| Definition | Hydrogenobaculum sp. Y04AAS1 chromosome, complete genome. |
|---|---|
| Accession | NC_011126 |
| Length | 1,559,514 |
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The map label for this gene is 195952794
Identifier: 195952794
GI number: 195952794
Start: 360924
End: 361532
Strand: Direct
Name: 195952794
Synonym: HY04AAS1_0416
Alternate gene names: NA
Gene position: 360924-361532 (Clockwise)
Preceding gene: 195952793
Following gene: 195952810
Centisome position: 23.14
GC content: 33.66
Gene sequence:
>609_bases ATGGGTGATATCAAAATGAAGGCAAGCGAGTATGCGGCAATGATGTCAGTGTCATTAAATACTGTCAAAAATAGGATAAA AGCTGGAATACTAAATGGTGCCAAAGAAGAAGATGGTATATGGTATGTATATTTGACATCAGACGAATATGAAAATCTGC AAAACAGCAAAGAAAAATCTCAAGAAAGAGAACAGGCTATCTCAGACTCTATAGAAAAATTGAAAGCCCTTCCAGATGGC GCTCTTATAGCCACGTATATCAATATTCAAAGATATGCCGAGTTTCAAAAGCAAGAGCTTATGCAAGAGCTTTCTAGCTT GTATGCTTTGCTGGCTGTAAAAGAGAAAGAGATAGAGTTTTTATCAAAGGATTTAGACCGTTATAAAAGCAAAATAGAAG AGCTTAAAGAAGAAAACTTATCGTTATCTGAAAAGCTAAAAAACCTAAGCAAAGAGTTAGAAGATTGTAAAAAAGAGTAC AAAGATCTAGACAACAAATATCAAAGAGCAGACATAGATATGAAAAAAATAATCCTTGATAAAGAAAAAGAGATACTTGA GAAAGAGCGGGAGATAGAAGAGTTAAAGAGGAAACTATCTATGCTATAA
Upstream 100 bases:
>100_bases GTTAACAAATGAAAGCTTTCATATCTTGATATCAAGAAAATTTGACATCAATGATATAAAATGATATATTAATATTATCA AAATATTGGAGGTAAGTCAA
Downstream 100 bases:
>100_bases GCTTTAAAAATTTTTAACACTATATCCTTGAGTTTATGAGGCTTTTAAGATAAAAATAGCTTAATTCTTTTTTGTATTGA CGCCTTATTATATCCATTAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 202; Mature: 201
Protein sequence:
>202_residues MGDIKMKASEYAAMMSVSLNTVKNRIKAGILNGAKEEDGIWYVYLTSDEYENLQNSKEKSQEREQAISDSIEKLKALPDG ALIATYINIQRYAEFQKQELMQELSSLYALLAVKEKEIEFLSKDLDRYKSKIEELKEENLSLSEKLKNLSKELEDCKKEY KDLDNKYQRADIDMKKIILDKEKEILEKEREIEELKRKLSML
Sequences:
>Translated_202_residues MGDIKMKASEYAAMMSVSLNTVKNRIKAGILNGAKEEDGIWYVYLTSDEYENLQNSKEKSQEREQAISDSIEKLKALPDG ALIATYINIQRYAEFQKQELMQELSSLYALLAVKEKEIEFLSKDLDRYKSKIEELKEENLSLSEKLKNLSKELEDCKKEY KDLDNKYQRADIDMKKIILDKEKEILEKEREIEELKRKLSML >Mature_201_residues GDIKMKASEYAAMMSVSLNTVKNRIKAGILNGAKEEDGIWYVYLTSDEYENLQNSKEKSQEREQAISDSIEKLKALPDGA LIATYINIQRYAEFQKQELMQELSSLYALLAVKEKEIEFLSKDLDRYKSKIEELKEENLSLSEKLKNLSKELEDCKKEYK DLDNKYQRADIDMKKIILDKEKEILEKEREIEELKRKLSML
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23664; Mature: 23533
Theoretical pI: Translated: 4.84; Mature: 4.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGDIKMKASEYAAMMSVSLNTVKNRIKAGILNGAKEEDGIWYVYLTSDEYENLQNSKEKS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHHHHH QEREQAISDSIEKLKALPDGALIATYINIQRYAEFQKQELMQELSSLYALLAVKEKEIEF HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSKDLDRYKSKIEELKEENLSLSEKLKNLSKELEDCKKEYKDLDNKYQRADIDMKKIILD HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH KEKEILEKEREIEELKRKLSML HHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure GDIKMKASEYAAMMSVSLNTVKNRIKAGILNGAKEEDGIWYVYLTSDEYENLQNSKEKS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHHHHH QEREQAISDSIEKLKALPDGALIATYINIQRYAEFQKQELMQELSSLYALLAVKEKEIEF HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSKDLDRYKSKIEELKEENLSLSEKLKNLSKELEDCKKEYKDLDNKYQRADIDMKKIILD HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH KEKEILEKEREIEELKRKLSML HHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA