Definition Hydrogenobaculum sp. Y04AAS1 chromosome, complete genome.
Accession NC_011126
Length 1,559,514

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The map label for this gene is 195952616

Identifier: 195952616

GI number: 195952616

Start: 211665

End: 212078

Strand: Direct

Name: 195952616

Synonym: HY04AAS1_0236

Alternate gene names: NA

Gene position: 211665-212078 (Clockwise)

Preceding gene: 195952615

Following gene: 195952617

Centisome position: 13.57

GC content: 33.33

Gene sequence:

>414_bases
ATGGGTAAGGTTATAAGATTTAACTCTGATGACGATAGTGAAAAGATAGAACAAGAACAACCTCCTATAGACCAGCAATC
AGTTGAAATGCCTCAGTTTCTACAAGAATTAAGAGAATATATACTTGGATATTATCCTAATACTATAAGCGATATACTTG
GCTTTAGCGGTTTTATCAAAAACGACAACCCTTATGTATTCGTGGGATATGTTGCATGGCAAGATAAAAAAGGAAGCTAT
TATACCACACCTTTGATAGCTATGTTTAGAAATCAAGACAAGAGGTTTTCTTTTTTAAACGCCAAGAACCACTATTTTGA
TCCTACGGTGTTAAAAACAGACATTGAAAACTCGGGTATAAAAATAGATGAGATTTACAAACATCTTGACAAAGAGTTAA
AAAAGCCAACCTAA

Upstream 100 bases:

>100_bases
GAGGCTTTTGAAAAAGGTATATTAAAAAGAAAAGATAAAATTCTATTAACGGCTATGGGCGGAGGACTTACATGGGGAGC
TAGCGTTTTGGAGTTTTAAG

Downstream 100 bases:

>100_bases
AACACTGCTAAAAATAAAGGTAGCTTGGTCATAACTTATAAAATCTAAGAATGTAAATTTTTTTCTTATGGAAAAAGATA
GATTGCCAAAAGGACAAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 137; Mature: 136

Protein sequence:

>137_residues
MGKVIRFNSDDDSEKIEQEQPPIDQQSVEMPQFLQELREYILGYYPNTISDILGFSGFIKNDNPYVFVGYVAWQDKKGSY
YTTPLIAMFRNQDKRFSFLNAKNHYFDPTVLKTDIENSGIKIDEIYKHLDKELKKPT

Sequences:

>Translated_137_residues
MGKVIRFNSDDDSEKIEQEQPPIDQQSVEMPQFLQELREYILGYYPNTISDILGFSGFIKNDNPYVFVGYVAWQDKKGSY
YTTPLIAMFRNQDKRFSFLNAKNHYFDPTVLKTDIENSGIKIDEIYKHLDKELKKPT
>Mature_136_residues
GKVIRFNSDDDSEKIEQEQPPIDQQSVEMPQFLQELREYILGYYPNTISDILGFSGFIKNDNPYVFVGYVAWQDKKGSYY
TTPLIAMFRNQDKRFSFLNAKNHYFDPTVLKTDIENSGIKIDEIYKHLDKELKKPT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16101; Mature: 15970

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKVIRFNSDDDSEKIEQEQPPIDQQSVEMPQFLQELREYILGYYPNTISDILGFSGFIK
CCCEEEECCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHCCCCEEE
NDNPYVFVGYVAWQDKKGSYYTTPLIAMFRNQDKRFSFLNAKNHYFDPTVLKTDIENSGI
CCCCEEEEEEEEEECCCCCEECHHHHHHHCCCCCCEEEECCCCCCCCCEEEEECCCCCCE
KIDEIYKHLDKELKKPT
EHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
GKVIRFNSDDDSEKIEQEQPPIDQQSVEMPQFLQELREYILGYYPNTISDILGFSGFIK
CCEEEECCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHCCCCEEE
NDNPYVFVGYVAWQDKKGSYYTTPLIAMFRNQDKRFSFLNAKNHYFDPTVLKTDIENSGI
CCCCEEEEEEEEEECCCCCEECHHHHHHHCCCCCCEEEECCCCCCCCCEEEEECCCCCCE
KIDEIYKHLDKELKKPT
EHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA