIEWAGIDMPVLKSIREEFAKTKPFHGITIGACLHVTTETANLMITLKEGGANVYLCASNPLST QDDVAASLVKDYDIPVFAIKGEDNNTFYKHLRSILDKNPNILIDDGADLISTAHKEYEELTKKIFGAMEETTTGVIRLKA MAKDKALKFPVIAVNDALTKHMFDNRYGTGQSTLDGILRATNRLIAGSTFVVAGYGWCGKGVAMRARGMGANVIVTEVDP LKALEARMDGFLVMPMEKAAPLGDIFVTVTGNTKVIRQEHFEVIKNGAIVSNSGHFDVEIDVRYLESVALEINERRPMVK EYIINTKSGKKRIYVLAEGRLVNLAAAEGHPASVMDMSFANQALSAEFILNNHSKLEKDVYKVPDDIDQKVAKLKLDSMG IEIDILTPEQIAYMSSWEHGT
Sequences:
>Translated_421_residues MNYDIKDINLAKQGKDRIEWAGIDMPVLKSIREEFAKTKPFHGITIGACLHVTTETANLMITLKEGGANVYLCASNPLST QDDVAASLVKDYDIPVFAIKGEDNNTFYKHLRSILDKNPNILIDDGADLISTAHKEYEELTKKIFGAMEETTTGVIRLKA MAKDKALKFPVIAVNDALTKHMFDNRYGTGQSTLDGILRATNRLIAGSTFVVAGYGWCGKGVAMRARGMGANVIVTEVDP LKALEARMDGFLVMPMEKAAPLGDIFVTVTGNTKVIRQEHFEVIKNGAIVSNSGHFDVEIDVRYLESVALEINERRPMVK EYIINTKSGKKRIYVLAEGRLVNLAAAEGHPASVMDMSFANQALSAEFILNNHSKLEKDVYKVPDDIDQKVAKLKLDSMG IEIDILTPEQIAYMSSWEHGT >Mature_421_residues MNYDIKDINLAKQGKDRIEWAGIDMPVLKSIREEFAKTKPFHGITIGACLHVTTETANLMITLKEGGANVYLCASNPLST QDDVAASLVKDYDIPVFAIKGEDNNTFYKHLRSILDKNPNILIDDGADLISTAHKEYEELTKKIFGAMEETTTGVIRLKA MAKDKALKFPVIAVNDALTKHMFDNRYGTGQSTLDGILRATNRLIAGSTFVVAGYGWCGKGVAMRARGMGANVIVTEVDP LKALEARMDGFLVMPMEKAAPLGDIFVTVTGNTKVIRQEHFEVIKNGAIVSNSGHFDVEIDVRYLESVALEINERRPMVK EYIINTKSGKKRIYVLAEGRLVNLAAAEGHPASVMDMSFANQALSAEFILNNHSKLEKDVYKVPDDIDQKVAKLKLDSMG IEIDILTPEQIAYMSSWEHGT
Specific function: May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine [H]
COG id: COG0499
COG function: function code H; S-adenosylhomocysteine hydrolase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the adenosylhomocysteinase family [H]
Homologues:
Organism=Homo sapiens, GI9951915, Length=418, Percent_Identity=43.7799043062201, Blast_Score=312, Evalue=3e-85, Organism=Homo sapiens, GI239937451, Length=394, Percent_Identity=44.6700507614213, Blast_Score=301, Evalue=7e-82, Organism=Homo sapiens, GI195539349, Length=417, Percent_Identity=38.3693045563549, Blast_Score=269, Evalue=4e-72, Organism=Homo sapiens, GI298286489, Length=417, Percent_Identity=38.3693045563549, Blast_Score=268, Evalue=5e-72, Organism=Homo sapiens, GI195539337, Length=417, Percent_Identity=38.3693045563549, Blast_Score=268, Evalue=1e-71, Organism=Homo sapiens, GI24308043, Length=417, Percent_Identity=38.3693045563549, Blast_Score=267, Evalue=1e-71, Organism=Homo sapiens, GI21361647, Length=417, Percent_Identity=37.8896882494005, Blast_Score=250, Evalue=2e-66, Organism=Caenorhabditis elegans, GI17506425, Length=421, Percent_Identity=41.5676959619952, Blast_Score=304, Evalue=5e-83, Organism=Saccharomyces cerevisiae, GI6320882, Length=438, Percent_Identity=42.4657534246575, Blast_Score=313, Evalue=3e-86, Organism=Drosophila melanogaster, GI24642172, Length=423, Percent_Identity=42.5531914893617, Blast_Score=308, Evalue=6e-84, Organism=Drosophila melanogaster, GI24656245, Length=405, Percent_Identity=38.5185185185185, Blast_Score=249, Evalue=2e-66, Organism=Drosophila melanogaster, GI45553385, Length=416, Percent_Identity=37.7403846153846, Blast_Score=234, Evalue=9e-62, Organism=Drosophila melanogaster, GI45553387, Length=416, Percent_Identity=37.7403846153846, Blast_Score=234, Evalue=9e-62,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000043 - InterPro: IPR015878 - InterPro: IPR020082 [H]
Pfam domain/function: PF05221 AdoHcyase; PF00670 AdoHcyase_NAD [H]
EC number: =3.3.1.1 [H]
Molecular weight: Translated: 46473; Mature: 46473
Theoretical pI: Translated: 6.20; Mature: 6.20
Prosite motif: PS00738 ADOHCYASE_1 ; PS00739 ADOHCYASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNYDIKDINLAKQGKDRIEWAGIDMPVLKSIREEFAKTKPFHGITIGACLHVTTETANLM CCCCCCCCCHHHCCCCCEEEECCCHHHHHHHHHHHHHCCCCCCEEEEEEEEEEECCCEEE ITLKEGGANVYLCASNPLSTQDDVAASLVKDYDIPVFAIKGEDNNTFYKHLRSILDKNPN EEEECCCCEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCCC ILIDDGADLISTAHKEYEELTKKIFGAMEETTTGVIRLKAMAKDKALKFPVIAVNDALTK EEEECCHHHHHHHHHHHHHHHHHHHCCHHHCCCEEEEEEEECCCCCEECCEEEECHHHHH HMFDNRYGTGQSTLDGILRATNRLIAGSTFVVAGYGWCGKGVAMRARGMGANVIVTEVDP HHHCCCCCCCHHHHHHHHHHHHHEEECCEEEEEECCCCCCCCEEEECCCCCEEEEECCCH LKALEARMDGFLVMPMEKAAPLGDIFVTVTGNTKVIRQEHFEVIKNGAIVSNSGHFDVEI HHHHHHHCCCEEEEEHHHCCCCCEEEEEEECCCEEHHHHHHHHHHCCEEEECCCCEEEEE DVRYLESVALEINERRPMVKEYIINTKSGKKRIYVLAEGRLVNLAAAEGHPASVMDMSFA EHHHHHHHHHHHHCCCCHHHHHHEECCCCCEEEEEEECCEEEEEEECCCCCCCEEEHHHH NQALSAEFILNNHSKLEKDVYKVPDDIDQKVAKLKLDSMGIEIDILTPEQIAYMSSWEHG HHHHEEEEEECCCHHHHHHHHCCCCHHHHHHHHEEHHHCCEEEEEECHHHHHHHCCCCCC T C >Mature Secondary Structure MNYDIKDINLAKQGKDRIEWAGIDMPVLKSIREEFAKTKPFHGITIGACLHVTTETANLM CCCCCCCCCHHHCCCCCEEEECCCHHHHHHHHHHHHHCCCCCCEEEEEEEEEEECCCEEE ITLKEGGANVYLCASNPLSTQDDVAASLVKDYDIPVFAIKGEDNNTFYKHLRSILDKNPN EEEECCCCEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCCC ILIDDGADLISTAHKEYEELTKKIFGAMEETTTGVIRLKAMAKDKALKFPVIAVNDALTK EEEECCHHHHHHHHHHHHHHHHHHHCCHHHCCCEEEEEEEECCCCCEECCEEEECHHHHH HMFDNRYGTGQSTLDGILRATNRLIAGSTFVVAGYGWCGKGVAMRARGMGANVIVTEVDP HHHCCCCCCCHHHHHHHHHHHHHEEECCEEEEEECCCCCCCCEEEECCCCCEEEEECCCH LKALEARMDGFLVMPMEKAAPLGDIFVTVTGNTKVIRQEHFEVIKNGAIVSNSGHFDVEI HHHHHHHCCCEEEEEHHHCCCCCEEEEEEECCCEEHHHHHHHHHHCCEEEECCCCEEEEE DVRYLESVALEINERRPMVKEYIINTKSGKKRIYVLAEGRLVNLAAAEGHPASVMDMSFA EHHHHHHHHHHHHCCCCHHHHHHEECCCCCEEEEEEECCEEEEEEECCCCCCCEEEHHHH NQALSAEFILNNHSKLEKDVYKVPDDIDQKVAKLKLDSMGIEIDILTPEQIAYMSSWEHG HHHHEEEEEECCCHHHHHHHHCCCCHHHHHHHHEEHHHCCEEEEEECHHHHHHHCCCCCC T C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9537320 [H]