Definition Hydrogenobaculum sp. Y04AAS1 chromosome, complete genome.
Accession NC_011126
Length 1,559,514

Click here to switch to the map view.

The map label for this gene is acpS

Identifier: 195952896

GI number: 195952896

Start: 458914

End: 459288

Strand: Direct

Name: acpS

Synonym: HY04AAS1_0521

Alternate gene names: 195952896

Gene position: 458914-459288 (Clockwise)

Preceding gene: 195952895

Following gene: 195952897

Centisome position: 29.43

GC content: 29.33

Gene sequence:

>375_bases
TTGTTAGGTATAGATATTATAAAAAATATAAGGATAGCTAAAGCCCTAGAAAGGTTTGGTTATCATTTTTTAAATAGGGT
ATATACAGAGTACGAAATAAATTTATGCAAAATGAACGTTGAGTGTCTATCTGGTAGATTTGCTGCAAAAGAAGCTTCTA
TAAAAGCTTTCTCATTTTTATCCATTAGACGTTTTAGTTTTAGAGATTTTGAGGTAGTAAAATCTAAAAACGGAATACCG
GAGTTAAGGATTAAAGATGCCTATATAAACGATTTTCTAAAAGCTCAAAAATTAAAACCTTTTATATCCATATCTCATGA
GAAGGAGTTTTCTGTAGCAGTTTGTTATATCACAAAAGAGGAGAGAATATGCTAA

Upstream 100 bases:

>100_bases
AACTTCTCATATTGTTTATGGCTATAAATCAAATACAATCTGCTTTTACAAATTGGTGTCCAGCCATTACAATGCTTAAA
AATCTAGGGTTAAAAGAGGA

Downstream 100 bases:

>100_bases
AAGATTACAACAAGTATTTAGATTACAAAGAAGATAAGTTATTTTTAGAAAATGTGGATTTAGAAGAGCTGGCTAAAGAA
TTTGGGACACCTCTTTATGT

Product: holo-acyl-carrier-protein synthase

Products: NA

Alternate protein names: Holo-ACP synthase; 4'-phosphopantetheinyl transferase AcpS

Number of amino acids: Translated: 124; Mature: 124

Protein sequence:

>124_residues
MLGIDIIKNIRIAKALERFGYHFLNRVYTEYEINLCKMNVECLSGRFAAKEASIKAFSFLSIRRFSFRDFEVVKSKNGIP
ELRIKDAYINDFLKAQKLKPFISISHEKEFSVAVCYITKEERIC

Sequences:

>Translated_124_residues
MLGIDIIKNIRIAKALERFGYHFLNRVYTEYEINLCKMNVECLSGRFAAKEASIKAFSFLSIRRFSFRDFEVVKSKNGIP
ELRIKDAYINDFLKAQKLKPFISISHEKEFSVAVCYITKEERIC
>Mature_124_residues
MLGIDIIKNIRIAKALERFGYHFLNRVYTEYEINLCKMNVECLSGRFAAKEASIKAFSFLSIRRFSFRDFEVVKSKNGIP
ELRIKDAYINDFLKAQKLKPFISISHEKEFSVAVCYITKEERIC

Specific function: Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein

COG id: COG0736

COG function: function code I; Phosphopantetheinyl transferase (holo-ACP synthase)

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the P-Pant transferase superfamily. AcpS family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ACPS_HYDS0 (B4U7U7)

Other databases:

- EMBL:   CP001130
- RefSeq:   YP_002121186.1
- ProteinModelPortal:   B4U7U7
- SMR:   B4U7U7
- GeneID:   6743317
- GenomeReviews:   CP001130_GR
- KEGG:   hya:HY04AAS1_0521
- HOGENOM:   HBG734479
- GO:   GO:0005737
- HAMAP:   MF_00101
- InterPro:   IPR008278
- InterPro:   IPR002582
- InterPro:   IPR004568
- ProDom:   PD004282
- TIGRFAMs:   TIGR00516
- TIGRFAMs:   TIGR00556

Pfam domain/function: PF01648 ACPS; SSF56214 4-PPT_transf

EC number: =2.7.8.7

Molecular weight: Translated: 14526; Mature: 14526

Theoretical pI: Translated: 9.68; Mature: 9.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLGIDIIKNIRIAKALERFGYHFLNRVYTEYEINLCKMNVECLSGRFAAKEASIKAFSFL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEHHHHCCCCCCCCCCHHHHHHH
SIRRFSFRDFEVVKSKNGIPELRIKDAYINDFLKAQKLKPFISISHEKEFSVAVCYITKE
HHHHCCCCCHHEECCCCCCCCEEEEHHHHHHHHHHHHCCCEEEECCCCCCEEEEEEEECC
ERIC
CCCC
>Mature Secondary Structure
MLGIDIIKNIRIAKALERFGYHFLNRVYTEYEINLCKMNVECLSGRFAAKEASIKAFSFL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEHHHHCCCCCCCCCCHHHHHHH
SIRRFSFRDFEVVKSKNGIPELRIKDAYINDFLKAQKLKPFISISHEKEFSVAVCYITKE
HHHHCCCCCHHEECCCCCCCCEEEEHHHHHHHHHHHHCCCEEEECCCCCCEEEEEEEECC
ERIC
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA