Definition Hydrogenobaculum sp. Y04AAS1 chromosome, complete genome.
Accession NC_011126
Length 1,559,514

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The map label for this gene is 195952612

Identifier: 195952612

GI number: 195952612

Start: 209043

End: 209558

Strand: Direct

Name: 195952612

Synonym: HY04AAS1_0232

Alternate gene names: NA

Gene position: 209043-209558 (Clockwise)

Preceding gene: 195952611

Following gene: 195952613

Centisome position: 13.4

GC content: 33.14

Gene sequence:

>516_bases
ATGGAGATTTTAAACCTTGTAGATATTTTTAAAAGCCAAAAAACTTACTCCTTTGAAGAGGATATAAAAAAGGATTTTTG
GAAAGATTTTTTACCTGAGGATATAGAAAGTGTTGAGGCCAATGTGAAGATCAATATATCACCAAAAGGTTATATGAGAT
ATGAGCTATCTTTGAAGTTAGAGGCTAAGGTAAGGGCTTTTTGTTCTGTTTGCCTTAAGGAGTTTGGATTTGATATAGTT
TTGGACGAGGTTTTTGAGCTTTTAGATAAAAGTTTAGAAACATATTCAAAATCACACATGTTAAAAGAAGAAGAATTCTA
CACTTACTACATAGACCAGGAGGAGTTTGATCCTTCTGAGGTTGTTTTGGATGCTCTTATAGGTGCTATGCCTATAAAAT
TTTTATGTGAAGAGTCTTGTAGTTTGCCATCAAAAGTTGAGCAAGGAAACAAAAGTTTTGCTATACTTAAAGAGTTACTA
ACTAAGGAGGAAAAAAATGGCGGTACCAAAGCGTAG

Upstream 100 bases:

>100_bases
GCTATAAAACTTGCCAAAGAGCTTGAAAGTGGGCTCATTGTGACGGTGTTTCCAGATGGCGGGGATAGATATCTATCCAC
TAGAGTGTGGGGTAAGTGAT

Downstream 100 bases:

>100_bases
GACTTCTCGTTGGAGAAGAAACCAAAGAAGGGCGCAAGCTTTTTTTGCGAAGCTAAAATCTTTTAATATGGTAAAATGTC
CAAATTGTGGAGAATTTGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 171; Mature: 171

Protein sequence:

>171_residues
MEILNLVDIFKSQKTYSFEEDIKKDFWKDFLPEDIESVEANVKINISPKGYMRYELSLKLEAKVRAFCSVCLKEFGFDIV
LDEVFELLDKSLETYSKSHMLKEEEFYTYYIDQEEFDPSEVVLDALIGAMPIKFLCEESCSLPSKVEQGNKSFAILKELL
TKEEKNGGTKA

Sequences:

>Translated_171_residues
MEILNLVDIFKSQKTYSFEEDIKKDFWKDFLPEDIESVEANVKINISPKGYMRYELSLKLEAKVRAFCSVCLKEFGFDIV
LDEVFELLDKSLETYSKSHMLKEEEFYTYYIDQEEFDPSEVVLDALIGAMPIKFLCEESCSLPSKVEQGNKSFAILKELL
TKEEKNGGTKA
>Mature_171_residues
MEILNLVDIFKSQKTYSFEEDIKKDFWKDFLPEDIESVEANVKINISPKGYMRYELSLKLEAKVRAFCSVCLKEFGFDIV
LDEVFELLDKSLETYSKSHMLKEEEFYTYYIDQEEFDPSEVVLDALIGAMPIKFLCEESCSLPSKVEQGNKSFAILKELL
TKEEKNGGTKA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19819; Mature: 19819

Theoretical pI: Translated: 4.33; Mature: 4.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEILNLVDIFKSQKTYSFEEDIKKDFWKDFLPEDIESVEANVKINISPKGYMRYELSLKL
CCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCHHHHHHHCCCEEEEECCCCEEEEEEEEEH
EAKVRAFCSVCLKEFGFDIVLDEVFELLDKSLETYSKSHMLKEEEFYTYYIDQEEFDPSE
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHH
VVLDALIGAMPIKFLCEESCSLPSKVEQGNKSFAILKELLTKEEKNGGTKA
HHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MEILNLVDIFKSQKTYSFEEDIKKDFWKDFLPEDIESVEANVKINISPKGYMRYELSLKL
CCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCHHHHHHHCCCEEEEECCCCEEEEEEEEEH
EAKVRAFCSVCLKEFGFDIVLDEVFELLDKSLETYSKSHMLKEEEFYTYYIDQEEFDPSE
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHH
VVLDALIGAMPIKFLCEESCSLPSKVEQGNKSFAILKELLTKEEKNGGTKA
HHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA