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The map label for this gene is 195952831

Identifier: 195952831

GI number: 195952831

Start: 394008

End: 394418

Strand: Direct

Name: 195952831

Synonym: HY04AAS1_0453

Alternate gene names: NA

Gene position: 394008-394418 (Clockwise)

Preceding gene: 195952830

Following gene: 195952832

Centisome position: 25.26

GC content: 27.01

Gene sequence:

>411_bases
GTGCTTTTATTAGACACAAACATAATATTGGAAATAGCATTGGAACAAGAAAAAGCTCAAGAATGTGTAAATTTGTTAGA
ACAGTACGATAAAATTGATTTTTTTATATCTGATTTCTCGATTCATTCAATAGGTGTAATACTTAAGAAACGAAACAAGC
TTGAAAAATTTGATAAATTGATAGAAGACCTTAGACTTGTTCTAAAAGCTATATTGTCGCTAGACCATTATTATGACTTA
AAACGATTGATAAATATAATGAAAGTGTTTGATCTTGATTTTGATGATGCTTATCAATATAGAATAGCAGAAAAATACAA
ACTAACCATTGTTAGTTTTGATAAAGATTTTGATAAAACAAAATTAGGCAGGAGAACAACAACAGAGATTTTACAAACAA
TCAATCATTGA

Upstream 100 bases:

>100_bases
TCCTTCTTTTGAATGGAGGGGCTGTTTATCTGATTTAAAGGATAAGTATACATCTGTGGAGTTACAACATAAGATTTGGG
ATATTGAATTATAAAATTTG

Downstream 100 bases:

>100_bases
CGCTAAGCTTTTAAAGCCAAAATAGTGGTTTTTGTGTCTTATACATTATATTTTCATTTAGAATGAGTATAATATAAGCT
GTGAGATTTAAGGCATTAAA

Product: PilT protein domain-containing protein

Products: NA

Alternate protein names: PilT Domain-Containing Protein; PIN Domain Protein; PilT Protein-Like

Number of amino acids: Translated: 136; Mature: 136

Protein sequence:

>136_residues
MLLLDTNIILEIALEQEKAQECVNLLEQYDKIDFFISDFSIHSIGVILKKRNKLEKFDKLIEDLRLVLKAILSLDHYYDL
KRLINIMKVFDLDFDDAYQYRIAEKYKLTIVSFDKDFDKTKLGRRTTTEILQTINH

Sequences:

>Translated_136_residues
MLLLDTNIILEIALEQEKAQECVNLLEQYDKIDFFISDFSIHSIGVILKKRNKLEKFDKLIEDLRLVLKAILSLDHYYDL
KRLINIMKVFDLDFDDAYQYRIAEKYKLTIVSFDKDFDKTKLGRRTTTEILQTINH
>Mature_136_residues
MLLLDTNIILEIALEQEKAQECVNLLEQYDKIDFFISDFSIHSIGVILKKRNKLEKFDKLIEDLRLVLKAILSLDHYYDL
KRLINIMKVFDLDFDDAYQYRIAEKYKLTIVSFDKDFDKTKLGRRTTTEILQTINH

Specific function: Unknown

COG id: COG2402

COG function: function code R; Predicted nucleic acid-binding protein, contains PIN domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16206; Mature: 16206

Theoretical pI: Translated: 5.73; Mature: 5.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLLDTNIILEIALEQEKAQECVNLLEQYDKIDFFISDFSIHSIGVILKKRNKLEKFDKL
CEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
IEDLRLVLKAILSLDHYYDLKRLINIMKVFDLDFDDAYQYRIAEKYKLTIVSFDKDFDKT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHEEEEEEECCCCCCHH
KLGRRTTTEILQTINH
HCCCHHHHHHHHHHCC
>Mature Secondary Structure
MLLLDTNIILEIALEQEKAQECVNLLEQYDKIDFFISDFSIHSIGVILKKRNKLEKFDKL
CEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
IEDLRLVLKAILSLDHYYDLKRLINIMKVFDLDFDDAYQYRIAEKYKLTIVSFDKDFDKT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHEEEEEEECCCCCCHH
KLGRRTTTEILQTINH
HCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA