Definition Hydrogenobaculum sp. Y04AAS1 chromosome, complete genome.
Accession NC_011126
Length 1,559,514

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The map label for this gene is 195952730

Identifier: 195952730

GI number: 195952730

Start: 310247

End: 311593

Strand: Direct

Name: 195952730

Synonym: HY04AAS1_0352

Alternate gene names: NA

Gene position: 310247-311593 (Clockwise)

Preceding gene: 195952729

Following gene: 195952738

Centisome position: 19.89

GC content: 40.01

Gene sequence:

>1347_bases
ATGAGAAAGAAGCTGTTGTTAGCACTCTCGGTTTTTGGTATGGCTATGTTGCCATTTTATAGTGCTGATGCCATCTTGCT
AAAAGCAAATGACAACGAGTTTGCAAACGTAGGTCTGAAGCTTGCTATTTGGGCTCAAAACAACGGTGCCATTACTACCA
ACGACCACAACAGTACAAACTTCAGCATAGAAAACGCAAGAATCTACTTTGCAGGCCAGATAAACCCTATAGTTCAATTT
GGCGCAAACCTTGATTTTGCAGATAATAACGCTTTAGCTCCAGATGGTTCTGCAAGAGCTCATACTGGTGGTATAGGTCC
AAAAACGGGGGCTTTTTCTGGTATAAGAGACGCTTTTATAAACTTTAAATTTATGCCGCAAGCCCAGCTTATGGCGGGCT
TGTTTGTAGACCCATGGTCAAGGGTATCGCTTGGCGATTTGTATTCTTTCATAGTACCCCTTGAAAACTACAACCCCGGC
ATAGGCGAGATAGACGTTGATGGTTCAAAGTTATTGGGAAAATCCGTAGGCTTCATGAATCCAACAATCCCATTTACGCT
TGGTTCTGATGTGGGTAACGCTTACCGGGATGCCGGTATAACCTTGTGGGGTGATATAGGTAAGGATGCCATGATAAAGT
ACTATCTCATGGCTGGTAATGGTAAATACGATTATGAAGCAGGTCAAAACGGTAATAGCAATCTAAAATATGGTTTTAGG
ATAGAATTTACACCTACAATGCTTGGATACAAAGGTACGCCAAGTTTTGTAGATGAAGATACGTTCCTTGGCAAACAAAA
CACATTGACATTTGCTTTTGCCTATCAACAACAAAAGATAGATTGCTCAGGTATATCGTCAAGCAGTATATGTAATAACC
AGACCTCTTCCACCACAGCAAAAGCATATACATTTGACGTATTGTGGGAACAAAAGTTTGGGGATTTTGTGCCAAACTTC
CAAGCTGCATGGCTTGACCAAAAGGATTTAGGGTATGCACAAGCTGGAACATCAGGACCAGTAGCTCAACCAGAAGCCGA
AGGGTATTACCTACAAACACAGCTTTTATACGATCAAGTTGTAGGTTTAGGAAAACCAGCACTCGTGCTAAGATATGAAG
AAGATGAAAACAAAAATTACTATACCTACAATGGCAATTTTGTAACTGGTAAAGTATCTATGACAGATATATTCTTTAAC
TACTATATAGATGGTGAAAATGCAAACATATCTTTAGGTGCTCAAATAGTATCTCCAAACTCTGATTTGAAAAACGCCAC
CGCAAATAATGGCAATCAACTCAAATCCTTCACAGACTGGACACTTGCTTTAAGAACCGTATTTTAA

Upstream 100 bases:

>100_bases
GCCATCTGGCCTCCTTTTTTATTTTTCTTGATCTATATCAATGATTATTAATACCAAATTGTATCAAAATATTGTCATCA
ACTTAATGAAGGAGGTTTTT

Downstream 100 bases:

>100_bases
TTTATTTTTCCCGCCTTTGGCGGGATGTTGTCTTTATACATTTTTGCATAGCTTTGTCTTAGACTGGGCGGATTCAAAGC
CCAGTCTTTTTTAACTTAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 448; Mature: 448

Protein sequence:

>448_residues
MRKKLLLALSVFGMAMLPFYSADAILLKANDNEFANVGLKLAIWAQNNGAITTNDHNSTNFSIENARIYFAGQINPIVQF
GANLDFADNNALAPDGSARAHTGGIGPKTGAFSGIRDAFINFKFMPQAQLMAGLFVDPWSRVSLGDLYSFIVPLENYNPG
IGEIDVDGSKLLGKSVGFMNPTIPFTLGSDVGNAYRDAGITLWGDIGKDAMIKYYLMAGNGKYDYEAGQNGNSNLKYGFR
IEFTPTMLGYKGTPSFVDEDTFLGKQNTLTFAFAYQQQKIDCSGISSSSICNNQTSSTTAKAYTFDVLWEQKFGDFVPNF
QAAWLDQKDLGYAQAGTSGPVAQPEAEGYYLQTQLLYDQVVGLGKPALVLRYEEDENKNYYTYNGNFVTGKVSMTDIFFN
YYIDGENANISLGAQIVSPNSDLKNATANNGNQLKSFTDWTLALRTVF

Sequences:

>Translated_448_residues
MRKKLLLALSVFGMAMLPFYSADAILLKANDNEFANVGLKLAIWAQNNGAITTNDHNSTNFSIENARIYFAGQINPIVQF
GANLDFADNNALAPDGSARAHTGGIGPKTGAFSGIRDAFINFKFMPQAQLMAGLFVDPWSRVSLGDLYSFIVPLENYNPG
IGEIDVDGSKLLGKSVGFMNPTIPFTLGSDVGNAYRDAGITLWGDIGKDAMIKYYLMAGNGKYDYEAGQNGNSNLKYGFR
IEFTPTMLGYKGTPSFVDEDTFLGKQNTLTFAFAYQQQKIDCSGISSSSICNNQTSSTTAKAYTFDVLWEQKFGDFVPNF
QAAWLDQKDLGYAQAGTSGPVAQPEAEGYYLQTQLLYDQVVGLGKPALVLRYEEDENKNYYTYNGNFVTGKVSMTDIFFN
YYIDGENANISLGAQIVSPNSDLKNATANNGNQLKSFTDWTLALRTVF
>Mature_448_residues
MRKKLLLALSVFGMAMLPFYSADAILLKANDNEFANVGLKLAIWAQNNGAITTNDHNSTNFSIENARIYFAGQINPIVQF
GANLDFADNNALAPDGSARAHTGGIGPKTGAFSGIRDAFINFKFMPQAQLMAGLFVDPWSRVSLGDLYSFIVPLENYNPG
IGEIDVDGSKLLGKSVGFMNPTIPFTLGSDVGNAYRDAGITLWGDIGKDAMIKYYLMAGNGKYDYEAGQNGNSNLKYGFR
IEFTPTMLGYKGTPSFVDEDTFLGKQNTLTFAFAYQQQKIDCSGISSSSICNNQTSSTTAKAYTFDVLWEQKFGDFVPNF
QAAWLDQKDLGYAQAGTSGPVAQPEAEGYYLQTQLLYDQVVGLGKPALVLRYEEDENKNYYTYNGNFVTGKVSMTDIFFN
YYIDGENANISLGAQIVSPNSDLKNATANNGNQLKSFTDWTLALRTVF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49074; Mature: 49074

Theoretical pI: Translated: 4.55; Mature: 4.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKKLLLALSVFGMAMLPFYSADAILLKANDNEFANVGLKLAIWAQNNGAITTNDHNSTN
CCCCEEEHHHHHHHHHHCCCCCCEEEEEECCCCEEECCEEEEEEECCCCEEEECCCCCCE
FSIENARIYFAGQINPIVQFGANLDFADNNALAPDGSARAHTGGIGPKTGAFSGIRDAFI
EEEECEEEEEEECCCEEHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHE
NFKFMPQAQLMAGLFVDPWSRVSLGDLYSFIVPLENYNPGIGEIDVDGSKLLGKSVGFMN
EEEECCHHHHHHCEEECCCCCCCHHHHEEEEEEECCCCCCCCEEECCCHHHHHCCCCCCC
PTIPFTLGSDVGNAYRDAGITLWGDIGKDAMIKYYLMAGNGKYDYEAGQNGNSNLKYGFR
CCCCEEECCCCCCHHHHCCEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCCCCEEEEE
IEFTPTMLGYKGTPSFVDEDTFLGKQNTLTFAFAYQQQKIDCSGISSSSICNNQTSSTTA
EEECHHEECCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCEE
KAYTFDVLWEQKFGDFVPNFQAAWLDQKDLGYAQAGTSGPVAQPEAEGYYLQTQLLYDQV
EEEEEEEEEEHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHH
VGLGKPALVLRYEEDENKNYYTYNGNFVTGKVSMTDIFFNYYIDGENANISLGAQIVSPN
HCCCCCEEEEEEECCCCCCEEEECCEEEEEEEEEEEEEEEEEECCCCCCEEEEEEEECCC
SDLKNATANNGNQLKSFTDWTLALRTVF
CCCCCCCCCCCCCCCCHHCEEEEEEECC
>Mature Secondary Structure
MRKKLLLALSVFGMAMLPFYSADAILLKANDNEFANVGLKLAIWAQNNGAITTNDHNSTN
CCCCEEEHHHHHHHHHHCCCCCCEEEEEECCCCEEECCEEEEEEECCCCEEEECCCCCCE
FSIENARIYFAGQINPIVQFGANLDFADNNALAPDGSARAHTGGIGPKTGAFSGIRDAFI
EEEECEEEEEEECCCEEHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHE
NFKFMPQAQLMAGLFVDPWSRVSLGDLYSFIVPLENYNPGIGEIDVDGSKLLGKSVGFMN
EEEECCHHHHHHCEEECCCCCCCHHHHEEEEEEECCCCCCCCEEECCCHHHHHCCCCCCC
PTIPFTLGSDVGNAYRDAGITLWGDIGKDAMIKYYLMAGNGKYDYEAGQNGNSNLKYGFR
CCCCEEECCCCCCHHHHCCEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCCCCEEEEE
IEFTPTMLGYKGTPSFVDEDTFLGKQNTLTFAFAYQQQKIDCSGISSSSICNNQTSSTTA
EEECHHEECCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCEE
KAYTFDVLWEQKFGDFVPNFQAAWLDQKDLGYAQAGTSGPVAQPEAEGYYLQTQLLYDQV
EEEEEEEEEEHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHH
VGLGKPALVLRYEEDENKNYYTYNGNFVTGKVSMTDIFFNYYIDGENANISLGAQIVSPN
HCCCCCEEEEEEECCCCCCEEEECCEEEEEEEEEEEEEEEEEECCCCCCEEEEEEEECCC
SDLKNATANNGNQLKSFTDWTLALRTVF
CCCCCCCCCCCCCCCCHHCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA