| Definition | Hydrogenobaculum sp. Y04AAS1 chromosome, complete genome. |
|---|---|
| Accession | NC_011126 |
| Length | 1,559,514 |
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The map label for this gene is argS [H]
Identifier: 195952792
GI number: 195952792
Start: 358046
End: 359665
Strand: Direct
Name: argS [H]
Synonym: HY04AAS1_0414
Alternate gene names: 195952792
Gene position: 358046-359665 (Clockwise)
Preceding gene: 195952791
Following gene: 195952793
Centisome position: 22.96
GC content: 32.96
Gene sequence:
>1620_bases ATGAAACAACTAATAAAAGAAATTGTTCAAAAAACCATCAAAAATTTGTACGATGTTGAGATAGAACCCCAGATACAGCT TCCAAAAGAAGAATCTTACGGAAATTTTGCCTCAAATATAGCTTTTATACTCTCAAAAGCCCTAAAACAAAAACCTCAGG ATATAGCAATAACTATCGCAGATAACCTAAAAAATCTCCCTCATTTTGAAAAAGTAGAAGCGCTAAATGGCTTTGTAAAT ATGAAACTATCAAGCGTTTTTTACGAGGGACTTTTGTTTGAGTTTTTAGAAAATCCTATAAACTATATAAAAGATGATGC CATTTTTGAGGCTTTTGGTATAAAAAAAGAAGATAAGATAAATTTAGAGTATGTGAGTGCAAATCCCACAGGACCCCTTC ATCTTGGACACGGAAGAGGAGCCGTAATAGGAGATGTGCTTTATAGGCTGTTTAGATTTTTTGATATAAAAGTTGATAGA GAATACTACATAAACGATGCAGGCAATCAGGTAAACTTACTGGCAAAAAGTGTAATGCATTATATAAACCAGGATTTATA CCCATTTCCAGAAGATGGCTACAAAGGAGATTATATAAAAGATATAGCAGAGGCGTTTTTAAAAGAGCATAACAAAAGCA ATATAAACCTCGAAATAAACCTAGAAAGAGTCAAGGATTTTGCAATATCAAAGATGATGGAAGATATAAAGAATACGTTG AAGCTTTTAAATGTAGAGTTTGATATATATTTTAGTGAAAAGACCCTAAAAGATAAGGTAGAAAAAGTTTTAGAGCTTTT AAAAGAGAAAAATCTTATAGAAGAAAAAGAAGGGGCTATTTGGTTTAAATCAAAAGATGAAGACAAAGATAGAGTGCTAA GAAAAAGCGATGGGTCTTATACATACTTTGCTTCTGATATAGCTTATCATCTTGACAAATACCAAAGAGGATACAAAAAA GCTATAGACCTATGGGGAGCAGATCATCATGGATATATACCACGTTTAAAAGCAGCTTTGGAAGCTCTTGATATACCACA AGATTGGCTTAGTGTGGAGCTTTTCCAAATCGTAAAGCTTTTTGAAAACGGTCAAGAAGTAAGGATGTCAAAACGCACCG GCAAGATGCTAAAGCTAATAGATGTAATAGAGGACATAGGAGCAGATAATCTAAGGTTTATGTTCTTAACCAAAAAAGCC GATACACCCCTTGATATAGATATAAATTTAGTAAAAGCCCAAAACTCTGAAAACCCAGTGTTTTATGTGCAATACGCCTA TGCAAGGACAATGGGTATAAAAAGACAACTAAAAGAGCCCTTTGTATTTGGCTTTTACAAGGATAAATATACATACGAAG AAGAGGAATTAGATCTTATAAAACGAATTCTTTCTTCAAAGGACGTGCTTTTTGAAGGAGTTATCAAAAAAGACCCAAGC CTCGTGGTAAAGTTATCCCTTGATATAGCTAAAAGCTTTCACAAATTTTACAACACCCATAAAGTAATCACTTCAGATGA AATCACCACAAAAAAACGTATATCCTTAGTTTATGCCACTCAAAAGATATTTGATATTATATTTGATATTTTAAGCATAA AAGCCCCAGAGATGATGTAA
Upstream 100 bases:
>100_bases AACCTACGGAAAGTTTATAAAGATAGTAAGCCCGTTCTTGATAATAGCTGGTATATGTGTGATACTTCTGGCAGTTATAA GACCCTCTTGAGGAGTATAT
Downstream 100 bases:
>100_bases AAACAAAAGGTCGTAAAGCCCTTTGCCTACCAAATTAGTACCATTGTTTTCGTTGACTAGTACAGAATCCATTTGTCTTA CAGCCAAGTTGCATATATAT
Product: arginyl-tRNA synthetase
Products: NA
Alternate protein names: Arginine--tRNA ligase; ArgRS [H]
Number of amino acids: Translated: 539; Mature: 539
Protein sequence:
