Definition Hydrogenobaculum sp. Y04AAS1 chromosome, complete genome.
Accession NC_011126
Length 1,559,514

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The map label for this gene is 195952791

Identifier: 195952791

GI number: 195952791

Start: 357620

End: 358036

Strand: Direct

Name: 195952791

Synonym: HY04AAS1_0413

Alternate gene names: NA

Gene position: 357620-358036 (Clockwise)

Preceding gene: 195952790

Following gene: 195952792

Centisome position: 22.93

GC content: 32.37

Gene sequence:

>417_bases
ATGATGTTTCTTCTTTTAAAAGCGTTTCACATTATGTCTATAATTTTATGGGTTGGTGCTTCTTCGTCTTTGGGACTTTT
TACAATAGTGGCTTACGAAAAAGGTATAAACTGCGATTACGATTATATGTGGAGATTTTATAAAAAGCTTGTAAACTTAG
AGCTTTTTGCCTTTTTTTTGGTGATATTTTTTGGCATAGGTATGTATTCTATGCTTGGATTTAAACCAATCCCTTGGCTT
ATGATGAAACTTCCCATAGTTTTTGGTTTTTTCTTACCAATGGAAGCCCTAAACGTATATTTTATACATGTAAAAAACGA
TATAAAAACCTACGGAAAGTTTATAAAGATAGTAAGCCCGTTCTTGATAATAGCTGGTATATGTGTGATACTTCTGGCAG
TTATAAGACCCTCTTGA

Upstream 100 bases:

>100_bases
TTTTTGTACCTCTTTACATGCTAAAATCTTTTGCTATTAGATTTGGCGATGAGTATATATTAAAACAAACTTATCTAGAA
CCATTTCTAAAGGAGCTTAT

Downstream 100 bases:

>100_bases
GGAGTATATATGAAACAACTAATAAAAGAAATTGTTCAAAAAACCATCAAAAATTTGTACGATGTTGAGATAGAACCCCA
GATACAGCTTCCAAAAGAAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 138; Mature: 138

Protein sequence:

>138_residues
MMFLLLKAFHIMSIILWVGASSSLGLFTIVAYEKGINCDYDYMWRFYKKLVNLELFAFFLVIFFGIGMYSMLGFKPIPWL
MMKLPIVFGFFLPMEALNVYFIHVKNDIKTYGKFIKIVSPFLIIAGICVILLAVIRPS

Sequences:

>Translated_138_residues
MMFLLLKAFHIMSIILWVGASSSLGLFTIVAYEKGINCDYDYMWRFYKKLVNLELFAFFLVIFFGIGMYSMLGFKPIPWL
MMKLPIVFGFFLPMEALNVYFIHVKNDIKTYGKFIKIVSPFLIIAGICVILLAVIRPS
>Mature_138_residues
MMFLLLKAFHIMSIILWVGASSSLGLFTIVAYEKGINCDYDYMWRFYKKLVNLELFAFFLVIFFGIGMYSMLGFKPIPWL
MMKLPIVFGFFLPMEALNVYFIHVKNDIKTYGKFIKIVSPFLIIAGICVILLAVIRPS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15989; Mature: 15989

Theoretical pI: Translated: 9.78; Mature: 9.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
6.5 %Met     (Translated Protein)
8.0 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
6.5 %Met     (Mature Protein)
8.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMFLLLKAFHIMSIILWVGASSSLGLFTIVAYEKGINCDYDYMWRFYKKLVNLELFAFFL
CHHHHHHHHHHHHHHHHHCCCCCCHHHHHEEHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
VIFFGIGMYSMLGFKPIPWLMMKLPIVFGFFLPMEALNVYFIHVKNDIKTYGKFIKIVSP
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEEECHHHHHHHHHHHHHHH
FLIIAGICVILLAVIRPS
HHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MMFLLLKAFHIMSIILWVGASSSLGLFTIVAYEKGINCDYDYMWRFYKKLVNLELFAFFL
CHHHHHHHHHHHHHHHHHCCCCCCHHHHHEEHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
VIFFGIGMYSMLGFKPIPWLMMKLPIVFGFFLPMEALNVYFIHVKNDIKTYGKFIKIVSP
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEEECHHHHHHHHHHHHHHH
FLIIAGICVILLAVIRPS
HHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA