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The map label for this gene is rfaB [C]

Identifier: 195952810

GI number: 195952810

Start: 377624

End: 378676

Strand: Direct

Name: rfaB [C]

Synonym: HY04AAS1_0432

Alternate gene names: 195952810

Gene position: 377624-378676 (Clockwise)

Preceding gene: 195952794

Following gene: 195952811

Centisome position: 24.21

GC content: 30.77

Gene sequence:

>1053_bases
ATGATGAAAATAGCTCATGTTATAAATACTTTAGCAGGTGCAGGCGCTGAAAGGGTCGCTTTAGATGTTTTTGATTGTTT
AAAAGGATATGATCAAGAGTTTATAGTGGCTAAAAACATCATAGATTATGAAATAGATTTTAGACCTAAGATATTGTTTA
ATATTAAAAAGAAGCCCTTTTATATACCAGCTTTTATATATGAGAAAATCCTTCTTAATAAGCTATCCAAGGCTTTAAAA
GATTTTGATGTGATAATATCCCATCTAAGGGATATGAATACAAGGCTTTGCCTTCTTAAGAGTAAAAATCTTATAAAAGC
AAAGCTTATAATAGTAGAGCATGTACCAAAAGAGCTTTACTCTAAAAAAGAGATAAAGTATATAAAAAGTCTTTATAAAT
ATGCAGATATAGGAGTGGGTGTATCAGAAAAGGTTGTTAAGGATTTGGAAGAATACGGAGTTAAAAAGACAGTTCTTATA
GAAAACGCGATAGATCACGATAAGATAAAAACGCTATCTTTAGAAGAAGATATAACCTTTGATAAATTTAGTTTTTTAAG
CGTTGGTAGGCTAAGCGAGGATAAAGATTATTCCACACTTTTAAAGGCTTTTAAAATAGCAAATGTAGATGCACATCTTT
TTATAATAGGAGAGGGTTCTAAAAAACAAGAGCTTTTAAATCTTTCTAAAAGCTTAAAAATAGAAGATAAGGTTAAGTTT
TTGGGTTTTAAGAAAAACCCATTTCCATATGTAAGAGCTTGTGATGTGTTTGTTAGTTCTTCAAAAAGAGAGTCTTTTTC
CATGGTGGTGTTAGAAGCAATGGGTCTTGGTAAAGCAGTTATATGTACAGATGTGGTGCCCTTTGCCAAAGATGGTTTTA
ACGCTTTGGTGGTGCCAAAAGAAGATGAAGAAGCTCTTTCAAAAGCCCTTATAAAAATTTACCAAGATAAGAATTTAAGA
GATGGCTTATCTCAAAATGCCTTTTTGTTTTCACAATCTTATTCCAAATCTTATTTTTGCGGGAAATATAAAAATATCAT
TACTATGCTATAA

Upstream 100 bases:

>100_bases
ATCTATTTTGCTTATTAACTTGCCTAAACCTTCCAAAACATTTAGCATATCATAAATATAATAATTCAAAAACAATAGCT
TATGATATATAATCATATAT

Downstream 100 bases:

>100_bases
TACTCTAAGATGGAATGCCCAGATACAACGCTTGGGAAATATGTGATAAAACCTCTTTGGTTTGGTATAAGAGGTATTTT
TAGAAGTGTATTTAAGATTA

Product: group 1 glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 350; Mature: 350

Protein sequence:

>350_residues
MMKIAHVINTLAGAGAERVALDVFDCLKGYDQEFIVAKNIIDYEIDFRPKILFNIKKKPFYIPAFIYEKILLNKLSKALK
DFDVIISHLRDMNTRLCLLKSKNLIKAKLIIVEHVPKELYSKKEIKYIKSLYKYADIGVGVSEKVVKDLEEYGVKKTVLI
ENAIDHDKIKTLSLEEDITFDKFSFLSVGRLSEDKDYSTLLKAFKIANVDAHLFIIGEGSKKQELLNLSKSLKIEDKVKF
LGFKKNPFPYVRACDVFVSSSKRESFSMVVLEAMGLGKAVICTDVVPFAKDGFNALVVPKEDEEALSKALIKIYQDKNLR
DGLSQNAFLFSQSYSKSYFCGKYKNIITML

Sequences:

>Translated_350_residues
MMKIAHVINTLAGAGAERVALDVFDCLKGYDQEFIVAKNIIDYEIDFRPKILFNIKKKPFYIPAFIYEKILLNKLSKALK
DFDVIISHLRDMNTRLCLLKSKNLIKAKLIIVEHVPKELYSKKEIKYIKSLYKYADIGVGVSEKVVKDLEEYGVKKTVLI
ENAIDHDKIKTLSLEEDITFDKFSFLSVGRLSEDKDYSTLLKAFKIANVDAHLFIIGEGSKKQELLNLSKSLKIEDKVKF
LGFKKNPFPYVRACDVFVSSSKRESFSMVVLEAMGLGKAVICTDVVPFAKDGFNALVVPKEDEEALSKALIKIYQDKNLR
DGLSQNAFLFSQSYSKSYFCGKYKNIITML
>Mature_350_residues
MMKIAHVINTLAGAGAERVALDVFDCLKGYDQEFIVAKNIIDYEIDFRPKILFNIKKKPFYIPAFIYEKILLNKLSKALK
DFDVIISHLRDMNTRLCLLKSKNLIKAKLIIVEHVPKELYSKKEIKYIKSLYKYADIGVGVSEKVVKDLEEYGVKKTVLI
ENAIDHDKIKTLSLEEDITFDKFSFLSVGRLSEDKDYSTLLKAFKIANVDAHLFIIGEGSKKQELLNLSKSLKIEDKVKF
LGFKKNPFPYVRACDVFVSSSKRESFSMVVLEAMGLGKAVICTDVVPFAKDGFNALVVPKEDEEALSKALIKIYQDKNLR
DGLSQNAFLFSQSYSKSYFCGKYKNIITML

Specific function: Adds A Galactose Goup To A Glucose Group Of Lps. [C]

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: 2.4.1.- [C]

Molecular weight: Translated: 39857; Mature: 39857

Theoretical pI: Translated: 9.52; Mature: 9.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKIAHVINTLAGAGAERVALDVFDCLKGYDQEFIVAKNIIDYEIDFRPKILFNIKKKPF
CCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEEECCEEEEEECCCCEEEEEECCCCE
YIPAFIYEKILLNKLSKALKDFDVIISHLRDMNTRLCLLKSKNLIKAKLIIVEHVPKELY
EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEHEEHHHHHCCHHHH
SKKEIKYIKSLYKYADIGVGVSEKVVKDLEEYGVKKTVLIENAIDHDKIKTLSLEEDITF
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCEEEEEEECCCCCCCEEEEECCCCCCC
DKFSFLSVGRLSEDKDYSTLLKAFKIANVDAHLFIIGEGSKKQELLNLSKSLKIEDKVKF
CHHHHHCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHCCCCHHHHHE
LGFKKNPFPYVRACDVFVSSSKRESFSMVVLEAMGLGKAVICTDVVPFAKDGFNALVVPK
EECCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEEEECCCCHHHCCCCCEEEECC
EDEEALSKALIKIYQDKNLRDGLSQNAFLFSQSYSKSYFCGKYKNIITML
CCHHHHHHHHHHHHCCCCHHCCCCCCEEEEECCCCCCCCHHHHHHHHHCC
>Mature Secondary Structure
MMKIAHVINTLAGAGAERVALDVFDCLKGYDQEFIVAKNIIDYEIDFRPKILFNIKKKPF
CCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEEECCEEEEEECCCCEEEEEECCCCE
YIPAFIYEKILLNKLSKALKDFDVIISHLRDMNTRLCLLKSKNLIKAKLIIVEHVPKELY
EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEHEEHHHHHCCHHHH
SKKEIKYIKSLYKYADIGVGVSEKVVKDLEEYGVKKTVLIENAIDHDKIKTLSLEEDITF
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCEEEEEEECCCCCCCEEEEECCCCCCC
DKFSFLSVGRLSEDKDYSTLLKAFKIANVDAHLFIIGEGSKKQELLNLSKSLKIEDKVKF
CHHHHHCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHCCCCHHHHHE
LGFKKNPFPYVRACDVFVSSSKRESFSMVVLEAMGLGKAVICTDVVPFAKDGFNALVVPK
EECCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEEEECCCCHHHCCCCCEEEECC
EDEEALSKALIKIYQDKNLRDGLSQNAFLFSQSYSKSYFCGKYKNIITML
CCHHHHHHHHHHHHCCCCHHCCCCCCEEEEECCCCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Glycosyltransferases; Hexosyltransferases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]