| Definition | Hydrogenobaculum sp. Y04AAS1 chromosome, complete genome. |
|---|---|
| Accession | NC_011126 |
| Length | 1,559,514 |
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The map label for this gene is yitW [H]
Identifier: 195952726
GI number: 195952726
Start: 306379
End: 306669
Strand: Direct
Name: yitW [H]
Synonym: HY04AAS1_0348
Alternate gene names: 195952726
Gene position: 306379-306669 (Clockwise)
Preceding gene: 195952725
Following gene: 195952728
Centisome position: 19.65
GC content: 38.14
Gene sequence:
>291_bases ATGGAGAAAGAGATCTATGAAGCATTAAGGCAGGTTATAGATCCAGAAGTGGGATTTGATGTTGTTAGCCTTGGACTAAT TAGAAATATTAAAGTAGAGAATGGTAAAGTCCATATTGTTATGACACTTTCTTCGCCTCAGTGCCCCATATCTGATGTCA TATTAGGGTGGGTAAAGGAATCGGTGATGAATGTAAATGGTGTGCAAGATGTAGATATAGAGCTTACTTTTAATCCACCT TGGAGTATAGAGATGGCCAGCGAGGATATCAAGAAAGCTCTTGGAATATAA
Upstream 100 bases:
>100_bases CGGAGCTTTGTATATAGTAGCTTGTGGTTTTCTACTTGCAGGAGCAGCTTCTTTTTTGACTAACATCTTGTATGTATTGA CTTTAAAATAGGAGGCTCTT
Downstream 100 bases:
>100_bases CGCAATTAAAAGTTATAAATAACATCTTTAAGCTTAGCAATATCCTTTACCACAATGCGATGTTTTTCATCTACATGTAT TGCTCCATTTTGTTTAAACT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 96; Mature: 96
Protein sequence:
>96_residues MEKEIYEALRQVIDPEVGFDVVSLGLIRNIKVENGKVHIVMTLSSPQCPISDVILGWVKESVMNVNGVQDVDIELTFNPP WSIEMASEDIKKALGI
Sequences:
>Translated_96_residues MEKEIYEALRQVIDPEVGFDVVSLGLIRNIKVENGKVHIVMTLSSPQCPISDVILGWVKESVMNVNGVQDVDIELTFNPP WSIEMASEDIKKALGI >Mature_96_residues MEKEIYEALRQVIDPEVGFDVVSLGLIRNIKVENGKVHIVMTLSSPQCPISDVILGWVKESVMNVNGVQDVDIELTFNPP WSIEMASEDIKKALGI
Specific function: May Be Part Of A Multicomponent Oxygenase Involved In Phenylacetyl-CoA Hydroxylation. [C]
COG id: COG2151
COG function: function code R; Predicted metal-sulfur cluster biosynthetic enzyme
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MIP18 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002744 [H]
Pfam domain/function: PF01883 DUF59 [H]
EC number: NA
Molecular weight: Translated: 10681; Mature: 10681
Theoretical pI: Translated: 4.22; Mature: 4.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKEIYEALRQVIDPEVGFDVVSLGLIRNIKVENGKVHIVMTLSSPQCPISDVILGWVKE CCHHHHHHHHHHCCCCCCHHHHHHHHHHEEEECCCEEEEEEEECCCCCCHHHHHHHHHHH SVMNVNGVQDVDIELTFNPPWSIEMASEDIKKALGI HHHCCCCCCEEEEEEEECCCCCEEECHHHHHHHHCC >Mature Secondary Structure MEKEIYEALRQVIDPEVGFDVVSLGLIRNIKVENGKVHIVMTLSSPQCPISDVILGWVKE CCHHHHHHHHHHCCCCCCHHHHHHHHHHEEEECCCEEEEEEEECCCCCCHHHHHHHHHHH SVMNVNGVQDVDIELTFNPPWSIEMASEDIKKALGI HHHCCCCCCEEEEEEEECCCCCEEECHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9353931; 9025291; 9384377 [H]