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The map label for this gene is rpmF

Identifier: 195952613

GI number: 195952613

Start: 209539

End: 209721

Strand: Direct

Name: rpmF

Synonym: HY04AAS1_0233

Alternate gene names: 195952613

Gene position: 209539-209721 (Clockwise)

Preceding gene: 195952612

Following gene: 195952614

Centisome position: 13.44

GC content: 39.89

Gene sequence:

>183_bases
ATGGCGGTACCAAAGCGTAGGACTTCTCGTTGGAGAAGAAACCAAAGAAGGGCGCAAGCTTTTTTTGCGAAGCTAAAATC
TTTTAATATGGTAAAATGTCCAAATTGTGGAGAATTTGCAATGCCACACAGGGCTTGTCCTTACTGCGGTTATTACAGAG
ATAAACAAGTATTAGAAGTGTAA

Upstream 100 bases:

>100_bases
AAATTTTTATGTGAAGAGTCTTGTAGTTTGCCATCAAAAGTTGAGCAAGGAAACAAAAGTTTTGCTATACTTAAAGAGTT
ACTAACTAAGGAGGAAAAAA

Downstream 100 bases:

>100_bases
TTTAGCTATAAATGGAAAGCTTTCGTATAGCGCTTGACTGTATGGGGGGTGATTATGCCCCCGATGAGATAGTAAAAGGT
GGTATACTAGCTTTAGATGA

Product: 50S ribosomal protein L32

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 60; Mature: 59

Protein sequence:

>60_residues
MAVPKRRTSRWRRNQRRAQAFFAKLKSFNMVKCPNCGEFAMPHRACPYCGYYRDKQVLEV

Sequences:

>Translated_60_residues
MAVPKRRTSRWRRNQRRAQAFFAKLKSFNMVKCPNCGEFAMPHRACPYCGYYRDKQVLEV
>Mature_59_residues
AVPKRRTSRWRRNQRRAQAFFAKLKSFNMVKCPNCGEFAMPHRACPYCGYYRDKQVLEV

Specific function: Unknown

COG id: COG0333

COG function: function code J; Ribosomal protein L32

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L32P family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL32_HYDS0 (B4U714)

Other databases:

- EMBL:   CP001130
- RefSeq:   YP_002120903.1
- ProteinModelPortal:   B4U714
- SMR:   B4U714
- GeneID:   6743023
- GenomeReviews:   CP001130_GR
- KEGG:   hya:HY04AAS1_0233
- HOGENOM:   HBG728381
- OMA:   YGKKQVF
- ProtClustDB:   PRK12286
- GO:   GO:0006412
- HAMAP:   MF_00340
- InterPro:   IPR002677
- InterPro:   IPR011332
- TIGRFAMs:   TIGR01031

Pfam domain/function: PF01783 Ribosomal_L32p; SSF57829 Ribosomal_zn-bd

EC number: NA

Molecular weight: Translated: 7200; Mature: 7068

Theoretical pI: Translated: 11.00; Mature: 11.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.7 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
11.7 %Cys+Met (Translated Protein)
6.8 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
10.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVPKRRTSRWRRNQRRAQAFFAKLKSFNMVKCPNCGEFAMPHRACPYCGYYRDKQVLEV
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AVPKRRTSRWRRNQRRAQAFFAKLKSFNMVKCPNCGEFAMPHRACPYCGYYRDKQVLEV
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA