Definition Hydrogenobaculum sp. Y04AAS1 chromosome, complete genome.
Accession NC_011126
Length 1,559,514

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The map label for this gene is 195952879

Identifier: 195952879

GI number: 195952879

Start: 443462

End: 443896

Strand: Direct

Name: 195952879

Synonym: HY04AAS1_0504

Alternate gene names: NA

Gene position: 443462-443896 (Clockwise)

Preceding gene: 195952872

Following gene: 195952880

Centisome position: 28.44

GC content: 29.43

Gene sequence:

>435_bases
ATGAAGAAACTTATAATCCCTTTATATCTTTTTCTTGTAGCTTTATCATACGCTCAAAGTTTTTGTATAAAAGAAAAATC
TGGAGCTTTTATAGAAGATCCTTATATAAAAGAGTATGTGATAAAGTCTGTGGAAGAGGCTTTTATAGAAGCAAAAAAAC
CCTTAGATTGTAACTCTAAAAGCTATAAAACTGTGTTCTTAAAAGTCACAAATTTATCTGATATGCCAATAGGATATTCT
ATATATCAAAGGGCAAACAACTATATTTTAAACTTAAGCATAGAGCTTAATATAGCTAACAAAAAATATACTTACTTTCA
AAGCTCTTATTACGCTTTACCTACCGGTGGAGAAGGAGATTTACCAAAAAGACAAGCTTTGGAAGATGCTATGGATAGAA
TAAAGGATATGATAATTGAAGACTTGTTGAAATGA

Upstream 100 bases:

>100_bases
ACCGTTGCTTCCTTCCGGACCTGGCGGGGTTCACCCTGTCCCGTTGCAAGGTTATTAATATTATAGCATAAATATTTTTT
ATGATATCATATTATTTCGT

Downstream 100 bases:

>100_bases
TAAATAAAGATAAATATTACATGAAACTAGCTTTGGAAGAAGCATACAAATACAAGGGCCAAACCCATCCAAACCCTGCA
GTAGGAGTACTTATAGTAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 144; Mature: 144

Protein sequence:

>144_residues
MKKLIIPLYLFLVALSYAQSFCIKEKSGAFIEDPYIKEYVIKSVEEAFIEAKKPLDCNSKSYKTVFLKVTNLSDMPIGYS
IYQRANNYILNLSIELNIANKKYTYFQSSYYALPTGGEGDLPKRQALEDAMDRIKDMIIEDLLK

Sequences:

>Translated_144_residues
MKKLIIPLYLFLVALSYAQSFCIKEKSGAFIEDPYIKEYVIKSVEEAFIEAKKPLDCNSKSYKTVFLKVTNLSDMPIGYS
IYQRANNYILNLSIELNIANKKYTYFQSSYYALPTGGEGDLPKRQALEDAMDRIKDMIIEDLLK
>Mature_144_residues
MKKLIIPLYLFLVALSYAQSFCIKEKSGAFIEDPYIKEYVIKSVEEAFIEAKKPLDCNSKSYKTVFLKVTNLSDMPIGYS
IYQRANNYILNLSIELNIANKKYTYFQSSYYALPTGGEGDLPKRQALEDAMDRIKDMIIEDLLK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16577; Mature: 16577

Theoretical pI: Translated: 8.12; Mature: 8.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLIIPLYLFLVALSYAQSFCIKEKSGAFIEDPYIKEYVIKSVEEAFIEAKKPLDCNSK
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC
SYKTVFLKVTNLSDMPIGYSIYQRANNYILNLSIELNIANKKYTYFQSSYYALPTGGEGD
CEEEEEEEEECCCCCCCCHHHHHCCCCEEEEEEEEEEECCCEEEEECCCEEECCCCCCCC
LPKRQALEDAMDRIKDMIIEDLLK
CCHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MKKLIIPLYLFLVALSYAQSFCIKEKSGAFIEDPYIKEYVIKSVEEAFIEAKKPLDCNSK
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC
SYKTVFLKVTNLSDMPIGYSIYQRANNYILNLSIELNIANKKYTYFQSSYYALPTGGEGD
CEEEEEEEEECCCCCCCCHHHHHCCCCEEEEEEEEEEECCCEEEEECCCEEECCCCCCCC
LPKRQALEDAMDRIKDMIIEDLLK
CCHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]