>539_residues MKQLIKEIVQKTIKNLYDVEIEPQIQLPKEESYGNFASNIAFILSKALKQKPQDIAITIADNLKNLPHFEKVEALNGFVN MKLSSVFYEGLLFEFLENPINYIKDDAIFEAFGIKKEDKINLEYVSANPTGPLHLGHGRGAVIGDVLYRLFRFFDIKVDR EYYINDAGNQVNLLAKSVMHYINQDLYPFPEDGYKGDYIKDIAEAFLKEHNKSNINLEINLERVKDFAISKMMEDIKNTL KLLNVEFDIYFSEKTLKDKVEKVLELLKEKNLIEEKEGAIWFKSKDEDKDRVLRKSDGSYTYFASDIAYHLDKYQRGYKK AIDLWGADHHGYIPRLKAALEALDIPQDWLSVELFQIVKLFENGQEVRMSKRTGKMLKLIDVIEDIGADNLRFMFLTKKA DTPLDIDINLVKAQNSENPVFYVQYAYARTMGIKRQLKEPFVFGFYKDKYTYEEEELDLIKRILSSKDVLFEGVIKKDPS LVVKLSLDIAKSFHKFYNTHKVITSDEITTKKRISLVYATQKIFDIIFDILSIKAPEMM
Sequences:
>Translated_539_residues MKQLIKEIVQKTIKNLYDVEIEPQIQLPKEESYGNFASNIAFILSKALKQKPQDIAITIADNLKNLPHFEKVEALNGFVN MKLSSVFYEGLLFEFLENPINYIKDDAIFEAFGIKKEDKINLEYVSANPTGPLHLGHGRGAVIGDVLYRLFRFFDIKVDR EYYINDAGNQVNLLAKSVMHYINQDLYPFPEDGYKGDYIKDIAEAFLKEHNKSNINLEINLERVKDFAISKMMEDIKNTL KLLNVEFDIYFSEKTLKDKVEKVLELLKEKNLIEEKEGAIWFKSKDEDKDRVLRKSDGSYTYFASDIAYHLDKYQRGYKK AIDLWGADHHGYIPRLKAALEALDIPQDWLSVELFQIVKLFENGQEVRMSKRTGKMLKLIDVIEDIGADNLRFMFLTKKA DTPLDIDINLVKAQNSENPVFYVQYAYARTMGIKRQLKEPFVFGFYKDKYTYEEEELDLIKRILSSKDVLFEGVIKKDPS LVVKLSLDIAKSFHKFYNTHKVITSDEITTKKRISLVYATQKIFDIIFDILSIKAPEMM >Mature_539_residues MKQLIKEIVQKTIKNLYDVEIEPQIQLPKEESYGNFASNIAFILSKALKQKPQDIAITIADNLKNLPHFEKVEALNGFVN MKLSSVFYEGLLFEFLENPINYIKDDAIFEAFGIKKEDKINLEYVSANPTGPLHLGHGRGAVIGDVLYRLFRFFDIKVDR EYYINDAGNQVNLLAKSVMHYINQDLYPFPEDGYKGDYIKDIAEAFLKEHNKSNINLEINLERVKDFAISKMMEDIKNTL KLLNVEFDIYFSEKTLKDKVEKVLELLKEKNLIEEKEGAIWFKSKDEDKDRVLRKSDGSYTYFASDIAYHLDKYQRGYKK AIDLWGADHHGYIPRLKAALEALDIPQDWLSVELFQIVKLFENGQEVRMSKRTGKMLKLIDVIEDIGADNLRFMFLTKKA DTPLDIDINLVKAQNSENPVFYVQYAYARTMGIKRQLKEPFVFGFYKDKYTYEEEELDLIKRILSSKDVLFEGVIKKDPS LVVKLSLDIAKSFHKFYNTHKVITSDEITTKKRISLVYATQKIFDIIFDILSIKAPEMM
Specific function: Unknown
COG id: COG0018
COG function: function code J; Arginyl-tRNA synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family [H]
Homologues:
Organism=Homo sapiens, GI15149476, Length=320, Percent_Identity=26.25, Blast_Score=73, Evalue=6e-13, Organism=Escherichia coli, GI1788184, Length=607, Percent_Identity=23.2289950576606, Blast_Score=94, Evalue=2e-20, Organism=Saccharomyces cerevisiae, GI6320548, Length=564, Percent_Identity=21.0992907801418, Blast_Score=82, Evalue=2e-16, Organism=Saccharomyces cerevisiae, GI6321883, Length=226, Percent_Identity=25.6637168141593, Blast_Score=70, Evalue=6e-13, Organism=Drosophila melanogaster, GI18859963, Length=574, Percent_Identity=24.9128919860627, Blast_Score=79, Evalue=9e-15, Organism=Drosophila melanogaster, GI28571570, Length=285, Percent_Identity=29.1228070175439, Blast_Score=69, Evalue=7e-12,
Paralogues:
None
Copy number: 789 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001412 - InterPro: IPR001278 - InterPro: IPR015945 - InterPro: IPR005148 - InterPro: IPR008909 - InterPro: IPR014729 - InterPro: IPR009080 [H]
Pfam domain/function: PF03485 Arg_tRNA_synt_N; PF05746 DALR_1; PF00750 tRNA-synt_1d [H]
EC number: =6.1.1.19 [H]
Molecular weight: Translated: 62658; Mature: 62658
Theoretical pI: Translated: 6.39; Mature: 6.39
Prosite motif: PS00178 AA_TRNA_LIGASE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQLIKEIVQKTIKNLYDVEIEPQIQLPKEESYGNFASNIAFILSKALKQKPQDIAITIA CHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEE DNLKNLPHFEKVEALNGFVNMKLSSVFYEGLLFEFLENPINYIKDDAIFEAFGIKKEDKI CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC NLEYVSANPTGPLHLGHGRGAVIGDVLYRLFRFFDIKVDREYYINDAGNQVNLLAKSVMH EEEEEECCCCCCEEECCCCCHHHHHHHHHHHHHHHEEECCEEEECCCCCHHHHHHHHHHH YINQDLYPFPEDGYKGDYIKDIAEAFLKEHNKSNINLEINLERVKDFAISKMMEDIKNTL HHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHH KLLNVEFDIYFSEKTLKDKVEKVLELLKEKNLIEEKEGAIWFKSKDEDKDRVLRKSDGSY HHHEEEEEEEECCHHHHHHHHHHHHHHHHCCCHHHCCCEEEECCCCCCHHHHHHCCCCCE TYFASDIAYHLDKYQRGYKKAIDLWGADHHGYIPRLKAALEALDIPQDWLSVELFQIVKL EEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHH FENGQEVRMSKRTGKMLKLIDVIEDIGADNLRFMFLTKKADTPLDIDINLVKAQNSENPV HHCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCEEEEEEEEECCCCCCE FYVQYAYARTMGIKRQLKEPFVFGFYKDKYTYEEEELDLIKRILSSKDVLFEGVIKKDPS EEEEEHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCC LVVKLSLDIAKSFHKFYNTHKVITSDEITTKKRISLVYATQKIFDIIFDILSIKAPEMM EEEEEEHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MKQLIKEIVQKTIKNLYDVEIEPQIQLPKEESYGNFASNIAFILSKALKQKPQDIAITIA CHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEE DNLKNLPHFEKVEALNGFVNMKLSSVFYEGLLFEFLENPINYIKDDAIFEAFGIKKEDKI CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC NLEYVSANPTGPLHLGHGRGAVIGDVLYRLFRFFDIKVDREYYINDAGNQVNLLAKSVMH EEEEEECCCCCCEEECCCCCHHHHHHHHHHHHHHHEEECCEEEECCCCCHHHHHHHHHHH YINQDLYPFPEDGYKGDYIKDIAEAFLKEHNKSNINLEINLERVKDFAISKMMEDIKNTL HHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHH KLLNVEFDIYFSEKTLKDKVEKVLELLKEKNLIEEKEGAIWFKSKDEDKDRVLRKSDGSY HHHEEEEEEEECCHHHHHHHHHHHHHHHHCCCHHHCCCEEEECCCCCCHHHHHHCCCCCE TYFASDIAYHLDKYQRGYKKAIDLWGADHHGYIPRLKAALEALDIPQDWLSVELFQIVKL EEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHH FENGQEVRMSKRTGKMLKLIDVIEDIGADNLRFMFLTKKADTPLDIDINLVKAQNSENPV HHCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCEEEEEEEEECCCCCCE FYVQYAYARTMGIKRQLKEPFVFGFYKDKYTYEEEELDLIKRILSSKDVLFEGVIKKDPS EEEEEHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCC LVVKLSLDIAKSFHKFYNTHKVITSDEITTKKRISLVYATQKIFDIIFDILSIKAPEMM EEEEEEHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9537320 [H]