| Definition | Hydrogenobaculum sp. Y04AAS1 chromosome, complete genome. |
|---|---|
| Accession | NC_011126 |
| Length | 1,559,514 |
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The map label for this gene is acpS
Identifier: 195952896
GI number: 195952896
Start: 458914
End: 459288
Strand: Direct
Name: acpS
Synonym: HY04AAS1_0521
Alternate gene names: 195952896
Gene position: 458914-459288 (Clockwise)
Preceding gene: 195952895
Following gene: 195952897
Centisome position: 29.43
GC content: 29.33
Gene sequence:
>375_bases TTGTTAGGTATAGATATTATAAAAAATATAAGGATAGCTAAAGCCCTAGAAAGGTTTGGTTATCATTTTTTAAATAGGGT ATATACAGAGTACGAAATAAATTTATGCAAAATGAACGTTGAGTGTCTATCTGGTAGATTTGCTGCAAAAGAAGCTTCTA TAAAAGCTTTCTCATTTTTATCCATTAGACGTTTTAGTTTTAGAGATTTTGAGGTAGTAAAATCTAAAAACGGAATACCG GAGTTAAGGATTAAAGATGCCTATATAAACGATTTTCTAAAAGCTCAAAAATTAAAACCTTTTATATCCATATCTCATGA GAAGGAGTTTTCTGTAGCAGTTTGTTATATCACAAAAGAGGAGAGAATATGCTAA
Upstream 100 bases:
>100_bases AACTTCTCATATTGTTTATGGCTATAAATCAAATACAATCTGCTTTTACAAATTGGTGTCCAGCCATTACAATGCTTAAA AATCTAGGGTTAAAAGAGGA
Downstream 100 bases:
>100_bases AAGATTACAACAAGTATTTAGATTACAAAGAAGATAAGTTATTTTTAGAAAATGTGGATTTAGAAGAGCTGGCTAAAGAA TTTGGGACACCTCTTTATGT
Product: holo-acyl-carrier-protein synthase
Products: NA
Alternate protein names: Holo-ACP synthase; 4'-phosphopantetheinyl transferase AcpS
Number of amino acids: Translated: 124; Mature: 124
Protein sequence:
>124_residues MLGIDIIKNIRIAKALERFGYHFLNRVYTEYEINLCKMNVECLSGRFAAKEASIKAFSFLSIRRFSFRDFEVVKSKNGIP ELRIKDAYINDFLKAQKLKPFISISHEKEFSVAVCYITKEERIC
Sequences:
>Translated_124_residues MLGIDIIKNIRIAKALERFGYHFLNRVYTEYEINLCKMNVECLSGRFAAKEASIKAFSFLSIRRFSFRDFEVVKSKNGIP ELRIKDAYINDFLKAQKLKPFISISHEKEFSVAVCYITKEERIC >Mature_124_residues MLGIDIIKNIRIAKALERFGYHFLNRVYTEYEINLCKMNVECLSGRFAAKEASIKAFSFLSIRRFSFRDFEVVKSKNGIP ELRIKDAYINDFLKAQKLKPFISISHEKEFSVAVCYITKEERIC
Specific function: Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
COG id: COG0736
COG function: function code I; Phosphopantetheinyl transferase (holo-ACP synthase)
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the P-Pant transferase superfamily. AcpS family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ACPS_HYDS0 (B4U7U7)
Other databases:
- EMBL: CP001130 - RefSeq: YP_002121186.1 - ProteinModelPortal: B4U7U7 - SMR: B4U7U7 - GeneID: 6743317 - GenomeReviews: CP001130_GR - KEGG: hya:HY04AAS1_0521 - HOGENOM: HBG734479 - GO: GO:0005737 - HAMAP: MF_00101 - InterPro: IPR008278 - InterPro: IPR002582 - InterPro: IPR004568 - ProDom: PD004282 - TIGRFAMs: TIGR00516 - TIGRFAMs: TIGR00556
Pfam domain/function: PF01648 ACPS; SSF56214 4-PPT_transf
EC number: =2.7.8.7
Molecular weight: Translated: 14526; Mature: 14526
Theoretical pI: Translated: 9.68; Mature: 9.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLGIDIIKNIRIAKALERFGYHFLNRVYTEYEINLCKMNVECLSGRFAAKEASIKAFSFL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEHHHHCCCCCCCCCCHHHHHHH SIRRFSFRDFEVVKSKNGIPELRIKDAYINDFLKAQKLKPFISISHEKEFSVAVCYITKE HHHHCCCCCHHEECCCCCCCCEEEEHHHHHHHHHHHHCCCEEEECCCCCCEEEEEEEECC ERIC CCCC >Mature Secondary Structure MLGIDIIKNIRIAKALERFGYHFLNRVYTEYEINLCKMNVECLSGRFAAKEASIKAFSFL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEHHHHCCCCCCCCCCHHHHHHH SIRRFSFRDFEVVKSKNGIPELRIKDAYINDFLKAQKLKPFISISHEKEFSVAVCYITKE HHHHCCCCCHHEECCCCCCCCEEEEHHHHHHHHHHHHCCCEEEECCCCCCEEEEEEEECC ERIC CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA