Definition Hydrogenobaculum sp. Y04AAS1 chromosome, complete genome.
Accession NC_011126
Length 1,559,514

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The map label for this gene is ycaR [C]

Identifier: 195952863

GI number: 195952863

Start: 429682

End: 429867

Strand: Direct

Name: ycaR [C]

Synonym: HY04AAS1_0488

Alternate gene names: 195952863

Gene position: 429682-429867 (Clockwise)

Preceding gene: 195952862

Following gene: 195952864

Centisome position: 27.55

GC content: 32.26

Gene sequence:

>186_bases
ATGATAAACAAAGAACTATTAGATATCATAGCTTGTCCTAAGTGTAAGGGCGGGCTTCTTTACAACGAAAAGAAGGATAT
ATTAATTTGTGGTAATTGTAAACTCGTTTACGAGATTGAAGAAGATATACCAATTCTTCTTGTAGAACAAGCAAAACCTC
TTGATGAATACATCAAAAAACCTTAG

Upstream 100 bases:

>100_bases
GTGGTTTTGGTGAAGCGGGAGAAGGTTATTTTAGGATATCTCTTACCGTAGATACAAATAGACTAAAAGAAGCTGCCGAT
AGGATAAAAACGCTCACTTT

Downstream 100 bases:

>100_bases
TTTTCTCTGTGGGTGGGGTAGATTTCCTTGCATAGAAGCAAATGTTTTAGATAAAGTAGATTTTTCTAAAAGCTTTATAC
CAAGAGCTTACGGTAGAAGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 61; Mature: 61

Protein sequence:

>61_residues
MINKELLDIIACPKCKGGLLYNEKKDILICGNCKLVYEIEEDIPILLVEQAKPLDEYIKKP

Sequences:

>Translated_61_residues
MINKELLDIIACPKCKGGLLYNEKKDILICGNCKLVYEIEEDIPILLVEQAKPLDEYIKKP
>Mature_61_residues
MINKELLDIIACPKCKGGLLYNEKKDILICGNCKLVYEIEEDIPILLVEQAKPLDEYIKKP

Specific function: Unknown

COG id: COG2835

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 6976; Mature: 6976

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
8.2 %Cys+Met (Translated Protein)
6.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
8.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINKELLDIIACPKCKGGLLYNEKKDILICGNCKLVYEIEEDIPILLVEQAKPLDEYIKK
CCCHHHHHHHCCCCCCCCEEECCCCCEEEECCCEEEEEECCCCCEEEECCCCCHHHHCCC
P
C
>Mature Secondary Structure
MINKELLDIIACPKCKGGLLYNEKKDILICGNCKLVYEIEEDIPILLVEQAKPLDEYIKK
CCCHHHHHHHCCCCCCCCEEECCCCCEEEECCCEEEEEECCCCCEEEECCCCCHHHHCCC
P
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA