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The map label for this gene is 195952579

Identifier: 195952579

GI number: 195952579

Start: 176413

End: 176925

Strand: Direct

Name: 195952579

Synonym: HY04AAS1_0199

Alternate gene names: NA

Gene position: 176413-176925 (Clockwise)

Preceding gene: 195952578

Following gene: 195952580

Centisome position: 11.31

GC content: 36.84

Gene sequence:

>513_bases
ATGAAAAATCTTAAAAAGATGTTAAAGACTTCAGCATTAGCTGTAGGGCTATTGTCTGTTTTATCGGCTTCTTCTTACGC
TGGTGGTTTTGCATGTGTGGATACTCAAGAGGTAATGCAAAAATCTACCTTTGCCAAATCCCTTGGTAAATCTTTAAATG
AGAAAGTGGTCGAGATAAGACAAAAGCTCAAAAACTATGAAGCAGAGCTTCAAAACCTTCAAAGGGAGATAGAGAGCAAA
GCTATTTCCAAGCAAGCCAAAAAACAGAAGATTAAAGAATACGAAAACGTAAGGTTAAAAGCTTTGGAATATCAGCAAGA
CGCTCAAAAAGAACTCCAAGCTATGCAAGAAAAGGCAGGCAAGGAGTTTACCGAAGGCCTTAAAAATGTGGTTACATCTT
ACGCAAAATCTCATAGCTTAGAAGGCGTCTTTGATTGCAATCAAATGCTATATACTGGTAATCTTGATATAACACCATCT
ATTATAAAAGCCTTAGATAGCGCACACAAATGA

Upstream 100 bases:

>100_bases
GAAAGACAATACGCTTATTAGTTTAAATGCCGGTGAAATAGAGTCTATGATACCTAAAGAAACGTGGTAAAATATTTATA
ATTTTTAAAAGGAGGCAAAA

Downstream 100 bases:

>100_bases
AATTATCTGAAATAGCCTCCTTGCTTGGGGGCATTTCAAGCTATACCGTTGATATAGATGTTGTTGGCGTTAGTTCTGTT
TTATCTCAAAAGCCAAATAC

Product: outer membrane chaperone Skp

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 170; Mature: 170

Protein sequence:

>170_residues
MKNLKKMLKTSALAVGLLSVLSASSYAGGFACVDTQEVMQKSTFAKSLGKSLNEKVVEIRQKLKNYEAELQNLQREIESK
AISKQAKKQKIKEYENVRLKALEYQQDAQKELQAMQEKAGKEFTEGLKNVVTSYAKSHSLEGVFDCNQMLYTGNLDITPS
IIKALDSAHK

Sequences:

>Translated_170_residues
MKNLKKMLKTSALAVGLLSVLSASSYAGGFACVDTQEVMQKSTFAKSLGKSLNEKVVEIRQKLKNYEAELQNLQREIESK
AISKQAKKQKIKEYENVRLKALEYQQDAQKELQAMQEKAGKEFTEGLKNVVTSYAKSHSLEGVFDCNQMLYTGNLDITPS
IIKALDSAHK
>Mature_170_residues
MKNLKKMLKTSALAVGLLSVLSASSYAGGFACVDTQEVMQKSTFAKSLGKSLNEKVVEIRQKLKNYEAELQNLQREIESK
AISKQAKKQKIKEYENVRLKALEYQQDAQKELQAMQEKAGKEFTEGLKNVVTSYAKSHSLEGVFDCNQMLYTGNLDITPS
IIKALDSAHK

Specific function: Unknown

COG id: COG2825

COG function: function code M; Outer membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the skp family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005632 [H]

Pfam domain/function: PF03938 OmpH [H]

EC number: NA

Molecular weight: Translated: 18996; Mature: 18996

Theoretical pI: Translated: 9.80; Mature: 9.80

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNLKKMLKTSALAVGLLSVLSASSYAGGFACVDTQEVMQKSTFAKSLGKSLNEKVVEIR
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
QKLKNYEAELQNLQREIESKAISKQAKKQKIKEYENVRLKALEYQQDAQKELQAMQEKAG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KEFTEGLKNVVTSYAKSHSLEGVFDCNQMLYTGNLDITPSIIKALDSAHK
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCC
>Mature Secondary Structure
MKNLKKMLKTSALAVGLLSVLSASSYAGGFACVDTQEVMQKSTFAKSLGKSLNEKVVEIR
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
QKLKNYEAELQNLQREIESKAISKQAKKQKIKEYENVRLKALEYQQDAQKELQAMQEKAG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KEFTEGLKNVVTSYAKSHSLEGVFDCNQMLYTGNLDITPSIIKALDSAHK
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]