Definition Hydrogenobaculum sp. Y04AAS1 chromosome, complete genome.
Accession NC_011126
Length 1,559,514

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The map label for this gene is 195952725

Identifier: 195952725

GI number: 195952725

Start: 305146

End: 306369

Strand: Direct

Name: 195952725

Synonym: HY04AAS1_0347

Alternate gene names: NA

Gene position: 305146-306369 (Clockwise)

Preceding gene: 195952724

Following gene: 195952726

Centisome position: 19.57

GC content: 31.45

Gene sequence:

>1224_bases
ATGAACCAAAGTGCTTTTTTAGCTAAAAACCTATCTACCCCTTTTAGCATAGTATTAAGATATTTCTTGAGTGCTTTTTT
ATTCTATGCTACATTTTTCGTTCTTATATTTCAGTTTTTCGAGTCTTTGAAAGGATATTTCTTGTCTTTTCAAATAGCCT
TTTTGGCTCATATATTTTTTCTTGGATTTGTGCTAAATACCATTTTTGGGGCAATGTTTCAGCTTTTACCTGTAGCTTTA
GAAAGTCCTATATTTTCTGTGCTTCTGGCCAAATTACAATTTTACATATATGAGTCCGGTATAATACTTATGCTATACGG
GTTTTATAACGTTAATTTGGATATTCTGGCGCTGGGAGCCTTATTTACGTTCATTAGCATAGCAATTTACTTGTTTAACT
TTTTTGCGAGTATTATAGGTTCTTCTCTTAACAAAATAGAAGTGAAATTTTTAACAGTTTCTCATACACTACTTGGTGCT
GGCGCTGCCATTGGCTTAGTAATGACGCTTAACATGAGGTTTAATTTTTTATCTATAGATTATGTAGATTACGCTTTTAT
GCATATAACATTTATGATTTTTGGATTTATTTTTATGAGCATAATGGGATTAAGCAAAGTTCTATTGCCCATGTTTTCAC
TGGCTCACAAATACAGCGATAGACCCTTAAAGGCTGCTTTCTATACTATGTTATTTGGTATCATTAGTTTTGCAATGTCT
GTAAAATTACTATGGATAAAAGAGGTATTTTTTGGTATTGTGTTGACTGGAATAGGCATTTACCTAATTCAAGTTTTAGA
AATATATAGACATAAGCCAAAAAAGAGGGCTGATATTTACATAAACGGTATGTTTTATTCACATATATTCATTATACTAG
GGGTACCGATGTTGCTATATTCTCCTCTATTCTTTGGAATACTAATGTTTATAGGATTTTTGCAAATGTTTATATTATCA
AACCTATACAAAATAGTGCCGTTTTTAGTATGGTTTCATAGGTTTTCTCGTCTCGTGGGTAAAAAGAAAGTTCCTATGCT
ATCGGATATGCTTAAGAAACCATTGTCCATGTTAAATTATACTTTTTCCTCAACTGGAGTGATTTTGATTACTATTTCTT
TAATCTTTAACATCGGAGCTTTGTATATAGTAGCTTGTGGTTTTCTACTTGCAGGAGCAGCTTCTTTTTTGACTAACATC
TTGTATGTATTGACTTTAAAATAG

Upstream 100 bases:

>100_bases
GAAAACCTATGGGATTGTTTGATAGGTTAGAAGATAAATACAACGTTAGCATGGAAGAGCTACCCGACGGAAAATATAAA
ATAGTTTTTACATTAAAAGC

Downstream 100 bases:

>100_bases
GAGGCTCTTATGGAGAAAGAGATCTATGAAGCATTAAGGCAGGTTATAGATCCAGAAGTGGGATTTGATGTTGTTAGCCT
TGGACTAATTAGAAATATTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 407; Mature: 407

Protein sequence:

>407_residues
MNQSAFLAKNLSTPFSIVLRYFLSAFLFYATFFVLIFQFFESLKGYFLSFQIAFLAHIFFLGFVLNTIFGAMFQLLPVAL
ESPIFSVLLAKLQFYIYESGIILMLYGFYNVNLDILALGALFTFISIAIYLFNFFASIIGSSLNKIEVKFLTVSHTLLGA
GAAIGLVMTLNMRFNFLSIDYVDYAFMHITFMIFGFIFMSIMGLSKVLLPMFSLAHKYSDRPLKAAFYTMLFGIISFAMS
VKLLWIKEVFFGIVLTGIGIYLIQVLEIYRHKPKKRADIYINGMFYSHIFIILGVPMLLYSPLFFGILMFIGFLQMFILS
NLYKIVPFLVWFHRFSRLVGKKKVPMLSDMLKKPLSMLNYTFSSTGVILITISLIFNIGALYIVACGFLLAGAASFLTNI
LYVLTLK

Sequences:

>Translated_407_residues
MNQSAFLAKNLSTPFSIVLRYFLSAFLFYATFFVLIFQFFESLKGYFLSFQIAFLAHIFFLGFVLNTIFGAMFQLLPVAL
ESPIFSVLLAKLQFYIYESGIILMLYGFYNVNLDILALGALFTFISIAIYLFNFFASIIGSSLNKIEVKFLTVSHTLLGA
GAAIGLVMTLNMRFNFLSIDYVDYAFMHITFMIFGFIFMSIMGLSKVLLPMFSLAHKYSDRPLKAAFYTMLFGIISFAMS
VKLLWIKEVFFGIVLTGIGIYLIQVLEIYRHKPKKRADIYINGMFYSHIFIILGVPMLLYSPLFFGILMFIGFLQMFILS
NLYKIVPFLVWFHRFSRLVGKKKVPMLSDMLKKPLSMLNYTFSSTGVILITISLIFNIGALYIVACGFLLAGAASFLTNI
LYVLTLK
>Mature_407_residues
MNQSAFLAKNLSTPFSIVLRYFLSAFLFYATFFVLIFQFFESLKGYFLSFQIAFLAHIFFLGFVLNTIFGAMFQLLPVAL
ESPIFSVLLAKLQFYIYESGIILMLYGFYNVNLDILALGALFTFISIAIYLFNFFASIIGSSLNKIEVKFLTVSHTLLGA
GAAIGLVMTLNMRFNFLSIDYVDYAFMHITFMIFGFIFMSIMGLSKVLLPMFSLAHKYSDRPLKAAFYTMLFGIISFAMS
VKLLWIKEVFFGIVLTGIGIYLIQVLEIYRHKPKKRADIYINGMFYSHIFIILGVPMLLYSPLFFGILMFIGFLQMFILS
NLYKIVPFLVWFHRFSRLVGKKKVPMLSDMLKKPLSMLNYTFSSTGVILITISLIFNIGALYIVACGFLLAGAASFLTNI
LYVLTLK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46408; Mature: 46408

Theoretical pI: Translated: 10.06; Mature: 10.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure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HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]