| Definition | Hydrogenobaculum sp. Y04AAS1 chromosome, complete genome. |
|---|---|
| Accession | NC_011126 |
| Length | 1,559,514 |
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The map label for this gene is 195952725
Identifier: 195952725
GI number: 195952725
Start: 305146
End: 306369
Strand: Direct
Name: 195952725
Synonym: HY04AAS1_0347
Alternate gene names: NA
Gene position: 305146-306369 (Clockwise)
Preceding gene: 195952724
Following gene: 195952726
Centisome position: 19.57
GC content: 31.45
Gene sequence:
>1224_bases ATGAACCAAAGTGCTTTTTTAGCTAAAAACCTATCTACCCCTTTTAGCATAGTATTAAGATATTTCTTGAGTGCTTTTTT ATTCTATGCTACATTTTTCGTTCTTATATTTCAGTTTTTCGAGTCTTTGAAAGGATATTTCTTGTCTTTTCAAATAGCCT TTTTGGCTCATATATTTTTTCTTGGATTTGTGCTAAATACCATTTTTGGGGCAATGTTTCAGCTTTTACCTGTAGCTTTA GAAAGTCCTATATTTTCTGTGCTTCTGGCCAAATTACAATTTTACATATATGAGTCCGGTATAATACTTATGCTATACGG GTTTTATAACGTTAATTTGGATATTCTGGCGCTGGGAGCCTTATTTACGTTCATTAGCATAGCAATTTACTTGTTTAACT TTTTTGCGAGTATTATAGGTTCTTCTCTTAACAAAATAGAAGTGAAATTTTTAACAGTTTCTCATACACTACTTGGTGCT GGCGCTGCCATTGGCTTAGTAATGACGCTTAACATGAGGTTTAATTTTTTATCTATAGATTATGTAGATTACGCTTTTAT GCATATAACATTTATGATTTTTGGATTTATTTTTATGAGCATAATGGGATTAAGCAAAGTTCTATTGCCCATGTTTTCAC TGGCTCACAAATACAGCGATAGACCCTTAAAGGCTGCTTTCTATACTATGTTATTTGGTATCATTAGTTTTGCAATGTCT GTAAAATTACTATGGATAAAAGAGGTATTTTTTGGTATTGTGTTGACTGGAATAGGCATTTACCTAATTCAAGTTTTAGA AATATATAGACATAAGCCAAAAAAGAGGGCTGATATTTACATAAACGGTATGTTTTATTCACATATATTCATTATACTAG GGGTACCGATGTTGCTATATTCTCCTCTATTCTTTGGAATACTAATGTTTATAGGATTTTTGCAAATGTTTATATTATCA AACCTATACAAAATAGTGCCGTTTTTAGTATGGTTTCATAGGTTTTCTCGTCTCGTGGGTAAAAAGAAAGTTCCTATGCT ATCGGATATGCTTAAGAAACCATTGTCCATGTTAAATTATACTTTTTCCTCAACTGGAGTGATTTTGATTACTATTTCTT TAATCTTTAACATCGGAGCTTTGTATATAGTAGCTTGTGGTTTTCTACTTGCAGGAGCAGCTTCTTTTTTGACTAACATC TTGTATGTATTGACTTTAAAATAG
Upstream 100 bases:
>100_bases GAAAACCTATGGGATTGTTTGATAGGTTAGAAGATAAATACAACGTTAGCATGGAAGAGCTACCCGACGGAAAATATAAA ATAGTTTTTACATTAAAAGC
Downstream 100 bases:
>100_bases GAGGCTCTTATGGAGAAAGAGATCTATGAAGCATTAAGGCAGGTTATAGATCCAGAAGTGGGATTTGATGTTGTTAGCCT TGGACTAATTAGAAATATTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 407; Mature: 407
Protein sequence:
>407_residues MNQSAFLAKNLSTPFSIVLRYFLSAFLFYATFFVLIFQFFESLKGYFLSFQIAFLAHIFFLGFVLNTIFGAMFQLLPVAL ESPIFSVLLAKLQFYIYESGIILMLYGFYNVNLDILALGALFTFISIAIYLFNFFASIIGSSLNKIEVKFLTVSHTLLGA GAAIGLVMTLNMRFNFLSIDYVDYAFMHITFMIFGFIFMSIMGLSKVLLPMFSLAHKYSDRPLKAAFYTMLFGIISFAMS VKLLWIKEVFFGIVLTGIGIYLIQVLEIYRHKPKKRADIYINGMFYSHIFIILGVPMLLYSPLFFGILMFIGFLQMFILS NLYKIVPFLVWFHRFSRLVGKKKVPMLSDMLKKPLSMLNYTFSSTGVILITISLIFNIGALYIVACGFLLAGAASFLTNI LYVLTLK
Sequences:
>Translated_407_residues MNQSAFLAKNLSTPFSIVLRYFLSAFLFYATFFVLIFQFFESLKGYFLSFQIAFLAHIFFLGFVLNTIFGAMFQLLPVAL ESPIFSVLLAKLQFYIYESGIILMLYGFYNVNLDILALGALFTFISIAIYLFNFFASIIGSSLNKIEVKFLTVSHTLLGA GAAIGLVMTLNMRFNFLSIDYVDYAFMHITFMIFGFIFMSIMGLSKVLLPMFSLAHKYSDRPLKAAFYTMLFGIISFAMS VKLLWIKEVFFGIVLTGIGIYLIQVLEIYRHKPKKRADIYINGMFYSHIFIILGVPMLLYSPLFFGILMFIGFLQMFILS NLYKIVPFLVWFHRFSRLVGKKKVPMLSDMLKKPLSMLNYTFSSTGVILITISLIFNIGALYIVACGFLLAGAASFLTNI LYVLTLK >Mature_407_residues MNQSAFLAKNLSTPFSIVLRYFLSAFLFYATFFVLIFQFFESLKGYFLSFQIAFLAHIFFLGFVLNTIFGAMFQLLPVAL ESPIFSVLLAKLQFYIYESGIILMLYGFYNVNLDILALGALFTFISIAIYLFNFFASIIGSSLNKIEVKFLTVSHTLLGA GAAIGLVMTLNMRFNFLSIDYVDYAFMHITFMIFGFIFMSIMGLSKVLLPMFSLAHKYSDRPLKAAFYTMLFGIISFAMS VKLLWIKEVFFGIVLTGIGIYLIQVLEIYRHKPKKRADIYINGMFYSHIFIILGVPMLLYSPLFFGILMFIGFLQMFILS NLYKIVPFLVWFHRFSRLVGKKKVPMLSDMLKKPLSMLNYTFSSTGVILITISLIFNIGALYIVACGFLLAGAASFLTNI LYVLTLK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46408; Mature: 46408
Theoretical pI: Translated: 10.06; Mature: 10.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQSAFLAKNLSTPFSIVLRYFLSAFLFYATFFVLIFQFFESLKGYFLSFQIAFLAHIFF CCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGFVLNTIFGAMFQLLPVALESPIFSVLLAKLQFYIYESGIILMLYGFYNVNLDILALGA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEEHHHCCCHHHHHHHH LFTFISIAIYLFNFFASIIGSSLNKIEVKFLTVSHTLLGAGAAIGLVMTLNMRFNFLSID HHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEHHHHHHHHHHHHHHHHEEECCEEEEEHH YVDYAFMHITFMIFGFIFMSIMGLSKVLLPMFSLAHKYSDRPLKAAFYTMLFGIISFAMS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH VKLLWIKEVFFGIVLTGIGIYLIQVLEIYRHKPKKRADIYINGMFYSHIFIILGVPMLLY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHHH SPLFFGILMFIGFLQMFILSNLYKIVPFLVWFHRFSRLVGKKKVPMLSDMLKKPLSMLNY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH TFSSTGVILITISLIFNIGALYIVACGFLLAGAASFLTNILYVLTLK HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNQSAFLAKNLSTPFSIVLRYFLSAFLFYATFFVLIFQFFESLKGYFLSFQIAFLAHIFF CCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGFVLNTIFGAMFQLLPVALESPIFSVLLAKLQFYIYESGIILMLYGFYNVNLDILALGA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEEHHHCCCHHHHHHHH LFTFISIAIYLFNFFASIIGSSLNKIEVKFLTVSHTLLGAGAAIGLVMTLNMRFNFLSID HHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEHHHHHHHHHHHHHHHHEEECCEEEEEHH YVDYAFMHITFMIFGFIFMSIMGLSKVLLPMFSLAHKYSDRPLKAAFYTMLFGIISFAMS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH VKLLWIKEVFFGIVLTGIGIYLIQVLEIYRHKPKKRADIYINGMFYSHIFIILGVPMLLY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHHH SPLFFGILMFIGFLQMFILSNLYKIVPFLVWFHRFSRLVGKKKVPMLSDMLKKPLSMLNY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH TFSSTGVILITISLIFNIGALYIVACGFLLAGAASFLTNILYVLTLK HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9537320 [H]