Definition Hydrogenobaculum sp. Y04AAS1 chromosome, complete genome.
Accession NC_011126
Length 1,559,514

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The map label for this gene is 195952794

Identifier: 195952794

GI number: 195952794

Start: 360924

End: 361532

Strand: Direct

Name: 195952794

Synonym: HY04AAS1_0416

Alternate gene names: NA

Gene position: 360924-361532 (Clockwise)

Preceding gene: 195952793

Following gene: 195952810

Centisome position: 23.14

GC content: 33.66

Gene sequence:

>609_bases
ATGGGTGATATCAAAATGAAGGCAAGCGAGTATGCGGCAATGATGTCAGTGTCATTAAATACTGTCAAAAATAGGATAAA
AGCTGGAATACTAAATGGTGCCAAAGAAGAAGATGGTATATGGTATGTATATTTGACATCAGACGAATATGAAAATCTGC
AAAACAGCAAAGAAAAATCTCAAGAAAGAGAACAGGCTATCTCAGACTCTATAGAAAAATTGAAAGCCCTTCCAGATGGC
GCTCTTATAGCCACGTATATCAATATTCAAAGATATGCCGAGTTTCAAAAGCAAGAGCTTATGCAAGAGCTTTCTAGCTT
GTATGCTTTGCTGGCTGTAAAAGAGAAAGAGATAGAGTTTTTATCAAAGGATTTAGACCGTTATAAAAGCAAAATAGAAG
AGCTTAAAGAAGAAAACTTATCGTTATCTGAAAAGCTAAAAAACCTAAGCAAAGAGTTAGAAGATTGTAAAAAAGAGTAC
AAAGATCTAGACAACAAATATCAAAGAGCAGACATAGATATGAAAAAAATAATCCTTGATAAAGAAAAAGAGATACTTGA
GAAAGAGCGGGAGATAGAAGAGTTAAAGAGGAAACTATCTATGCTATAA

Upstream 100 bases:

>100_bases
GTTAACAAATGAAAGCTTTCATATCTTGATATCAAGAAAATTTGACATCAATGATATAAAATGATATATTAATATTATCA
AAATATTGGAGGTAAGTCAA

Downstream 100 bases:

>100_bases
GCTTTAAAAATTTTTAACACTATATCCTTGAGTTTATGAGGCTTTTAAGATAAAAATAGCTTAATTCTTTTTTGTATTGA
CGCCTTATTATATCCATTAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 202; Mature: 201

Protein sequence:

>202_residues
MGDIKMKASEYAAMMSVSLNTVKNRIKAGILNGAKEEDGIWYVYLTSDEYENLQNSKEKSQEREQAISDSIEKLKALPDG
ALIATYINIQRYAEFQKQELMQELSSLYALLAVKEKEIEFLSKDLDRYKSKIEELKEENLSLSEKLKNLSKELEDCKKEY
KDLDNKYQRADIDMKKIILDKEKEILEKEREIEELKRKLSML

Sequences:

>Translated_202_residues
MGDIKMKASEYAAMMSVSLNTVKNRIKAGILNGAKEEDGIWYVYLTSDEYENLQNSKEKSQEREQAISDSIEKLKALPDG
ALIATYINIQRYAEFQKQELMQELSSLYALLAVKEKEIEFLSKDLDRYKSKIEELKEENLSLSEKLKNLSKELEDCKKEY
KDLDNKYQRADIDMKKIILDKEKEILEKEREIEELKRKLSML
>Mature_201_residues
GDIKMKASEYAAMMSVSLNTVKNRIKAGILNGAKEEDGIWYVYLTSDEYENLQNSKEKSQEREQAISDSIEKLKALPDGA
LIATYINIQRYAEFQKQELMQELSSLYALLAVKEKEIEFLSKDLDRYKSKIEELKEENLSLSEKLKNLSKELEDCKKEYK
DLDNKYQRADIDMKKIILDKEKEILEKEREIEELKRKLSML

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23664; Mature: 23533

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGDIKMKASEYAAMMSVSLNTVKNRIKAGILNGAKEEDGIWYVYLTSDEYENLQNSKEKS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHHHHH
QEREQAISDSIEKLKALPDGALIATYINIQRYAEFQKQELMQELSSLYALLAVKEKEIEF
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSKDLDRYKSKIEELKEENLSLSEKLKNLSKELEDCKKEYKDLDNKYQRADIDMKKIILD
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
KEKEILEKEREIEELKRKLSML
HHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GDIKMKASEYAAMMSVSLNTVKNRIKAGILNGAKEEDGIWYVYLTSDEYENLQNSKEKS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHHHHH
QEREQAISDSIEKLKALPDGALIATYINIQRYAEFQKQELMQELSSLYALLAVKEKEIEF
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSKDLDRYKSKIEELKEENLSLSEKLKNLSKELEDCKKEYKDLDNKYQRADIDMKKIILD
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
KEKEILEKEREIEELKRKLSML
HHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA