| Definition | Hydrogenobaculum sp. Y04AAS1 chromosome, complete genome. |
|---|---|
| Accession | NC_011126 |
| Length | 1,559,514 |
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The map label for this gene is fabH [H]
Identifier: 195952615
GI number: 195952615
Start: 210752
End: 211663
Strand: Direct
Name: fabH [H]
Synonym: HY04AAS1_0235
Alternate gene names: 195952615
Gene position: 210752-211663 (Clockwise)
Preceding gene: 195952614
Following gene: 195952616
Centisome position: 13.51
GC content: 36.95
Gene sequence:
>912_bases ATGGGCGTATCTATAAAGTCTATAGGCATTTACGTGCCTTCTCATGTTGTTACCAACAAGGATTTGGAAAAAAACATTGA TACTTCCGATGAGTGGATTACTACGAGAACTGGTATAAAAAGAAGACACGTAGCAAAAGATGAGTCTATATACGATATGG CTGTGAAAGCTGGTAAGATGGCTCTTGAAAAAGCCGGTTTAGAAGAAGTAGATCTTATAATAGTAGCCACTTTAAGCCCA GAGATGCTTTTTCCAGCTGTAGCTTGTGTAGTTCAACAGCATATAAAATCAAGATTTGCTTTTGATATATCGGCTGCTTG TAGTGGGTTTTTGTATGGGCTTGATATAGCAAAATCTTACATAGAAAGCTCAAATGTAAATTCAATACTTCTTATAGGAG TAGAAAAACTTTCTTCTATAGTGGATTGGACCGATAGGAGCACCTGTGTGCTTTTTGGAGATGGGGCCGGTGCTGCTGTA ATTACAAAAGGAGAAGGGGATATATTATCAAGTGTTATGTTTTCCGATGGTAAGTACAAGGATCTTCTTTATGCTGAGAA ATGCGATTTTCTAAAGATGAACGGAAAAGAAGTGTTTAAATACGCTGTAAGAAACATGGAAGCTGCTTGTAGAATGGCTA TTGAAAAGGCAAACGTTAGCATAGATGAAATATCTCTTGTGATACCTCATCAGGCAAACATACGTATAATAAACTCGTTG GCGCAAAAACTTGGTGTTCCAAGTTCAAAAGTTTATGTAAACATACAAGAGTATGCAAACACTAGTGCTGCTTCTATACC TATAGCTATGTATGAGGCTTTTGAAAAAGGTATATTAAAAAGAAAAGATAAAATTCTATTAACGGCTATGGGCGGAGGAC TTACATGGGGAGCTAGCGTTTTGGAGTTTTAA
Upstream 100 bases:
>100_bases ACGCTATAAAGATAGCTAGAGCATTTTTATCTCACCACTTCAACGAAAGAATGAAAGAAAACTTTGTAAAATATATAGAA CCAGTCTTAAAGGAGCAATA
Downstream 100 bases:
>100_bases GATGGGTAAGGTTATAAGATTTAACTCTGATGACGATAGTGAAAAGATAGAACAAGAACAACCTCCTATAGACCAGCAAT CAGTTGAAATGCCTCAGTTT
Product: 3-oxoacyl-(acyl-carrier-protein) synthase III
Products: NA
Alternate protein names: 3-oxoacyl-[acyl-carrier-protein] synthase III; Beta-ketoacyl-ACP synthase III; KAS III [H]
Number of amino acids: Translated: 303; Mature: 302
Protein sequence:
>303_residues MGVSIKSIGIYVPSHVVTNKDLEKNIDTSDEWITTRTGIKRRHVAKDESIYDMAVKAGKMALEKAGLEEVDLIIVATLSP EMLFPAVACVVQQHIKSRFAFDISAACSGFLYGLDIAKSYIESSNVNSILLIGVEKLSSIVDWTDRSTCVLFGDGAGAAV ITKGEGDILSSVMFSDGKYKDLLYAEKCDFLKMNGKEVFKYAVRNMEAACRMAIEKANVSIDEISLVIPHQANIRIINSL AQKLGVPSSKVYVNIQEYANTSAASIPIAMYEAFEKGILKRKDKILLTAMGGGLTWGASVLEF
Sequences:
>Translated_303_residues MGVSIKSIGIYVPSHVVTNKDLEKNIDTSDEWITTRTGIKRRHVAKDESIYDMAVKAGKMALEKAGLEEVDLIIVATLSP EMLFPAVACVVQQHIKSRFAFDISAACSGFLYGLDIAKSYIESSNVNSILLIGVEKLSSIVDWTDRSTCVLFGDGAGAAV ITKGEGDILSSVMFSDGKYKDLLYAEKCDFLKMNGKEVFKYAVRNMEAACRMAIEKANVSIDEISLVIPHQANIRIINSL AQKLGVPSSKVYVNIQEYANTSAASIPIAMYEAFEKGILKRKDKILLTAMGGGLTWGASVLEF >Mature_302_residues GVSIKSIGIYVPSHVVTNKDLEKNIDTSDEWITTRTGIKRRHVAKDESIYDMAVKAGKMALEKAGLEEVDLIIVATLSPE MLFPAVACVVQQHIKSRFAFDISAACSGFLYGLDIAKSYIESSNVNSILLIGVEKLSSIVDWTDRSTCVLFGDGAGAAVI TKGEGDILSSVMFSDGKYKDLLYAEKCDFLKMNGKEVFKYAVRNMEAACRMAIEKANVSIDEISLVIPHQANIRIINSLA QKLGVPSSKVYVNIQEYANTSAASIPIAMYEAFEKGILKRKDKILLTAMGGGLTWGASVLEF
Specific function: Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the
COG id: COG0332
COG function: function code I; 3-oxoacyl-[acyl-carrier-protein] synthase III
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the fabH family [H]
Homologues:
Organism=Escherichia coli, GI1787333, Length=317, Percent_Identity=42.2712933753943, Blast_Score=247, Evalue=8e-67,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013751 - InterPro: IPR013747 - InterPro: IPR004655 - InterPro: IPR016039 - InterPro: IPR016038 [H]
Pfam domain/function: PF08545 ACP_syn_III; PF08541 ACP_syn_III_C [H]
EC number: =2.3.1.180 [H]
Molecular weight: Translated: 33039; Mature: 32907
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGVSIKSIGIYVPSHVVTNKDLEKNIDTSDEWITTRTGIKRRHVAKDESIYDMAVKAGKM CCCEEEEEEEEECCCEECCCCHHCCCCCCCCEEEECCCCHHHHCCCCCHHHHHHHHHHHH ALEKAGLEEVDLIIVATLSPEMLFPAVACVVQQHIKSRFAFDISAACSGFLYGLDIAKSY HHHHCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHCEEHHHHHHHHHHHHHHHHHH IESSNVNSILLIGVEKLSSIVDWTDRSTCVLFGDGAGAAVITKGEGDILSSVMFSDGKYK HHCCCCCEEEEEEHHHHHHHHCCCCCCEEEEEECCCCEEEEECCCCHHHHHHHHCCCCCH DLLYAEKCDFLKMNGKEVFKYAVRNMEAACRMAIEKANVSIDEISLVIPHQANIRIINSL HHHHHHCCCEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEEEECCCCCHHHHHHH AQKLGVPSSKVYVNIQEYANTSAASIPIAMYEAFEKGILKRKDKILLTAMGGGLTWGASV HHHHCCCCCCEEEEEHHHCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHH LEF HCC >Mature Secondary Structure GVSIKSIGIYVPSHVVTNKDLEKNIDTSDEWITTRTGIKRRHVAKDESIYDMAVKAGKM CCEEEEEEEEECCCEECCCCHHCCCCCCCCEEEECCCCHHHHCCCCCHHHHHHHHHHHH ALEKAGLEEVDLIIVATLSPEMLFPAVACVVQQHIKSRFAFDISAACSGFLYGLDIAKSY HHHHCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHCEEHHHHHHHHHHHHHHHHHH IESSNVNSILLIGVEKLSSIVDWTDRSTCVLFGDGAGAAVITKGEGDILSSVMFSDGKYK HHCCCCCEEEEEEHHHHHHHHCCCCCCEEEEEECCCCEEEEECCCCHHHHHHHHCCCCCH DLLYAEKCDFLKMNGKEVFKYAVRNMEAACRMAIEKANVSIDEISLVIPHQANIRIINSL HHHHHHCCCEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEEEECCCCCHHHHHHH AQKLGVPSSKVYVNIQEYANTSAASIPIAMYEAFEKGILKRKDKILLTAMGGGLTWGASV HHHHCCCCCCEEEEEHHHCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHH LEF HCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9537320 [H]